Cyphomyrmex costatus: 108775408
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Entry
108775408 CDS
T11118
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108775408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108775408
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108775408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108775408
NCBI-ProteinID:
XP_018397267
LinkDB
All DBs
Position
Unknown
AA seq
281 aa
AA seq
DB search
MPVDQKRINGPDVSTSYDIYIHSEAKNNKIHSNGSKRQDGRSDNEFRNIFLKTGIVSQAK
GSAYIELGDTKVICSVFDPREIPNKSGFCMQGELFCEFKFASFSHRKRKLHQQDAEEKEY
SLILQRALEPAVCLQEFPNFQVDVYATVLDNGGSALTAAIMAASLALANAGVPMFGLVTA
CTIGIYNGMYLVDPTDIEETICSTKAAPDATNDHGIVIQAALPQHGQISEMFVIGSINMD
TMKYSMDLSSKIHKDICPLLEQCLVKTVFKTFQSSSKRTNN
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgccggttgatcagaaacgtattaatgggccagacgtgtctacatcgtacgatatttat
atccactccgaagcgaaaaacaataagatacacagtaatggttcgaaaaggcaggatggt
cgctcagataacgaattcaggaatatatttttgaaaacgggcattgttagtcaggcaaaa
ggttctgcatatattgagttgggtgacaccaaggttatttgctcagtatttgatcctaga
gagataccaaacaaatctggcttttgtatgcaaggggaactattctgcgaattcaaattt
gcatccttctctcaccgcaaacggaaattacatcagcaggatgcagaggaaaaggagtat
agcttgatattgcaaagagctttggaaccagcagtgtgtctgcaagagttccctaacttt
caagtcgatgtctatgcaacagtcctcgataatggaggatctgcattgactgctgcgata
atggcagctagtctagctttggcaaatgctggagtaccaatgtttggtttagtcactgca
tgcactattggtatatacaatgggatgtatttagtagatccaacagatatagaagaaact
atttgttccacaaaagctgcgccagatgcgacaaatgatcatggaattgtcatacaagct
gctcttccacagcatggtcaaatttctgaaatgtttgtgataggcagcatcaatatggat
accatgaaatattccatggatctttcgagcaaaattcataaggatatatgtcccttatta
gagcaatgtcttgtaaaaactgtatttaagacatttcaatcaagcagtaaaagaacaaat
aattaa
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