Cyphomyrmex costatus: 108774298
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Entry
108774298 CDS
T11118
Name
(RefSeq) autophagy-related protein 13 homolog isoform X1
KO
K08331
autophagy-related protein 13
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04136
Autophagy - other
ccoa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108774298
04136 Autophagy - other
108774298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108774298
03029 Mitochondrial biogenesis [BR:
ccoa03029
]
108774298
Membrane trafficking [BR:
ccoa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108774298
Atg1 complex
108774298
Mitochondrial biogenesis [BR:
ccoa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108774298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
NPV_P10
Motif
Other DBs
NCBI-GeneID:
108774298
NCBI-ProteinID:
XP_018395868
UniProt:
A0A195CP19
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MSAQLSMQDKKDLEKFTKYLALRAAQVIVQSRSGQKVNTTCKPDSSAGDWFNLAIKELPE
VSADAKRALCGEIVSSAVPLCIEISLKTVEGDKMVLETWSLSVLPEQSDPAIRVTYTVYN
RMGILLKSLLSVSRVTPAYKLSRRQGPDSYTMCYRIYMGEPQLHNLGDNYKHVRVGQLCT
PVGTIHLSVSYRTKMTISPTHKGRDSIMLKSDHFHSDLSPRHARYQQSEETSKSLSDTIK
VGAFVINKPVIVNEEDLVIPDVPFSSLLTPKQTSPPPISLVEPNTKTTMAATTDSNNGNN
ERLNNDNTTSKCASQNGSRRSSCSMTSANDDFIMVDLKTPFAVTNTNSDVGAFYRECQSA
PQLQAFMEERTLAEQLGDLTKQLETFETNMQHYEDILSSLYHTENNN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacagttaagcatgcaagacaagaaggatttggagaagtttaccaagtatctt
gcgttgagggctgcccaagttatagtacagtcaagatcgggccagaaagtcaacaccacg
tgcaagccagactcatcagctggcgactggtttaatctggcaataaaggaattaccagaa
gtgtcagctgatgctaaaagggcattatgcggagagatagtaagctcagctgtacctcta
tgcatagaaatttctctaaaaacagtagagggcgacaagatggtattagaaacttggagc
ctcagcgttttgccagagcaaagtgatccggctatacgagtaacatatactgtttataac
agaatggggattttattaaagtccttgctttctgtatcaagagttacgcctgcttacaaa
ttgagcagacgtcaaggacctgactcgtataccatgtgctatcgaatatacatgggagag
cctcaactacataatttaggtgataactataaacatgtaagagtaggtcaattgtgtact
ccagtaggcactatacatttgtcagtctcttacagaacaaaaatgactatatcgcccact
cacaagggacgagattctattatgcttaagagcgatcattttcattcggacttaagtcca
cgtcatgcacgatatcaacaaagcgaagaaacgtcaaagtcacttagtgacaccattaaa
gttggcgcatttgtaataaacaagcctgtcattgttaatgaggaagatcttgtgatacca
gatgtaccatttagttcgctattaacacccaaacaaacgtcgcctcctccaatatcacta
gtagaacctaatacaaagactacaatggcagctacaactgatagcaacaatggaaataac
gagagacttaataatgataatacaacttcaaaatgcgcatcccaaaacggatctagaagg
agtagttgttcaatgactagcgccaacgatgattttattatggtagatttgaaaactccc
ttcgctgtcacgaatactaatagcgatgtaggagcgttttatcgggaatgtcaaagcgct
ccgcaattgcaagcctttatggaagaaaggacgcttgcagaacaattgggagatctcact
aaacaattggaaacgtttgagacaaatatgcaacattatgaagacattttatcatcttta
tatcacacagaaaataataattaa
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