Cyphomyrmex costatus: 108775252
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Entry
108775252 CDS
T11118
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108775252
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccoa01001
]
108775252
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccoa03021
]
108775252
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108775252
Enzymes [BR:
ccoa01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
108775252
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
108775252
Protein kinases [BR:
ccoa01001
]
Serine/threonine kinases: Other
TAF1 family
108775252
Transcription machinery [BR:
ccoa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108775252
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108775252
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
zf-CCHC_6
Cac1_C
Motif
Other DBs
NCBI-GeneID:
108775252
NCBI-ProteinID:
XP_018397060
LinkDB
All DBs
Position
Unknown
AA seq
1903 aa
AA seq
DB search
MGDSDEENEKDLASGLNITGFLFGNIDDNGQLEDDILDPDAKQHLSSLSRLGLSSFINEM
MSNDNNAEERENDKVEKKKEDQNTTTNDMDVDYLVKSPTALDFSDINELAEDTIDEVSKS
NGLDRKLDKENADYDADDEEVVSKSDTQLMPPPPIPEEKEILTAEEAEAARQRKLETPLA
SMLPSKYANIDVTELFPDFRTNKVLRFSRLFGPGKPSSLPQIWRGVRKRRKKKKHYDVRD
SDSGSDQDDKKSKFKGWIMQYGPEPSAEACCSDDENKLLQPVEDKEQIGKTGESGENGDM
GPKVADWRFGPAQLWYDMLEVPETGDGFNYGFKMVDKVEEQENKPETKDEDFADDAFLMV
SQLHWEDDVVWNGDDIKHKVMQKLNSKNNAAGWVPSSGNRTAQAFSQPGKGASVTVTPNV
RLATSQITTPLHMQSQKNKMNIGKGNQQPQREEDDTWYSIFPVENEELVYGLWEEEVIWD
PEQMKKFLKPKILTLDPNDENIVLGIPDDIDPALLHKDNGPQPKVKIPHPHVKKSKLLLG
KAGVINVLEEDTPPPPPKSPDRDPFNISNDTYYMPKSSETTLRLKVGGGNLIQHSTPVVE
LRTPFVQTHMGPMRLRNFHRPPLRRFSYGPLALPGPHGVLPLLKHIKKKAKQREQERIAS
GGGDVFFMRTPEDLTGRDGELVLVEFSEEHPPLMNQVGMCSKVKNYYKRRAGKDQGPQTY
KYGETAYAHTSPFLGILTPGQSIQAIENNMYRAPLYEHKIPETDFLVIRSRQQYYIREVD
ALFVAGQECPLYEVPGPNSKRANNFVRDFLQVFIYRLFWKSRDTPRRIKMDDIKKAFPSH
SESSIRKRLKLCADFKRTGMDSNWWVIKPDFRLPTEEEIRAMVSPEQCCAYFSMIAAEQR
LKDAGYGEKFLFTPQDDDDEDMQLKMDDEVKVAPWNTTRAYIQAMKGKCLLQLAGPADPT
GCGEGFSYVRVPNKPTISKEEQEAQPKRTVTGTDADLRRLSLNNAKALLRKFGVPEEEIK
KLSRWEVIDVVRTLSTEKAKAGEEGMTKFSRGNRFSIAEHQERYKEECQRIFDLQNRVLS
SNEVLSTDEGESSEEDSSDIEEMGKNIENMLSNKKTSTQLSLEREEQQRHELRKMLMGEA
QEQESKKGKESKKKDEEEDSPVNNFNAQQGRVLKIYRTFRNPEGKEYTRVELVRKPAVID
TYLKIRNSKDETFIKQFATLDEAQKEEMKREKRRIQEQLRRIKRNQERERMLGGPSVVNG
NNINNSSNIFDRSNINTSSTTSSTSILPFCNFQSSNSSIPASKHPKTEISPPKRKKPKLK
PDLKLKCGACGNVGHMRTNKACPLYQNSIAIAPVNVAMTEEQEEEIEKQLNTDDQDLVNV
DGTKVKLSSKLIKHAEEMKRRTLLLKVPKEAVNSKKRRKLHTDDHCDYLKRHQRPVNRRR
TDPVVVMSTMLESILNEMRDLPDVQPFLFPVNAKVVPDYHKIIQRPMDLQTIRENLRLKK
YQNREEFLADVNQIVENSTLYNGAKSSLTVAAKRMLDTCVERLGEKEDRLMRLEKAINPL
LDDNDQVALTFILDNVVNNKLKSMTEVWPFMKPVNKKMVKDYYNIVKRPMDLETISKKVS
AHKYHNRHEFVRDIEQILENCSIYNGKESPLTSKAELLVKVCKDTLDEYGEHLTQLENSI
LLVQKRAMEQADIDSSWLCPDEENYTITEPEFRSSQNSSPENPFSKSNIDDFDFVDVEGD
MEIDMDRNSKKKDVLEEDLQFSSEDEFDEVPFGTDEHSEQNEAETLELSEVRESVVLADD
DSQQAAEAMVQLGNVGFYVGEQQLLQQDESMDVDPNYDPSDFLLAGLPARDDKGENKIQD
DLAVSESDDDAENVTSKQEAQQDQQSQQQLPQPDEDVGGDLWF
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgggggactctgatgaggagaatgagaaggatctggcatctggccttaacattactggg
ttcctctttggcaacattgatgacaatggtcaattggaggatgatatcttggatcctgat
gccaaacaacatttatcttcgctcagtcgccttggtctaagttcattcatcaatgagatg
atgtctaatgataataatgctgaggaaagagagaatgataaagtagagaagaagaaggaa
gatcaaaacacaactacaaatgacatggatgtggattacttagtgaaatcacctactgca
ctagatttctcggatataaatgagttggcagaagatacaattgatgaagtctccaagagt
aatggacttgacaggaaactagacaaggaaaatgcagattatgatgctgatgatgaggag
gttgtcagtaaatcagatacacaattgatgccaccgccaccgataccagaagagaaggag
atattgactgcagaagaagcagaagcagcacgtcaacgtaaattagagacacctctagct
tccatgctgccatcaaagtatgccaatatcgatgttactgaattgtttcccgattttcgc
accaataaagtgctcagattctcgcgactgtttggacctggcaagccaagcagcctacca
cagatatggaggggtgtaagaaaacggcgtaaaaagaaaaagcattatgatgtcagagat
tctgattctggctctgatcaagatgataaaaaatccaaatttaagggctggatcatgcaa
tatggtcctgaaccgagcgctgaagcttgttgctcagatgatgaaaataaactgttgcaa
ccagtagaagacaaggaacaaattggtaaaacgggtgaaagtggagagaacggtgacatg
ggtcctaaagtagctgattggagatttggacctgcgcagttgtggtatgacatgctggaa
gtaccagaaactggagatggattcaattatggtttcaagatggttgataaagtagaagag
caagaaaacaaaccagagaccaaagatgaagatttcgctgatgatgcattcttaatggta
tcacaattgcattgggaagatgatgttgtctggaacggagatgacataaaacataaggta
atgcagaagttgaacagtaagaataacgctgccggttgggtgccctcaagtggcaacaga
acagcgcaagcctttagtcagcccggaaaaggtgcctctgtcaccgtaacacctaacgtt
agactggccacttcgcaaattacaacgccattacacatgcagtctcaaaagaataagatg
aatataggcaagggaaatcagcaaccacagcgggaggaggatgacacctggtattcgata
tttccggtagaaaatgaggaactggtttacggtttatgggaggaggaagttatttgggat
cccgaacaaatgaaaaaattcctgaaaccaaagatacttacgttggatccaaatgacgaa
aatatagttctaggcataccagacgacattgatcccgctcttcttcataaagacaatggt
ccacaacctaaagtaaaaatcccgcacccgcacgttaagaaaagtaagctactgttaggt
aaagcaggtgtcatcaacgttctcgaagaagatacgcctccaccaccgccgaagtcgcct
gaccgggatccgtttaacatatcaaacgatacatattatatgcctaagtcctcggaaact
actttgaggttgaaagtcggcggtggcaatttgatacagcatagcactcctgtagtggag
ttgcgtactccttttgtacaaacgcacatgggtccaatgcgattgagaaactttcataga
ccgccgttacgaaggttcagttatgggccattagctcttccaggaccacatggtgttttg
cctctgctgaagcatatcaaaaagaaagctaagcaacgagagcaagaaaggattgcttcc
ggtggaggcgatgtgttctttatgagaacacctgaagacttaactggacgcgatggcgag
ttggtgcttgttgaattctcagaagaacatccaccacttatgaatcaggtcggcatgtgc
tcgaaggtaaagaactattacaagagaagggctggaaaagatcaaggacctcaaacatac
aaatatggagagacggcgtatgctcacactagtccttttcttggaattcttacgcctggc
caaagcattcaagccattgaaaacaacatgtatagggctcctctttatgagcataaaatt
cccgaaactgatttcttagtcataagatcgagacagcaatattatattagagaagtagat
gccttatttgttgctggacaagaatgcccactttatgaagtccctggaccaaattcgaag
agagcaaacaattttgtacgagattttctacaggtgttcatatacaggttattctggaag
tcacgcgatactcctcgacgaattaagatggatgacataaagaaggctttcccatctcac
agtgagagtagtattagaaaaagattaaagctgtgtgctgactttaaaagaactggtatg
gattccaattggtgggtaataaaaccagactttagattgccgacagaagaggagatccga
gctatggtgtcaccagagcagtgctgtgcttatttcagcatgatcgcagccgaacagcgt
ctgaaggatgctggatatggagagaagtttttgttcactccacaagacgatgatgatgag
gatatgcagttgaaaatggacgatgaggtgaaggtggcaccatggaatacgacgcgcgct
tatatccaagccatgaaaggaaagtgtctactgcaattggcaggtccagctgatccaact
ggctgtggcgaaggtttcagttatgttagagtaccgaataaaccgacaattagcaaggag
gaacaagaagctcaaccaaaaagaactgtaactggcacagacgcggacttgaggagattg
tccttgaacaatgcgaaagcgttgttgcgaaaatttggtgtacccgaggaggagatcaaa
aagctatcgcgttgggaagtaatcgacgtggttcgaactctatcgacagaaaaggcaaag
gctggcgaggagggaatgacaaagttttcacgtggcaatcgtttctccatcgccgaacat
caggaacgttacaaagaggagtgccaacgaatctttgacttacagaatcgcgtgctatct
tcgaacgaagtattgagcacggacgagggtgagagttcggaagaagacagctcggatatc
gaggaaatgggtaagaatatcgaaaatatgttatcaaacaaaaagaccagtacgcagcta
tcactggagcgggaggaacaacagcggcacgagttacgaaagatgctcatgggcgaggcg
caggaacaagaaagcaaaaaaggcaaggagagtaaaaagaaggatgaggaggaggacagt
ccggttaacaatttcaatgcacagcagggacgtgtgttaaagatttaccgcactttccgt
aatcctgagggcaaggaatacacgcgagttgagttagtgaggaaacctgctgtaatcgac
acataccttaagatccgcaactcgaaggatgaaacattcatcaagcagtttgccacattg
gacgaggcacagaaagaagaaatgaagcgagaaaagcgtagaattcaggaacaattgcga
cgaatcaagcgaaaccaagagagagagcgtatgttgggtgggccatctgtagtgaacggc
aacaacatcaataattcgagcaacatatttgatcgcagcaatattaacacttcatctacc
acttcctcaactagtatccttccattctgtaatttccaatcttctaattcttctatccca
gcgtccaaacatcctaaaacggaaatatctcctcctaagcgtaaaaaacctaaactcaaa
ccagatctaaagcttaagtgcggtgcttgtggcaacgttggtcacatgcgtacgaacaaa
gcatgtccgctttatcaaaacagtatcgccattgcaccagtcaacgtcgcgatgaccgaa
gaacaagaagaggaaatcgagaagcagctaaatactgatgatcaagatctggtcaatgtt
gatggcaccaaggtgaagttatcctcaaaacttatcaagcacgccgaggagatgaagagg
cgtacactattacttaaagtgccgaaggaagcggtaaattcaaagaaacgtagaaaacta
cacacagatgatcattgtgattatttgaaacgccatcaaaggccagttaacagacgtaga
actgatccagttgtagtaatgtctacaatgttagagagcattttgaatgaaatgagagat
ctgccagatgtgcaaccgttcctgtttccagtcaatgctaaagtagtccctgattatcac
aagatcatacagcgacccatggatctgcagaccatacgtgaaaatttgaggctaaagaaa
taccaaaacagggaggagtttttggcggatgttaatcagattgtggagaactcgacgctc
tataacggagcaaagagttcattgactgtggccgccaagagaatgttggatacgtgtgtc
gagaggcttggcgaaaaggaggatcgtttgatgagactggagaaggccatcaatcctctt
ctggacgacaatgatcaggttgctctcacttttatcttagataacgttgtcaacaataag
ctgaaatctatgacagaagtatggccgtttatgaaacctgtcaataaaaagatggtgaag
gattattataatattgtcaagagaccgatggatctagaaacaatatctaaaaaagtttct
gcgcacaaatatcataatcgtcacgagtttgttagagatatcgaacagattttagaaaat
tgctcgatttataatggtaaagagtctccgcttacaagtaaagcagagttgctggttaaa
gtgtgtaaagatacattagatgagtacggtgaacatctgacacaattagagaacagtata
ttgctcgtgcaaaaacgagcgatggagcaggcagacattgattcctcatggctttgccca
gatgaagaaaattatactatcacggaacctgaatttagaagtagccagaatagttctccg
gagaatccatttagtaaatcaaatatagatgacttcgattttgtcgatgtagaaggagac
atggaaatagacatggataggaactcgaaaaagaaggatgtgctcgaagaagatcttcaa
ttctctagcgaagacgaatttgatgaggtgccattcggcacggacgaacattccgagcaa
aatgaagcggagacattggagttaagcgaagtcagggaaagtgtcgtattagcggacgat
gacagtcaacaagccgcagaagcaatggttcagttaggcaatgttggtttttatgtgggt
gaacagcagctgcttcaacaagatgagagcatggatgttgatccaaattacgatccatca
gacttcttgttggccggtttaccagccagagatgataaaggagagaataagatccaggac
gatctggctgtttccgaaagcgatgatgacgctgagaatgtcacatccaaacaggaagca
cagcaggatcagcagtcgcagcaacaactgccacaaccggacgaggacgtgggtggtgat
ttgtggttctaa
DBGET
integrated database retrieval system
