Cyphomyrmex costatus: 108774204
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Entry
108774204 CDS
T11118
Name
(RefSeq) E3 ubiquitin-protein ligase Su(dx)
KO
K05633
NEDD4-like E3 ubiquitin-protein ligase WWP1 [EC:
2.3.2.26
]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04120
Ubiquitin mediated proteolysis
ccoa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108774204
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108774204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108774204
04121 Ubiquitin system [BR:
ccoa04121
]
108774204
Enzymes [BR:
ccoa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108774204
Membrane trafficking [BR:
ccoa04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
108774204
Ubiquitin system [BR:
ccoa04121
]
Ubiquitin ligases (E3)
HECT type E3
108774204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
Mycobact_memb
Motif
Other DBs
NCBI-GeneID:
108774204
NCBI-ProteinID:
XP_018395756
LinkDB
All DBs
Position
Unknown
AA seq
1183 aa
AA seq
DB search
MSHCEEDAASPGFHQLSITIEAAILRSSTFLKPNPYIEFSVDDKSPRKTEVSKSTYQPKW
NEEFTILVTPYSQLHFRLLDHSTFRKDTLIGEKRIDLFQVLSHYNGKLENLELTFDLMSE
SKHDSQLSKVGELITVFDGLRIDTTNEMLVNVIEPSCQIQSDGATNDTINNRSILNGGVR
ARMRLHSSDNLASSIYRGLTNIHLSPNYSDGNSQANSNKNVGLSTTISNTDGTVGGNVGS
SANSSNVSTRIVVNGHTILMTDKSMVSPGNRYATDVRTFAGRSAIKELSSANSSEGRTYI
WSNNSNSDQSAMVKSDSRGPPRSEQSSSMISGQQICADVRVIPRQDQSVLPNMDSSSASQ
TDAKASSHVDMCGSASALRLEQSIIADDRVMARLEQLVNNIPLDPDDLLCQRQSDQPANT
RRMSMTNEDQCIIRQQLEQSATIRATEDLRGIRQSEQSTNVCEDLRATRQQSEQSTNVRS
QEELRIPRVEQSISTAPHLDLCGVSRGQQNANVPLTDSRAVIFRSDQSAVIPLSDGRTIP
IVEHVSPVVLPDSRSNVSRISQTTASNQSIAASVSGQSVTQPGSSVVLTEDINHSEEPLP
PGWEMRYDLYGRRYYVDHNTRSTSWERPQPLPPGWEVRRDPRGRIYYVDHNTRSTTWQRP
NTERLQHFQHWQGERQYVVQQGNQRFLYPQAHGGQASVGPSTSMVDDDDALGPLPAGWEK
RKQPEGRVYYVNHKNRTTQWEDPRTQGQETGIDEPPLPDGWEIRLTEDGVRYFVDHNTRT
TTFQDPRPGAPKGPKGIYRVPRAYERSFRWKLSQFRFLCQTNALPNHIKISVSRQTLFED
SYHQIMNAEAFALRRRLYIIFKGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKSNY
SLQINPASYVNPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLVMKDIESI
DPEFYKSLVWIKENNIDECGLELYYSVDFEILGQVIHHELKEGGDKVRVGEDNKEDYIRL
MTEWRMTRGIEEQTKAFLEGFNSVVPLEWLKYFDERELELMLCGMQEIDVEDWQRNTIYR
HYTRNSKQILWFWQFVTRTDSEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEKFG
KDTWLPRSHTCFNRLDLPPYKSYDQLVEKLNYAIEETEGFGQE
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattgcgaggaagatgctgcatctcctggttttcaccaattgagcattacaatt
gaagcagcaatattgagaagttcaacctttttaaagcctaatccatacatagaattttca
gtcgatgataaaagtcctcgcaaaacagaagtatcaaagtctacatatcaaccaaaatgg
aatgaagaatttactatacttgttacaccatattctcagttacacttccgattacttgac
cacagtacatttcgcaaagatacattgataggagaaaagcgaatagacctgttccaagtg
ttatcgcattataatggaaaactagaaaatttagaattaacatttgacttaatgagtgag
agcaaacatgattctcaactgtccaaagttggcgaattgataacggtatttgatggactt
agaattgatactactaatgagatgctagtaaatgttattgaaccatcttgccaaattcaa
tctgatggtgccacaaatgatacaatcaataaccgaagcattctcaatggtggagttcgt
gcacgcatgagattacatagctcagataatcttgcatcatctatatatcgtggtttgaca
aatattcatcttagtcccaattatagtgatggaaacagccaagcaaacagcaacaaaaac
gttggactttctactacaatctcgaatacagatggtacagtgggtggcaatgtcggtagt
agcgctaatagtagcaacgtttctacaaggattgtagtgaacgggcacacgattctaatg
acagataaatctatggtgtcaccaggaaatcggtatgccacagatgtacgaactttcgca
ggtagatcggccattaaagagctgtcgtcagctaattcatcagagggacgaacatatata
tggagcaataacagcaattcagatcaatctgcaatggtcaagtcagattcacgtggcccg
ccacgatcagaacaatcttcctcgatgatatctgggcaacagatttgcgcggatgtccgt
gtgattccgcgacaagatcaatctgtgcttcctaatatggacagttccagtgcttctcag
acagatgcaaaagcatcgtcgcatgtggatatgtgtggtagtgctagtgccttacggtta
gagcaatcgattattgcagacgaccgtgtaatggcacgtttggaacagttggtgaataat
attcctttggatccggacgatctgttgtgtcagagacaatctgatcagccggcaaacact
cggcgaatgagtatgacaaatgaggatcaatgcataataagacaacaattagaacaatcc
gcaacaattcgtgcgactgaagatttacgtggaataagacaatccgagcaatccacgaac
gtttgtgaagatttacgtgcgacaagacagcagtcggaacaatccacgaacgttcgttcg
caagaggaattacgaattccacgtgtagaacaatcgataagtacagcaccgcatttagat
ctatgtggagtttcgcgtggtcagcaaaatgcaaatgttccactgacagatagtcgtgct
gtaatttttcgatcagatcaatcggcagtgatccctctctctgatggacgaacaattcct
attgtggaacatgtatctcctgttgtgctaccagattctcgttccaatgtatcacgaata
tcacagaccacagcttcaaatcaatctattgctgcatctgtgtctggacaatctgtgaca
caaccaggatcttccgtagtgctcactgaagatatcaatcattcggaagaacccttgcca
cctggttgggaaatgagatatgatttatatgggagaagatattacgtcgatcacaatacc
cgaagcacgtcttgggagagaccacagcctttacctcctggatgggaagttcgtcgagat
ccaagaggtagaatttattacgtggatcataatacaagaagtaccacatggcaaaggcca
aatacagaaagattacaacatttccaacattggcaaggtgaaagacaatatgttgttcaa
caaggcaatcaaaggtttctttatccgcaggctcatggtggtcaagcttctgttggtcca
tcaacatccatggtagatgatgatgatgctctgggaccattaccggcaggttgggaaaaa
cggaaacaaccagaaggaagagtttattatgtaaatcataagaaccgtactacgcaatgg
gaagatcctcgaactcaaggtcaagagactggaatagatgagccaccattgccggatggt
tgggaaatacgattgacagaagatggagttcgatattttgtggatcataacactcgaacg
acgacatttcaggatccaagaccaggtgcacctaaaggcccaaaaggtatatatcgcgtc
ccgagagcatatgaaaggtcattccggtggaaattgtctcaattccgatttttgtgccag
actaatgcgctgcctaatcatattaagatcagcgttagtcggcaaacattatttgaagat
tcttatcatcaaataatgaacgcggaagcctttgcactaagacgacgattatatataata
tttaaaggagaggagggactagattatggaggcgtatctagggagtggtttttcttatta
agtcacgaagttttaaatccgatgtattgcctatttgaatatgccaataaaagtaattac
agtttacaaataaatccagcatcatatgttaatccggatcatttacagtattttaagttt
ataggaagatttattgcaatggctctttatcatggccgatttatatatagtggatttaca
atgccgttttataaacgcatgttaaataaaaaattagtaatgaaggatatagaatctatc
gatccagaattctacaaatctctcgtatggataaaagaaaataatatcgatgaatgcggc
ctagaattatattatagcgtggattttgagattcttggtcaagtgatacatcacgagtta
aaggaaggtggtgataaagttagagtaggtgaagacaataaggaagactacattagattg
atgacagaatggaggatgacaaggggtatagaggaacagactaaagcatttttagaaggt
ttcaattcggttgtaccacttgagtggctcaaatatttcgatgaacgtgagttggagctt
atgctttgcggtatgcaagaaatagacgttgaagactggcaacgcaatactatttataga
cattatactcgtaacagcaaacagattttgtggttttggcagtttgtaacaagaacagat
agcgaaaagagagctagattgttgcagtttgtaactggtacttgccgtgtacctgttggt
ggatttgctgaattaatgggtagtaatgggccacaaagattttgtatagagaaatttggc
aaagatacttggctaccaagatcacatacctgtttcaacagactagatttaccaccttac
aaaagttacgaccaattagtagaaaaactgaattacgcaatcgaagaaacagaaggcttt
ggccaagaataa
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integrated database retrieval system
