KEGG   Cyphomyrmex costatus: 108775255
Entry
108775255         CDS       T11118                                 
Name
(RefSeq) protein similar
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa04137  Mitophagy - animal
ccoa04140  Autophagy - animal
ccoa04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108775255
   04137 Mitophagy - animal
    108775255
   04148 Efferocytosis
    108775255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccoa03000]
    108775255
Transcription factors [BR:ccoa03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    108775255
SSDB
Motif
Pfam: bHLH_HIF1A PAS_3 PAS PAS_11 PAS_9 PAS_4 HLH PAS_2
Other DBs
NCBI-GeneID: 108775255
NCBI-ProteinID: XP_018397064
LinkDB
Position
Unknown
AA seq 1127 aa
MDTHKKEKKHKEKRRSNEKRKERSRDAARCRRSRETDIFTELAAALPVAPEQAALLDKAS
VMRLAIAYLKVRAVVDSIPVTLTKSESSAKMDELFPKALNGFMLVLSGDGNMVYLSENVK
DYLGVSQMDMMGQSVYEYSHPCDHDELRECLSSKSTDNNEKRTCNFFLRFKCTLTSKGRK
VNLKSASYKVIHCTGRLTNIRDSNSNSMEVDNEEQSKEDEDAGQDTDISLVLVGSPIPHP
SNIEIPLGRHTFLSKHSLSMKFTYADEKLAEYLGWSCEELMGQSVFEFYHALDNLALDKC
FKCLFSKGQCETVAYRFLGKRGGYAWVITQATLIHCSKQQKPISVVCVNYILSGIEHEDE
VYSVRQLATRDNDANLVKIEKPLPILLPTGSTVSTTDSCEISLNDEKIPIEESTVDDEPR
SDDRPLAVTASIFRSIDEKGDCKDDSQKDGVLSKHAQKEKAFVFLEKALKESLEESIKES
LKENDVPTTVNRQDCRQSFAKKAPFIFQGKSTVVSDSSDSAEHRDRPQSVTKHLFAPLAV
TVQQQEQQQQEQEQSQLSCRPQTATASIFAPRTEDMNKGFLTFSEDHPGLTMLKDEPEDL
THLAPTAGDVCVPLEDTPFLSDMLDEFIFGNDNYGCPLLSPGDTLTPELRSADLSGSLKD
ADLVDTTTRTKNAVDRLADSDPFMYGDSPGSPCGIDPSTMSPSLSKYRQSPERSVDSLGS
PIGGSGGDGLSEDEMLMLGISDSIGDEELALRAPYIPMSDQDEALEFLINDNMVMWSSSQ
SADKGSSKWLLDDREQRNSESSLVQLLRTDQAVSRRYNDHGGGLLNPTQILGQTPRKNIL
FESDRWSSNQERPNKRIHSGLNMDSENGYKRLKCENSTFERINLEDTLVTKQQRLSTTLH
KKSPPTLDNTCGSQLLRRLVSSQMPSIVSQVATLPDSNSHIRSDNERHREDFSKQRDRDL
DDIINFVESEGDRGGGGGGGENHGGIGDGLDKIATSRRRNPCSTGGSSVLMNLLVSGCDD
SLMSSRDMSTVLSSNLTPLSINVENQIVPHCTNTDVISLPDHLSPDTRKHLIGPFTGGGG
DGGTPIVSPTTPAMTSFDSFDWIRDGSSGLLQVGSDLLGGLLDRNLV
NT seq 3384 nt   +upstreamnt  +downstreamnt
atggacacccataagaaggagaagaaacacaaggagaaaaggaggagcaatgagaagagg
aaggagagatctcgcgatgcagcacgctgcagacgtagtagagaaaccgatatcttcacc
gaactcgcggccgcgcttccggtcgcgccggaacaagcagcgctcttagataaggccagc
gtaatgaggttggcgattgcctaccttaaagttcgagctgttgtggattccattccagtt
acgttgacaaaatctgagtcgtccgcaaagatggatgaattatttccaaaagctctcaac
ggctttatgttagtactctccggtgacggcaatatggtctacctgtcagagaatgtcaaa
gattatctcggagtgtcacaaatggatatgatgggacaaagtgtatacgaatacagtcat
ccctgcgaccatgatgaattgcgcgagtgcctatcttcgaagtcgacggataacaatgag
aaacgtacctgcaatttcttcttgcggttcaaatgtaccctcactagcaaaggcaggaag
gtcaatctgaaaagtgcttcttacaaggtgattcactgcaccggcaggttgacaaacatc
cgcgactcaaactcgaactctatggaagttgataatgaagagcaaagcaaagaggatgag
gacgcgggacaagacacagacatttctctggtgcttgtaggtagtcccataccacatccc
agtaatattgagatacctttaggacgccacacctttttgtcgaagcacagtctcagcatg
aaatttacttacgctgatgaaaaattggccgaatacttaggctggagctgtgaggagcta
atgggtcaatctgtcttcgagttttatcatgcactcgacaatcttgcactggacaagtgt
ttcaaatgcctgtttagtaagggccagtgcgagaccgtagcgtacagattccttggcaag
cgaggcggctacgcctgggttatcacccaggccaccctcatccattgctccaaacagcag
aagccgatctccgtcgtttgcgtcaattacatcctaagtgggatcgagcacgaggatgag
gtatacagcgtgcgccagctggccacgcgtgacaacgacgccaatttggtgaagatagag
aaaccgttgccgatcctcttgccgactggtagtaccgtgtcaacgacggattcgtgcgag
atatcgctgaacgacgagaagattcccatagaggaatcaaccgtcgacgacgagcccagg
agcgacgatcgaccgctcgccgtcaccgcgtcgatcttccgttcaatcgacgaaaagggc
gactgcaaagacgattcgcagaaggacggtgtcttatcgaagcacgcccagaaagagaag
gcattcgtttttctcgaaaaggctctcaaggagtccctggaggaatcgattaaggaatcg
ttgaaggaaaacgacgtgccgacaacggtaaaccgacaggactgccgacagtcctttgct
aaaaaggcacccttcatattccagggtaaatcgacggtggtaagcgattcatcagacagt
gctgaacaccgtgatcgtccccagtcagtcacgaaacatctgttcgcgccacttgcggtt
accgtgcaacaacaggaacagcagcaacaagaacaagaacagtcacagttatcctgtcgt
ccgcaaacggccacagcgagcattttcgcgcctcgtaccgaggacatgaacaagggcttt
ttgactttcagcgaggatcacccgggtctcaccatgttgaaggacgagccggaggacttg
acgcatcttgcacctacagctggagacgtgtgcgtgcctttggaggacactccctttttg
tcagatatgctggatgagtttatcttcggcaacgacaactatggctgtcctctgttgagt
ccgggcgacactctgacgccggagttacgttccgcagatctctcgggatccctcaaagat
gcggatctcgtggacactactaccaggaccaagaacgcagtcgatcgtttagccgatagt
gatcccttcatgtacggcgactcgcctggaagtccctgtggcatcgacccaagtactatg
tcgccatccctttcgaaataccgacaaagtcctgagcgcagcgtggactcattaggtagt
cccataggaggtagtggcggcgatggactttccgaggacgagatgcttatgttaggtatc
agcgatagcataggggatgaagaattagcgctcagagcaccctatattccgatgtcggac
caagacgaggcattagagttccttattaatgataacatggtcatgtggagctcgtcacaa
tctgctgataaaggatcctcgaaatggttacttgacgatcgagagcaacgtaattccgaa
tccagtctggtacaattactgcgaactgatcaagcagtatcgcggcgatacaacgatcac
ggtggaggtttactaaatccgacgcagatactgggacaaacgcctagaaaaaacatactt
ttcgaatctgatcgatggtcttctaatcaagaacgtcccaataaacgcattcactctgga
cttaatatggactctgaaaacggatataagcgtcttaagtgtgagaactcgacattcgag
cgtataaatcttgaagatactttggtgacgaaacaacagcggttatcaacaacgcttcat
aagaaatcgccaccgactctcgataatacctgtggtagccagcttctacgtcgcctcgtc
tcgtcacagatgccaagtatcgtgtcacaggtggcaactttgcccgatagtaatagccat
attcgcagtgacaacgaacgtcatcgcgaggacttttcaaagcagcgtgatcgcgacctc
gacgatattatcaattttgttgagtcggagggtgaccgcggtgggggaggaggcggaggc
gaaaatcacggcggtattggtgatggcctagacaagatcgcaacaagtcggagaaggaat
ccttgcagcactggcggtagcagtgtgctaatgaatctcctggtttctggctgcgatgat
tctttgatgagttctcgcgacatgtcgactgtactatcaagtaacctgaccccattatct
atcaatgtggaaaatcagatagttccacattgtacgaatacagatgtcatatctttgccc
gatcatcttagcccggataccagaaagcatttaatcgggccctttaccggcggtggcggg
gatggaggtactcctatagtttcgcccacgacgcccgcgatgacatctttcgacagcttc
gactggatccgcgatggatcctcgggcctgcttcaagtgggatcagatctactcggagga
ctactggatcgaaatctggtgtga

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