Cyphomyrmex costatus: 108773996
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Entry
108773996 CDS
T11118
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108773996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccoa03041
]
108773996
Spliceosome [BR:
ccoa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108773996
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
108773996
NCBI-ProteinID:
XP_018395496
LinkDB
All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MQMQEAEGADGSPWNNSSGCDEERRPVPKEGKKSNVLPLWGNERTMNLNPLILTNIQSSH
YFKVNLYELKTYHEVIDEIYYKVSHLEPWEKGSRKTAGQTGMCGGRFMQVRGVGAGGIVS
TAYCLLYKLFTLRLTRKQLNGLINHPDSPYIRALGFMYIRYTQPPADLFSWYNDYLEDEE
ELDVKAGGGQVMKMGDILKQFLTKLEWFSTLFPRIPVPIQKDLELRLAERFPQQQVNARN
AKPPITLNSHGKYGNKDGRKDNGNLTLRNQQPRHIPDNETQWGEAERMSQWRARTDEDRK
DKNRERDRDRERLRERDRERARERDRERDRYSRRSNSRDRNRRQRDYKSRSRDRSYRDRS
RDRHRDRDRHRDRRGSPYDYATELARERERQRRERE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgcaggaggctgaaggtgcggatgggtctccatggaataactcgagtggttgc
gatgaggaacgtaggccagttccaaaggagggtaaaaagtcaaatgtgttgccactatgg
ggcaacgaaaggactatgaatttgaatcctttgattcttaccaacatacagtcgtcgcat
tatttcaaggtgaatctgtatgaactcaagacctatcatgaggtgattgatgagatctat
tataaggtctctcacttagaaccatgggaaaaaggcagcagaaagactgcaggccaaact
ggcatgtgtggaggccggttcatgcaggtgcgaggcgtgggagctggcggaattgtttcc
acggcatattgtctattatacaaactcttcactctgaggctaaccagaaagcaactaaat
ggacttattaatcatccggactcaccctatatacgcgctctaggatttatgtacattaga
tatacacagccaccggcagacttgttcagctggtacaacgattatctggaggatgaagag
gagttagatgtaaaggcaggcggcggacaagtgatgaaaatgggcgacattcttaaacaa
ttccttaccaaactagagtggttctctacattatttccacggataccggtaccaatccaa
aaagatttagaactgcggttggccgagcgctttccgcaacagcaggtgaatgcacgaaac
gctaagccgccaatcactctcaatagccacggcaagtatggcaacaaggatggtcgtaag
gacaacggtaacttgacattgcgtaatcagcaaccccgacatattcccgataacgagact
cagtggggtgaggccgagcgtatgagccagtggcgtgccagaaccgatgaggatcgtaag
gacaagaatagagagcgcgatcgcgatcgcgagaggttgcgagagcgtgatagagaaaga
gctcgcgaacgggatcgtgaaagagacaggtatagcagaagatcgaacagtcgtgacaga
aatagaagacagagagattataaaagccgtagcagagacagatcatatagagatcgaagc
agagatcgtcatcgtgatagagaccgacatcgggataggagaggctcaccgtatgactac
gccacagaattggcacgcgagcgcgaaaggcaacgaagggaaagagaataa
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integrated database retrieval system
