KEGG   Cyphomyrmex costatus: 108774347
Entry
108774347         CDS       T11118                                 
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108774347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccoa03400]
    108774347
DNA repair and recombination proteins [BR:ccoa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     108774347
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT BRCT_2 LIG3_BRCT
Other DBs
NCBI-GeneID: 108774347
NCBI-ProteinID: XP_018395939
UniProt: A0A151IIC6
LinkDB
Position
Unknown
AA seq 488 aa
MIVKFEKIISCSSEHPKYPAANLLQRNSENWKATWRCSKPGEMLAHIIFQLVEPSYITGV
DIGNYQSCVVIVTGSTSSEPDNWIVIINYQFMTNDEAANDKFKDQVQLFTKRELNPDTLK
IKFDRIKVTCMQSANLKVLFGLSYIILRSDPTIDLGLDAFGKFKLKQPHMVKTPMEMMKE
KILNKTEDTKINYKTELREQIKKDSMENFAKCQQEQKLIKRPLLEKLEAGEADQIFGKND
KAQPQCSKDKDKTVNKSPKITKNESNEKVVRTPFGDVVPPRNVDANKNNIKNGTQDSSSS
KKRSLIKLEDLSDSKFNERKKQKCSECCVDSQDRLCTNCQRLPKPKEPTKNVPSQASNHV
SVKKTFKELFNDITFSLSGYVNPQRDDIRRKALSMGAKYIPDPNTTNKKCTHLICAFKNT
PKYQQFRNHTKIVSHTFIEECFDKKIRFPWRRYALDQKEKLQPESEEEIDGSQSESVYDI
DTDTNSDY
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgattgtaaaatttgaaaagataataagctgttcctccgaacacccaaagtatccagct
gccaatcttcttcaacgtaattcagaaaattggaaagccacatggcgatgtagtaaacca
ggagaaatgctggcacacatcatttttcaacttgttgaaccttcttacattacgggagtc
gatattggcaattatcagagttgtgtggtgattgtcactggatctacctcatcagaacct
gacaactggatagttatcatcaattaccagtttatgacaaacgatgaagctgcaaatgac
aaatttaaggatcaagttcaattatttaccaaaagagaattaaatcctgacactttgaag
attaaatttgaccgaatcaaagttacttgcatgcaatctgctaatttaaaagtattgttt
ggattgtcgtacattattttgcgatcagatccgacgatcgatttaggtttagatgccttt
ggcaagtttaaattgaaacaaccacatatggtcaagacacctatggaaatgatgaaagaa
aaaatccttaacaaaacagaagacacaaagataaattataagacagaattacgtgagcaa
ataaagaaagattcaatggaaaattttgcgaagtgtcaacaagaacagaaacttatcaaa
aggccgttactagaaaagctagaagctggagaagccgatcaaatttttggaaaaaatgat
aaggctcaaccacaatgttcaaaagataaagataagaccgttaataaaagtcctaaaatt
actaaaaatgaatcaaatgaaaaagtggttagaactcctttcggagacgttgtacctccg
cgaaatgttgatgctaataaaaataatataaaaaatggtactcaagattcttcgagttct
aagaaacgttctttgattaaattggaggatttgtcagattcaaaatttaatgaaagaaag
aaacaaaagtgttctgaatgttgtgtagattcgcaagatcgattatgtacaaattgtcaa
agattgccaaagcccaaagagcctactaaaaatgttccttcacaggcaagcaaccacgtt
tcagtcaaaaaaacatttaaagaattattcaatgacattacattctctctcagtggatat
gttaacccacaaagagacgatatcagaagaaaagctcttagtatgggagccaaatatatt
cctgatccaaatacaactaataaaaaatgcactcatttgatatgtgcttttaaaaataca
ccaaaataccaacaatttagaaatcatacgaaaattgtttctcatacttttattgaggaa
tgttttgataaaaaaataagatttccttggaggcgatatgctttagatcaaaaagaaaaa
ttgcaacctgaaagcgaagaggaaattgatggcagtcaatcagaatctgtatatgacata
gacactgatactaattcagattattaa

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