Cyphomyrmex costatus: 108775443
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Entry
108775443 CDS
T11118
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccoa03009
]
108775443
Ribosome biogenesis [BR:
ccoa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108775443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
EIF3I
WD40_RFWD3
MIOS_WD40
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_SPT8
eIF2A
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
108775443
NCBI-ProteinID:
XP_018397319
LinkDB
All DBs
Position
Unknown
AA seq
483 aa
AA seq
DB search
MIIISLVVVAVTSNAGKSKTHNRIYHISKKMKEEPMEGVANEGESSESSDESIEDGNING
SQKETKSQVYLPGQALQEGEELTVDDSAYKLLHHAQSGAPCLSFDVIPDDLGNSRESYPL
SMYIVAGTQAGRTHINNLLVMKMSNLYGNKHSGDSESESSDSEDEDKSKPVMSVAPIKHQ
GCVNRVRCSKIGGGILAASWSELGRVNIWNLQEQLSAVENPSLLTAYRNKYDKGSTDIKP
LYTFKGHLSEGFGLDWNCIEPGTLASGDCKGNIHVWRIDVSGASWHVDQRPYNSHAPHSV
EDLQWSPSERNVLASCSVDKSIKIWDIRTSPQNACVLTVSGAHTADINVISWNQKESQFM
ISGGDDGMLCIWDLRQFGSNGASPVATFKQHTAPITTVEWHPTDATVFASGGADDQIAQW
DLSVEADHTGEPQDRVLAKLPPQLLFIHQGQLDIKELHWHPQCPGTIISTANSGFDIFRT
ISV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgataatcattagcctcgtggttgttgcagtaacctctaatgctggtaaaagtaaaaca
cataataggatatatcatatatctaagaaaatgaaggaagagccaatggagggtgtcgct
aacgagggcgagagcagtgagagtagtgacgagtctatagaggacgggaatataaatgga
agccaaaaggaaaccaaatcgcaagtgtatcttccaggtcaagctctgcaagaaggagag
gaacttactgtggatgattcggcatacaaattgttgcatcatgcacaatctggagcacca
tgcctcagctttgacgtgataccagatgatttgggtaattccagagagagttatccctta
agtatgtacatagtcgctggaacacaagctggcaggacacacatcaataatctccttgtt
atgaaaatgtctaatttatatggtaataaacattctggtgactcagaaagtgaatcaagt
gattcagaagatgaagataagagtaagcccgtcatgagtgttgctcctattaaacatcaa
ggatgtgttaatagagtgagatgtagtaaaattggtggaggaattctagccgccagctgg
agtgaactgggacgtgtaaatatctggaacttgcaagaacagttgagcgcagttgaaaat
cccagcttgctgactgcatatcgtaataagtatgataaagggagtacagacattaagcca
ttgtacacatttaaaggccatttatctgaaggatttggccttgattggaactgcatagag
cctggcactctagcatccggtgattgcaaaggtaacattcacgtatggcgaatcgacgtc
agtggcgcatcctggcatgtagaccaaagaccgtacaattcgcatgctccacacagcgtg
gaagatttgcagtggtcaccaagtgaaaggaacgttctggcatcatgttccgtagacaaa
agcataaagatttgggacatacgaacaagtccacagaatgcatgcgtgttaacagtgtct
ggtgctcacacggctgatatcaatgttatctcgtggaatcagaaagagagccagtttatg
atatcaggcggagacgatggtatgctctgcatatgggatttgcgacagtttggatctaat
ggtgcaagtccagttgctacttttaaacagcacaccgcgccaattactaccgtggaatgg
caccccacagacgccacagtgtttgcttccggcggagctgatgatcaaatcgctcagtgg
gatttgtcggtagaagcagatcacacaggagaacctcaagacagagtgttagctaagtta
ccgccacaactactgttcatacatcagggtcagttagatatcaaagagttgcactggcac
ccgcaatgtccaggaactataatatcgaccgcaaattcaggattcgatatattccgtacg
attagtgtctaa
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