KEGG   Cyphomyrmex costatus: 108775822
Entry
108775822         CDS       T11118                                 
Name
(RefSeq) nuclear RNA export factor 1-like
  KO
K14284  nuclear RNA export factor
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03008  Ribosome biogenesis in eukaryotes
ccoa03013  Nucleocytoplasmic transport
ccoa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108775822
   03015 mRNA surveillance pathway
    108775822
   03008 Ribosome biogenesis in eukaryotes
    108775822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccoa03019]
    108775822
   03009 Ribosome biogenesis [BR:ccoa03009]
    108775822
Messenger RNA biogenesis [BR:ccoa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108775822
   mRNA cycle factors
    Stress granule specific factors
     108775822
Ribosome biogenesis [BR:ccoa03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    108775822
SSDB
Motif
Pfam: LRR_NXF1-5 Tap-RNA_bind LRR_8 LRR_4 LRR_9 LRR_LRWD1
Other DBs
NCBI-GeneID: 108775822
NCBI-ProteinID: XP_018397771
LinkDB
Position
Unknown
AA seq 338 aa
MTRHCIQRLTVSTKTLEGHDDRVGRPHGRDGRPHGHIKHRVSFKTHTPNNLARNLTFVNL
DDDIPMTSNNNSRQVIMNSNNRERGERWRTVPRGRNSPMPNRNFKGGQSGPRRLPPLRES
NWYRVSIPYGQKYERDFIINTLLNYIAPNVFVPIVYKTSAIDASFYIDDYKTAIALQNCD
YKITMSDGFKLQVKVKPGFPIYDIDDKLKERLKQAMVKRYVQDTNALNLSKFYLDPDLCS
DYFCVLFHPVMMKTVLDIVAEHIPNLEALNLEGNKLQNIERLSILTKKFSKLKILYIGDN
KIRDIHQLDAIKDLKLEELKLTGNPVCNKYKSRQNDYV
NT seq 1016 nt   +upstreamnt  +downstreamnt
atgactagacattgtatacaaagattaacagtttcaactaagacattagaaggtcatgat
gatcgagtaggaagaccccatgggagagatggaagaccccatggtcatatcaagcaccgt
gtgtcatttaagacccatacgcctaacaacttggctcgtaatttgacatttgttaatttg
gatgacgacattccaatgacttcgaataacaattcgagacaagtgataatgaattcgaat
aatagagaacgaggggaacgttggcgaactgttcctcgtggcaggaacagtcctatgcca
aatagaaattttaagggaggtcagtcaggtcctagacggcttcctcctttaagagaatcc
aattggtatagagttagtataccatatggtcagaagtacgaaagggattttattataaat
acccttttgaattacattgcgcccaatgtatttgtacccatagtgtacaagacatctgca
attgatgccagtttctatatagacgattataagacggcaattgcattgcaaaactgtgat
tataagatcacaatgagtgatggatttaaattgcaagtgaaagtgaaaccaggatttcca
atttatgatattgatgataaattgaaggaaaggttaaaacaagcaatggttaagagatat
gtacaagataccaatgctttgaatttgtccaagttctatcttgatcctgacctttgctct
gattacttttgtgtattgttccatccggttatgatgaagactgtgttggacattgtagcg
gaacacataccgaatttagaagctttgaacttagaaggaaataagttgcagaatattgag
agacttagtatactgacaaagaaattctcaaaattgaaaattttatatattggtgataat
aagatcagagacattcatcagttagatgctattaaggatttaaaactggaggaattgaag
ttaactggaaatcctgtctgtaacaagtataaatctcgacaaaatgactatgttag

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