Cyphomyrmex costatus: 108774399
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Entry
108774399 CDS
T11118
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108774399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccoa03009
]
108774399
Ribosome biogenesis [BR:
ccoa03009
]
Eukaryotic type
Pre-60S particles
GTPases
108774399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
GTP_EFTU_D2
EFG_III
EF-G_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
108774399
NCBI-ProteinID:
XP_018395996
UniProt:
A0A151II41
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MRFISIEKLSETQNDAARIRNICILAHVDHGKTTLADSLVASNGIISNKLAGKLRYLDSR
PDEQMRGITMKSSSITLYHVHNGTDHVINLIDSPGHVDFSSEVSTAVRLSDGAVILVDVV
EGVCPQTRSALSIAYVEGLKPILVLNKVDRLITEMQLTPLDAYVRLTQVLEQVNAIMGEL
FASDVMEREEREEMVASTWDKVNERDLADWQSVLEEIDDSNLYFSPDQGNVLFTSAIDGW
GFGIKEFARIYSNKLGFSEKVLRKTLWGDFYINNKTKRIMKGAQEKAKKPLFVQLILDNV
WVLYETIVIRKDKDKLPTIAEKLNIKLTTRDLRHTDPKAQLQAVCSQWLPLAQNCLDMVC
EKVPAPHNLTDEKIERLISGNNDFSALPLETQQLKRAFLSCNPSFEAPTIVFVSKMFPVE
KDMLPENRPKSLTSEELAQRREIVRQKHAERLERKICITIENHQDNEEDTIVPNNINHEN
VVEDKLTDGALVAFARVYSGTIKTGDEVFVLGPKHNPTIALEREKTGEKVDPSHVLKDLR
PGRHITKVTVNKLYILMGRELEAVNNVPAGNVFGIGGLEEHVLKTATLSTTIACPSFTEL
TSLAVPILRVALEPKHPNDLPKLINGLKLLNQADACAIVHIQETGEIVLSTAGEVHLERC
LEDLKLRYAKIDINVSDPIVPFRETIVPPPKLDMVNEAIEKKVAEVNLEVWTSNRQCRLE
IDTRPLPENITKLLEKNANLIKLLDSYCDRYTEENGEHKDAGENQLNERSMSDKKQKEAK
VFKNELEAAFLETGWKDNVLDKIWSFGPRKCGPNILLNETDYKQKKFWEQQNTNVDSRAA
YDNSIVNGFQLATLAGPLCEEPMMGVCFVVKKWEIFETPQSDSGGQSQGHLGGQLMSACK
EACRRIFSLRHPRLMTAMYSCSVLVNSDVLGRLYAVFGKRQGRIVSTESAYGFGGQFRVL
ATLPVLESFHLARELRTQTSGLASPQLVFSHWEVIEQDPYWVPSTEEEYLHFGEKADSDN
RAKCYMDAVRRRKGLPVDSQLVTHAEKQRTLSKNK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttatcagcattgagaagctcagcgagacacagaatgacgccgcacgtatcagg
aacatatgtatcctggcacacgtggatcatggaaagactactctggctgattctctcgtt
gcgagcaacggcatcatatccaacaagctggctgggaaacttaggtacctggatagtaga
ccggacgaacagatgcgtgggatcacgatgaaatctagctccataacgctgtatcatgta
cacaacgggacggaccatgtgataaatttgatcgattcaccaggacacgtggacttctcc
tctgaagtttcaacagcagtcagactgtcggatggagctgtcattctagttgacgtggtg
gaaggtgtgtgtccccagacgcgtagcgccttgtctatagcctacgtcgagggtttgaaa
cctattttagtacttaataaggttgaccgattgatcacggagatgcagttgacgccatta
gatgcttacgtacgtttgacacaagtcttggaacaagtgaatgccatcatgggggagttg
ttcgcgagcgacgtgatggaacgtgaagaacgcgaggagatggtcgcgtctacgtgggac
aaggtgaacgaaagggatctggccgattggcaatccgtattggaggagatagatgactca
aatttatacttctctccggaccaaggcaacgttctttttaccagtgcaatcgatggctgg
ggattcggtatcaaggaattcgctagaatttattcgaacaaattaggatttagcgaaaag
gtcttgcgcaaaacgctgtggggggatttttatataaataacaaaacgaagaggatcatg
aagggggcccaggagaaggctaagaagccacttttcgttcagctgatcttggataacgtc
tgggtgctgtacgagacgatagtgatacgaaaagataaagataaattgccaactatagcc
gaaaagttaaatattaagttgacaacgcgcgacttgaggcatacagatccgaaggcacag
ctgcaagccgtttgctcgcagtggcttcctctggcgcaaaattgtctcgatatggtatgc
gagaaggttccagcaccgcataatttaactgacgagaaaatcgaacgattgataagtgga
aacaacgacttctccgctctgcctcttgaaacgcagcaactgaagagagcattcttatcg
tgcaatccatcgttcgaggcaccgactatcgtattcgtatcgaaaatgtttccagtggag
aaggatatgctgcccgaaaacagaccgaagtcactaacatcggaagaattggcacagaga
agagaaattgttcgacagaagcatgcagagcgactggagcgaaagatatgtattaccatt
gaaaatcatcaagataacgaggaagatacgatagtccccaataacataaatcacgagaat
gtcgtcgaggataaattaacggacggtgcattagtagccttcgccagagtatattcggga
actataaagactggagatgaggtattcgttttaggaccgaaacataatcccactattgct
ttggaacgcgagaaaacgggcgagaaggtggatccgtcccacgtgctgaaggatttaagg
cctggcagacatattacgaaggtgactgtaaataaattgtacattcttatgggaagagag
ctcgaggccgtaaataacgtgccggcgggtaatgttttcggaattggtggcctagaggag
cacgttttgaagaccgcgactctttcgacgacaatcgcctgcccttctttcacagagcta
acttctctcgcagttcctatattgagagtagccctggagccgaaacatcccaacgacttg
ccaaagctcatcaacggtctgaaattgttgaaccaagcggatgcctgcgccatcgttcac
atacaagagactggtgagatcgtcctgagcaccgcaggtgaagttcatctggagagatgc
ctggaggatctcaagttgagatacgccaagatcgatattaacgtgtccgatccaatcgtg
ccatttcgcgaaaccatagtgccacctccgaaactcgacatggtgaacgaggcgatcgag
aagaaggtggcggaagtcaaccttgaagtgtggacgtcaaaccggcagtgtcgtcttgaa
atagacacgagacctcttccggaaaacataacaaaattactagagaaaaatgcaaatctg
ataaaattattggacagttactgcgacagatatacagaggagaatggggaacacaaggat
gccggcgagaatcaactaaacgagagatccatgtctgataagaagcagaaggaagcaaag
gtattcaagaacgaattggaagcagcttttctcgaaacgggatggaaggataatgtactg
gataaaatatggtcgtttggtccacgaaaatgtgggcccaatatcttgttaaacgaaact
gattacaaacagaagaaattttgggagcagcaaaacacgaatgtcgattcccgagcagca
tacgataacagtatagttaatggatttcaacttgctactctggctggtcctttatgcgag
gagcctatgatgggcgtttgcttcgtggtgaagaagtgggaaatttttgagactccacaa
agcgattccggtggccagagccaagggcacttgggcggtcaattaatgtcggcgtgtaaa
gaggcttgtcgacggattttcagcctgcgacaccctcgattaatgacggcgatgtatagc
tgtagcgttttagtcaactccgacgttctcgggagattgtatgctgtgttcggtaaaaga
caaggccgtatcgtatctacggaaagtgcttacggcttcggtggacaattcagagtattg
gccactctaccggttctagagagcttccatctcgcaagagaactacggacgcaaacgtcc
ggattggctagtccgcaactagtttttagtcattgggaggtaatagaacaggatccttat
tgggtgccatccacggaggaagaatatctccattttggtgaaaaggcagacagcgataac
cgagctaaatgctacatggatgcagttcgtcgaagaaaaggccttcctgtggattcccaa
ttagttacgcatgctgaaaaacaacgcactctttctaaaaacaagtga
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integrated database retrieval system
