Cyphomyrmex costatus: 108775893
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Entry
108775893 CDS
T11118
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03013
Nucleocytoplasmic transport
ccoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108775893
03015 mRNA surveillance pathway
108775893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108775893
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108775893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
108775893
NCBI-ProteinID:
XP_018397855
UniProt:
A0A151IQA6
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MSFHSERKKVETNKVNDMDITSDFACLKVSALKKASHISAITKMDRITIGPQSTLNEEDS
NKADNIENEQNSCNIKSPYRFVTSPKHNMVSTSNGIHFSVHKIVAEKEVQRKEEVRKVIE
RRIQHMNENARVIQEEMENSRSSMARERERRSKEKLEYFLAEEERLAEQEEIKRRHEQQL
QAQRDQEQKEKLEREVEEYRKRMKEKELLKTVSIHRDQFMAKYCDLVALSKTCKDQQMFN
AIFTAHTATIRDMLQQIEAIDEKIRNGELIPADENLIEGLVCHFSNILNVFRTESEKINA
QYEAELARKAQVASEILLVKGTGNVPVNNAIPYQQSDESNVVKNKEEDGSFNVITNQEVV
VVTSVNEVDAPSVSDPQSEEIKDTACKKGDPFEYVDQDSLQIYIRSHQFLNHYRETCKDF
LQSPATKKFRFECQKAINIPVNAISGVSEQHLRDKYDRLQNLLTGKLMPNITQHPQGVIF
CKNHLAKKIVSQGETLVSSKPEMAFPVAMIVVALWNEHPDFGELFLAHLHEACPFTIPVF
LQQQEGQSNEDYYKSLGCKYSEDGTVEKQDKFLKRMSGLIRLYASITVTKQRKSVTKVHP
HGLQHSWRWLAAVLNIEPRADICDLCATLILDMLEVAGNVLWTSYPKQFYKLLTLLMEQY
FPRMRNVAGGGGGPLVRLEEFLNNALSSGIIRLANGMLPPNFL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcattcagagaggaagaaagtggaaaccaacaaggtgaacgacatggatatc
acatcagactttgcttgtcttaaggtatctgcattaaagaaggcatcgcatatatcagcg
attacaaaaatggatcgtatcacaattgggcctcaatcaacactgaatgaagaagattct
aacaaagcagacaacattgagaatgaacaaaattcctgtaacattaaaagtccatataga
tttgttaccagtcccaaacacaacatggtgtccacttcaaatggcattcatttttcggtc
cataagattgtagcagagaaggaggtgcaaagaaaagaagaagtcaggaaagtaatagag
cgtcgtattcagcacatgaacgagaatgctcgtgtcattcaggaagaaatggaaaattcg
cgctcatcgatggcacgtgaacgcgaacgccggagtaaagagaagttggaatatttctta
gctgaagaggaacgattggcagagcaggaagagatcaagaggcgacatgagcaacaattg
caagcacaacgtgatcaagagcaaaaagaaaagcttgaacgagaagtggaggaatatcga
aaaagaatgaaagaaaaggaactgttgaagactgtgtcaattcatcgagaccagtttatg
gccaagtactgtgatctcgtggcattatccaaaacctgcaaagaccagcaaatgttcaat
gcaatctttactgcacataccgcgacgataagagatatgctccaacaaatcgaagctata
gacgagaaaatcagaaatggagaattgataccagcagatgaaaatcttatcgagggtttg
gtttgccacttcagtaatatattaaatgtatttcgtacagaatcagaaaaaataaatgct
caatatgaagcggaattggctcgaaaagcgcaagttgcaagcgagatactgctagtcaaa
gggacaggcaatgttccagttaataatgcaataccttatcaacaatcagatgagagcaat
gttgtaaaaaacaaggaggaagacggtagtttcaatgtgataacaaatcaggaagtagta
gtagttacatcagttaacgaagtagatgcaccgtctgtatctgatcctcaatcagaagaa
attaaagatactgcatgtaaaaaaggcgatcccttcgagtatgtcgaccaagattcattg
cagatttacatcaggagccatcaattcttgaatcattatagagaaacttgtaaagacttt
ttacaatcgcctgcaacaaagaaatttcgctttgagtgtcaaaaggcgatcaacatccct
gtaaacgcgatttctggtgtaagcgagcaacacttgagagataaatatgacagactgcag
aatcttttgactggaaaattaatgcctaacataacacaacatccacaaggagtaattttc
tgtaaaaatcatctggcgaaaaagatagttagtcaaggcgagactttggtgtctagcaaa
ccagaaatggcatttcctgtagcgatgattgttgtggctctttggaacgaacatcctgat
tttggcgaattgtttctggcgcatcttcacgaagcgtgtccgttcactataccagttttt
ctgcagcaacaagagggtcagtccaatgaagattattacaaatctcttggttgcaaatat
tctgaagatggcactgttgagaagcaagacaaattcttaaagaggatgtcgggattaatt
agattgtatgcgtcgattactgttacgaaacagcggaaaagtgttaccaaagttcatcct
cacggtcttcaacattcctggagatggctagcggctgttttgaatattgaaccacgagcc
gatatttgtgatttgtgcgcgactttgatactggatatgcttgaggtcgccggtaatgtg
ctgtggacctcttatccgaagcaattttataaattgttgacactattgatggaacagtat
tttccgcgaatgcgtaatgttgcgggcggtggtggcgggcctctagtacggttagaagaa
tttctaaacaacgctctgtcatctggcatcatacgtcttgccaacggaatgcttccaccg
aactttttgtga
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