Cyphomyrmex costatus: 108775185
Help
Entry
108775185 CDS
T11118
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccoa03009
]
108775185
Enzymes [BR:
ccoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108775185
Ribosome biogenesis [BR:
ccoa03009
]
Eukaryotic type
90S particles
Helicases
108775185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
Helicase_C
AAA_22
AAA_19
nSTAND3
ResIII
Flavi_DEAD
ATPase
HA2_N
Helicase_RecD
ABC_tran
AAA_30
AAA_23
AAA_16
AbLIM_anchor
Motif
Other DBs
NCBI-GeneID:
108775185
NCBI-ProteinID:
XP_018396974
UniProt:
A0A195CKR7
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MGKKGYNWKSRAAANVDVDNSTTKEIVLDIQHRAEDYDSCNALVLPAQKRKTKNIDKKVA
TTRLLSKKRRKQLEKIIERKKKKLQRAALLEDLTKVQATPAELKQYVSLTSMQNKGLKRH
FRELETPVEKLKRKVDDEEESDSTKIIINSIKMSKKKRLAILNNIKQDEIKLDPNVVGFE
SSDSSNEDDSDNEEDNEEHVANNIASDVVPNKGNKIIEKEEEKNLSKEVDKETTSIKSQE
SKQSVEVQQQDVTKIHTPAVFIPVNRKPEIQAVRLKLPVVAEEQVIVETINENPIVIITG
ETGSGKTTQVPQFLYEAGYAQNKLIGITEPRRVAAMSMSKRVAEELNLSEKLISYLIRFE
GNVTEETKIKFMTDGVLMKEVQSDFLLTKYSVIILDEAHERSVYSDILIGLLSRIVPLRN
KRGNPLKLIIMSATLSVKEFVENTRLFKIKPPIIEVKARQFPVKIHFNRTTSKDYVNEAL
QKTIKIHTRLPEGGILIFLTGQQEVHTVVRKLRKLFPLKKNKQSQVKMVEDPEKNKVPEA
SDKEHSEKDDSDDDFDAEEALRRNKQRQKKQIILPTINLDDYSINPTDDTHEDLINVQDD
EDNLDEDEDEDEDVIDFRGLTNAQPLWVLPLYSLLPGHKQAKVFEPPPEGYRLCVVSTNV
AETSLTIPNIRYVVDSGRCKTRLYDKVTGVSTYHIGYTSKAAAAQRAGRAGRTRPGHCYR
LYSSAVYNNDFEEYSQSEIQRKPVDDLLLQMKAMNIDKVVNFPFPTPPDIMQLKSAENRL
TILEALQPPSKKKEEIYCTKVTPLGRSIAAFPVSPRYGKMLALSHQHNLSKYTICMVAAL
SVQEVLIETLDMEGPTKSKWLQKRRYWAGTGNSLLLGDLMVLLRAIGTAEYAGSKGRLLF
FCEENGLRHKAVIEIRKLRQQLTNEINLNIPNLNLIIDPKMPLPTDMQAKLLRQIVLAGM
ADQVAKKVLPDEIKEDQDKAKWKHAYRTPEMEEPVFMHSSCALRKTSPEWVVYQEVYETN
KMYMRGVTAIEPEWLPKFVPMLCRISEPLVDPPPRYNPETGKIICRVSGTFGKAGWVLPL
MDIEHPLTVDGVKWFAYFFLEGQVFSKLKRFVPSLLTTPGSITKSWAKLIPRTQVIVQTL
QSQGIMSKDKLIEIWVSDKKFLLSAYQKWLPESAYAEVAQLWPPL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaaggttataattggaaatcaagagctgctgcaaacgtggatgttgataat
tccactactaaagagattgtattagacatccaacatcgcgctgaagattatgacagttgc
aatgcacttgtcttacccgctcaaaagagaaaaacgaaaaacatagataagaaagtagca
actactcgattgttatcaaaaaaacgcagaaaacaattagaaaaaataatagagcggaag
aaaaaaaaattacagagagcagcattgttagaagatctgacaaaagtacaagcgactcct
gctgaactgaaacagtatgtcagtctgacatccatgcaaaacaagggcttaaagcgtcat
tttcgagagcttgagacacctgttgaaaagttaaaacgtaaagtagacgatgaagaagaa
agtgattcgacaaagataattataaattctatcaaaatgagcaagaagaaaagattagct
attctaaataatataaaacaagacgaaattaaacttgatccaaatgtagttggatttgaa
tctagtgatagtagcaatgaagatgatagtgataatgaagaagacaatgaagaacatgtt
gctaataatattgcttctgatgttgtgccaaataaagggaataaaataattgaaaaagaa
gaagagaagaatctttccaaagaagtagacaaagaaacaacttcaattaaatcacaggaa
tctaaacaatcagtggaagtacaacagcaagatgttaccaaaattcatacacctgctgtt
tttatacctgtaaatagaaaacctgagatacaagcagttagattgaaactacctgttgtt
gcagaagaacaagttatagttgaaacaataaatgagaatccaatagttataattacagga
gaaacaggaagtgggaagacaacgcaagtacctcaatttttatatgaagctggatatgct
caaaataaattgattggaataactgaaccaagaagagtggcagcaatgtcaatgagtaaa
cgtgtagctgaagaattaaatctttctgaaaagttaatttcatatttgattcgtttcgag
ggaaatgttacggaagaaacaaagattaagttcatgaccgatggtgttttgatgaaagag
gttcaaagtgatttcctgttaacaaaatattccgtgattatacttgatgaagcacacgaa
cgcagtgtgtattccgatatcctgattggtttattgtcgagaatcgtaccacttcgtaat
aaacgcggtaatcctttgaagttgataattatgtcggctacattgtctgtgaaagaattt
gtagagaacaccagactgtttaagataaaaccgccgataattgaagtcaaagcacgacaa
ttccctgtaaagatacattttaatagaacaacaagcaaggattatgtcaatgaagcattg
caaaaaacaataaaaatacatactcgtcttccagaaggcggtatattaatatttttaaca
ggtcagcaagaggtgcatacagttgtgcgtaaattacgcaaattgtttccgttaaagaag
aataaacaatctcaagttaaaatggtggaagaccccgaaaaaaataaagtgccagaagca
tcagataaagagcacagtgaaaaagacgattccgacgatgattttgatgctgaggaagct
ttgcgtcgtaataaacagaggcaaaagaagcagattatacttccaactattaatctcgat
gattattcaataaatcctactgatgatacgcacgaagatttaatcaatgtacaggacgac
gaagataacttggacgaagacgaagatgaagatgaagatgtgattgattttaggggacta
acaaacgcacagccattatgggtcttacctctctattctctcttacctggacacaaacaa
gccaaagtgttcgagccaccaccagaaggatatcgcttgtgcgtggtatctactaatgtt
gcagaaacctcgctgacgattcctaatattagatatgttgtagacagtggacgttgtaaa
actagactgtacgacaaagtgacaggcgtaagcacatatcatattggctatacgagcaaa
gcagcggccgctcagcgtgccggtagagccggtagaactcgacctggtcattgctataga
ttatactcatcggccgtatacaacaacgatttcgaagaatacagtcagtcagagattcag
agaaaaccagtagacgatttgctgctgcagatgaaggcaatgaatatagacaaggtcgtg
aattttccatttcccacaccaccagatattatgcaattaaagtctgcagaaaaccgactc
acgatacttgaagcgttacagccaccttcgaagaaaaaagaagagatatactgtacgaag
gtgacgccgcttggacgcagtattgccgcgtttccggtatctccgcgttacggtaaaatg
ctggcactatctcatcaacataatttatcgaaatatacgatatgtatggtagcggctctc
agtgtccaagaagtgttgatagaaacactcgacatggagggtccaactaagagcaaatgg
cttcaaaagcgtcgttactgggctgggactggcaatagtttgcttcttggtgatttaatg
gttttattaagagccatcggaactgccgagtatgcagggtcaaagggaagactgttgttc
ttctgtgaggaaaatggtttaagacacaaggctgtgattgagatcaggaaacttaggcaa
caactcacaaatgagattaatttaaacataccgaatttaaatttaattattgatccaaaa
atgccactgccgaccgatatgcaagcgaaattgctgcgccagatagttcttgcaggtatg
gcggatcaagtcgcaaaaaaggttttgcccgatgagataaaagaagatcaagataaggcc
aagtggaaacacgcctatagaacacccgaaatggaagaacctgtgttcatgcattcctca
tgtgctctacggaaaaccagtccggaatgggtggtttatcaggaagtatacgaaacgaat
aagatgtacatgcgaggtgtcacagcaatagaacctgagtggttaccgaaattcgtgccc
atgttgtgtcgcatcagcgaaccattggttgatccaccgccaagatataatccagaaact
ggtaaaatcatctgtcgtgtgtccggtacattcggaaaagctggatgggtgctaccactg
atggatatagagcatccattgacggtggacggcgtcaaatggtttgcatatttcttcttg
gagggtcaagtgttttctaaactgaaacgatttgtcccgtcattgctgacgacacctggt
agcatcactaaatcatgggccaagctgataccacgcactcaagtaatagtacaaacgcta
cagtcacaaggaatcatgtccaaagacaaactgatagaaatctgggtttcggacaagaaa
tttttgctgtcagcttaccaaaagtggttgccggaatccgcgtatgcagaagtagcacag
ttatggccacccttgtaa
DBGET
integrated database retrieval system
