Cyphomyrmex costatus: 108774416
Help
Entry
108774416 CDS
T11118
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108774416
Membrane trafficking [BR:
ccoa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108774416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
108774416
NCBI-ProteinID:
XP_018396015
UniProt:
A0A195CNY9
LinkDB
All DBs
Position
Unknown
AA seq
1529 aa
AA seq
DB search
MSSINSIDSHGTLQWDMMELARHLRQERLFVNSEQQNLQTLNERVLYISSQLAQQAWITA
QQRVSLNRLIVARPDCTPASCCLRANALENSHFIDAYKYLRYQACLSYGEFLGALRKSPK
LLASCLVEGDRAIPESMQTIVQCLAAGLYGSCILPEDKSLVLQLLRHLMLLQIIPSDNPR
RLLRHGTCAFSRFYSIFHESLFSAKLFLTAALHNPIVQLLMEDEMFLDIDPDKAPIRFPP
AERLKKFGKEGTTEYQAKLQRYRLWTVNSLYRITQRFIVNIRETIHCFPTSVCWLVRQMA
GLFSKNGNVDPKEVHAMCTDLVFTYFICPAIVNPEPYGITDAPISYVARFNLMQVGQILQ
MLSLQKYQSIDNKVIDLYKKFEKDSVSSIIDSMLDGATEELEEEPIIIDNNKFQGLSRSA
ALFTESELNSLITFLNTIAGDNNEETILHNSFDRKQLAEMLLQLPSGLLHNNKLSNEYLE
TPSKRGVATGKGKGRGIRMTTFSPNITNESGEEINGTAVPEEETVDKNFHDVLVIPFGPT
IGESVGLLSEQKVLCMELQSGMKNGPVTLNLPDDASNELSRQENSNVERIETQEKRTRFS
LSHDEVLFEGSIGNTSDNLEAVSEAASNHSVASSLELETEDQNDNLSDMVSANVSGRGTP
NISGRDTPSSQITEGDDGRAAGEVRQLDLPPPNIPTKQSRSEIDDKFCKFEIKKLIEGDE
TVSMVSDTWSTDVLASDSEIVEQQDRILLAVPPEQVAPVLPAEPTPTMLDISETASEAWS
TDVLASDSERLTEVDTDDTASVARSDDTARSEIEIESRADSEGNEETLQSATPCPDGSSI
SFSTIAGIREDSGIVTSIVHPSPTTSPLPSSSNVTGRGGTKSDYRRSTMEYVDKNANNIS
NMDYTKPLRDDRLVHLIDKLQIDNGKQVERQASAHNHITAAAVAPALLLANHISAPVLSE
KPQNGDTKTEELDSCITSVGDTVGRLSTASLTSSSSSGSEPRMKSNISASDLPTPTINGT
CDAVDGSIPNFSKPNASTGAIPKSISFDMTAERGDKELLDDDQKNKRGFFGKLKMTLRNR
RGKAIRGADDRCFDREAGGDGVDMCRHRLRRIMSEDVTSSGNVAGDTTDDILAKYRRKPS
AASDTASIESNQSRTKEVEDERLSIDPNNVELSYAFADAKRKLRMVLSTADLQHIPWNMS
ERHCWSQKENELVAFLQLQLAEAINLQDRALIAHLHETLRCVRLFNDDGCRKLFKSLRED
YQKRSPYIAYLIRCRQGLLSTLAHLDRLCVRVKCDRDAINNHLVSVCVRVFLEKRETFLL
RFCDEFKKLTLADEKQDLVDNFLGKVHAEMDNDPIWQSASANQLDLARVVVERTVMARVY
HNALYPNGDGDVYRDQLLHDHIKKLAKVVTPNHKDLRIPKVYHYECPWPWAQAELAVISA
YKTPRDKLQCVFRCATTIMNLLSMASERGIPAADDLIPVLVYVIIKTNPPSLLSTVQYVD
SFYGNRLEGEEQYWWTQFCSAIEFIKTMD
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgattaacagtatcgattcccatggaacattacagtgggatatgatggaatta
gctcgtcatttgcgccaggaaagactgtttgttaattcagaacagcaaaacttacagact
cttaatgaacgagtcttgtatatctcatcgcagttagcacaacaagcatggataactgct
caacaaagagtcagtctgaatcgcttgatagtggcaaggccagattgtactccagcgtcg
tgttgcctaagagcaaatgcattggaaaattcacattttatcgatgcatataagtacctg
cgctatcaagcgtgtttatcttatggagaatttttaggtgcactgcgaaagtcaccaaaa
ctccttgcttcatgcttggtcgaaggggacagagccattccagaatcgatgcaaacaatc
gtacagtgcctagctgctggattatatggaagttgtatattaccagaggataaaagttta
gtccttcagttactgaggcatcttatgttgctgcagataattccgtctgacaacccacga
agattgctcaggcatggaacatgcgcgttttccagattttactcgatttttcacgagagt
ctgttctccgcaaagcttttcttgacagcagctttgcacaaccctatagtgcaattactc
atggaagatgaaatgttcttggacattgatccggataaagcgcctattagatttccgcct
gcagaaagattgaagaaattcgggaaggaaggcacgaccgaatatcaagcaaagttacag
cgttatagactgtggacagttaattctttgtatcgtatcacgcagagatttatcgtcaac
attcgtgaaacaatacattgctttcctacaagtgtttgctggcttgtgagacaaatggca
gggctttttagtaagaatggaaatgtagatccaaaagaagtacatgccatgtgtactgat
cttgtatttacatattttatttgccctgctatagttaatccagagccttatggcattacc
gatgcaccgataagttatgtcgcgaggttcaatctaatgcaagttggacaaattttacaa
atgctttcgctacaaaagtatcaaagtatcgataacaaagttattgatctttataaaaaa
tttgagaaagattcagtgtcttccataatagattctatgttggatggtgcgacagaagaa
ttagaggaggaaccaattataattgacaataataaatttcaaggcctgtcacgatccgca
gcattgtttacggaaagtgaattgaattccttaattacatttttaaacacgattgctggt
gataacaatgaagaaacaatattgcataattcatttgatagaaaacaattagcagaaatg
ttgttgcaattaccctcaggtttactgcataataataaactaagtaatgaatatttggaa
acacctagcaaacggggtgttgctacaggaaaaggaaaaggacgaggtataaggatgact
acattctcaccaaatataacaaacgaaagtggagaagaaattaatggcactgcagttcct
gaagaggaaactgtagataaaaattttcacgatgtgttagtcataccttttggtccaaca
attggagaatctgtagggctactcagtgaacagaaagttctatgcatggagctccaaagt
ggtatgaagaatggacctgttactttgaatctccctgatgatgcctctaatgaactttct
agacaagaaaatagcaatgttgaacgtatcgaaacgcaagagaagagaactcgattctca
ttgtcacatgatgaagttctgttcgaaggatcgattggaaatacatccgataatttggaa
gctgtatcagaagccgcttccaatcatagtgtcgcttcttccctagaattagaaacagaa
gatcaaaatgataatctctcagacatggtgtctgctaatgtatcgggtagaggaactcct
aatatatcaggtcgagatacaccatcgtcccagattactgaaggagatgatggacgcgct
gcaggtgaagtacggcagttggatttgccgccgcctaatatcccaaccaaacaaagtcga
tccgaaattgatgacaaattttgcaaatttgagattaaaaagcttattgaaggagatgag
actgtttctatggtatccgatacttggtctacagatgtattggcctcagatagcgaaata
gttgaacaacaggatcgaatactacttgctgttcctcctgagcaggttgcacctgttctg
cctgctgaacctacgccaaccatgttagacattagtgaaactgctagtgaagcttggagc
acagatgtattagctagcgattcagaaagattaactgaagtagatactgatgacactgct
agcgttgctagatctgatgatacagccagatccgaaatcgaaatagaaagccgtgctgat
tctgaggggaatgaagaaacgcttcaatctgcaaccccatgtccggatggttcaagcatc
agtttttcgacaattgcagggattcgagaggattctggcatagtaacttcaatagtccat
ccatctccaacaacatctccattaccatcgtcatcgaatgtaacaggtcgtggtggaacc
aaatccgattaccgacgtagtacaatggaatacgtagacaaaaatgctaacaatattagc
aatatggattatactaaaccgttacgggacgacaggctggtccatttgatagataaactt
caaattgacaatggtaagcaagttgaacgtcaagcatctgcgcacaatcacatcactgcg
gctgctgtcgcaccagcgttgctattagctaatcatatttctgcgcctgttttgtcagag
aagccccaaaacggtgacacaaaaacagaggaattggatagctgtataacatcagtcgga
gataccgtaggccgattaagcacggctagcttaacatctagcagtagttccggatcggaa
cctcggatgaaaagcaacatttcagcatcggatttaccaacgccaacgattaatggcact
tgtgatgcggtagatggatcgattcctaatttttccaagccaaatgcatcaactggagct
attccaaagagtataagctttgacatgactgctgagcgtggcgataaggaattgttggat
gatgatcaaaagaacaaacgcggtttttttggtaaattaaaaatgacattgagaaatcgt
agaggtaaagcaattcgcggggcggacgatagatgttttgatcgagaagctggtggcgac
ggcgtcgatatgtgtaggcacagattacgcaggattatgtcagaagatgtaacatcatct
ggtaatgtcgcgggcgatactaccgatgatatattagcgaaatatagaagaaaaccaagc
gcagctagcgatacagcttcaattgaaagcaatcaatctcgtacaaaagaggtggaagat
gaaagactttcaatcgatccaaataatgtagaactatcttacgcttttgcggatgctaaa
agaaaattacgcatggtacttagtactgctgaccttcaacacattccatggaatatgtca
gagagacattgttggtcgcagaaagaaaacgaactagttgcgtttttacaactacaactg
gcagaagctataaacctacaggatagggcattaatagctcaccttcatgaaactttacgt
tgtgtgcgtttatttaatgatgatggatgtaggaaactcttcaaatctcttcgagaagat
tatcaaaagcgatccccttatatcgcatatttaattagatgtcgtcaaggattactgtcg
acgttagctcacttagatagattatgcgtacgagttaagtgcgatcgagatgctatcaat
aatcatctcgtatccgtttgtgtaagagtatttttggaaaaaagggaaacatttctcctg
cgtttctgcgacgagttcaaaaagcttacattggccgacgagaaacaggatcttgtggat
aatttcctagggaaggtccatgccgaaatggacaacgatccgatctggcaatcggcgagc
gctaaccaattagatttggcgagagtcgtagtggaaagaaccgtcatggcacgggtatac
cacaatgcactctatccaaatggagatggagatgtatatagggaccagcttcttcacgat
cacattaaaaagttggcgaaggtcgtaactccaaatcacaaggacctacgtattccaaag
gtttatcattatgaatgcccctggccatgggcgcaggctgaattggctgtgatatcggcg
tataagactcctagggataagttgcagtgtgtatttcgttgcgcgactactatcatgaat
cttctttccatggcgtcggaaagaggcatacctgctgccgacgatcttattcccgtgctg
gtttatgtcataattaagactaatccgccgtctttattatcgactgttcaatacgtagac
agtttttacgggaatcgattggagggcgaggaacaatattggtggacgcagttctgctcc
gcgatcgagtttattaagacaatggattaa
DBGET
integrated database retrieval system
