Cyphomyrmex costatus: 108774290
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Entry
108774290 CDS
T11118
Name
(RefSeq) probable tRNA pseudouridine synthase 2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ccoa03029
]
108774290
Mitochondrial biogenesis [BR:
ccoa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108774290
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-GeneID:
108774290
NCBI-ProteinID:
XP_018395861
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MCTEFAINLFIQIYTLHTFTFYCRIFDKMINTLASKPKKLVFDARIAWKALNGIFAVYKP
PIVTYLDARNSIIHRLCQDLNSMHVRRPIKHVCIEGDTTRTMKVFTHPSYADHPLVVGPR
YQPKDFVLICANYLSTDMSGLMICGINGGTKWAHKMKESKSPTSYRIKGLLGQATDTYFI
TGKIVEKSTYKYIKRNAIDKICASMQAAHQRKMFELCGLDMQSQAAYELAVQGPIRPVDT
NIPMIYNIKCTDFVSPEFTLEIVCVNENDMYLKTLVHDLGMQLHSVATCTQIQCFRYALF
DLNLALLKKHWDLENFCDNIVQCNTIINENKYLLKQDSPILIERNK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaccgaattcgccattaatttatttatacaaatttataccttacacacttttacc
ttttactgtcgtattttcgataagatgataaatactctagcttcgaaaccgaaaaaactg
gtttttgacgctagaatagcatggaaagcattaaatggaatatttgccgtttacaaacca
ccaatagtcacgtatttagacgcacggaatagcataattcatcgtctttgccaagattta
aacagtatgcatgtgcgtcgaccaatcaaacatgtatgtatagaaggtgatacaactagg
acgatgaaagtatttacacatccgagctacgcggatcatccattagtagtaggtccacgg
tatcaacctaaagactttgtattgatatgcgctaattatctgagcacagacatgtcaggt
ctcatgatctgtggtattaatggtggcaccaaatgggctcacaaaatgaaagaatctaaa
tctccaactagttacagaattaaaggcctcttaggtcaggcaacagacacatattttata
actggaaaaatcgttgagaagtctacatataaatatattaaacgcaatgcaattgataaa
atatgtgcctccatgcaagctgctcatcagagaaagatgtttgaattgtgtgggttggat
atgcagagtcaagctgcatatgagttggctgtgcaaggtccaataagacctgttgacaca
aacattccaatgatatacaacataaaatgtacagacttcgtatctcctgaatttacatta
gaaattgtttgtgtaaatgagaatgatatgtatttgaagactttggttcatgacttagga
atgcagctccatagtgtcgctacgtgcactcaaatacagtgttttcggtatgcattattt
gatctaaatcttgctcttttgaaaaaacattgggacttggaaaacttttgtgataatatt
gtacagtgtaacactataattaatgaaaataagtatttgttaaaacaagatagtccgata
ttgatagaacgaaataaataa
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