Cyphomyrmex costatus: 108775621
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Entry
108775621 CDS
T11118
Name
(RefSeq) probable oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108775621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108775621
03009 Ribosome biogenesis [BR:
ccoa03009
]
108775621
Messenger RNA biogenesis [BR:
ccoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
108775621
Ribosome biogenesis [BR:
ccoa03009
]
Eukaryotic type
Pre-60S particles
RNases
108775621
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
108775621
NCBI-ProteinID:
XP_018397543
LinkDB
All DBs
Position
Unknown
AA seq
237 aa
AA seq
DB search
MIFARATGLLSKYLYRGTQRCLNNVKCSLISFKITLKNLSFYVNYAICTPAETRKEVKNE
KHIVWLDMEMTGLEVETCHILEVACFITNEQLELASDHLNIVINQPDKVLDNMSDWCKIQ
HKENGLIDECRLSKTTLEEAQQRTLNFLENHIPKGACPLAGNSVYMDRIFLKKYMPLIDN
YLHYRIIDISTIKDLARRWHPNISKGVPKKQHSHRAEHDIKDSLNELRYYRKNLFVS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgatctttgcgcgcgctactggattgctttccaagtacctgtatcgtgggactcaacgt
tgtttaaataacgtaaaatgttcacttatcagttttaaaattactctgaaaaatctttca
ttttacgtaaattatgcgatttgcacaccggcagaaacacgaaaggaagttaaaaatgag
aagcacattgtctggcttgatatggagatgacaggactagaagtagaaacatgtcatatt
ttggaagttgcatgcttcataacaaatgaacagttagagcttgcaagtgatcacttaaac
atagttataaatcaaccggataaagttttagataatatgtctgattggtgcaaaatacaa
cacaaagagaatggcttaattgatgaatgtcgattgagtaagactacattggaggaagca
caacaaaggacattgaattttttagagaatcatatcccaaaaggagcttgcccattggct
ggaaactcagtttacatggatcgcatattcctgaaaaagtacatgccgttgattgacaat
tacttgcactatagaattatcgacatcagtacaattaaagatttggctaggagatggcat
ccaaatataagtaaaggagttccaaaaaaacagcactctcacagggctgaacacgacata
aaagatagtttaaatgagcttcgttattataggaaaaatctatttgtatcataa
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