KEGG   Cyphomyrmex costatus: 108776050
Entry
108776050         CDS       T11118                                 
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108776050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccoa03019]
    108776050
   03036 Chromosome and associated proteins [BR:ccoa03036]
    108776050
Messenger RNA biogenesis [BR:ccoa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     108776050
Chromosome and associated proteins [BR:ccoa03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     108776050
    COMPASS/SET1 complex (yeast)
     108776050
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd EIF3I WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_VPS8 DSE1_N Beta-prop_NOL10_N Beta-prop_WDR75_1st PAC11 CFAP251_N WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WD_LRWD1 Tricorn_2nd Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 TRM82_WD MIOS_WD40 PROPPIN MinC_C WD40_like Arylsulfotran_2
Other DBs
NCBI-GeneID: 108776050
NCBI-ProteinID: XP_018398059
UniProt: A0A151IGB4
LinkDB
Position
Unknown
AA seq 315 aa
MKLVDHVVRSFKVAKVFRENTDRINSIDFSPNGDTLISCSEDDQIVIYDCEKGTQVRTVN
SKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHSKKVVSLCISPIED
TFLSGSLDKSLRLWDLRSPNCHGVMNVSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFD
KGPFVTFKLSQEKECDWTGLKFSRDGKTILISTNGSTIRLIDAFHGTPLQTFAGHLNNKG
IAIEASFSPDSQFVFSGSTDGRVHVWNAETGYKVCVLNGDHPAPVQCIQFNPKYMMLASA
CTNMAFWLPTIDENA
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagctcgtcgatcacgtggtgaggagcttcaaggtggccaaggtattccgcgagaac
acagatcggataaacagtatcgatttctcgcctaacggcgacaccctgatctcctgctcc
gaggacgaccagattgtcatatatgactgtgaaaagggtacccaggtacggacagtcaat
tcgaagaagtacggcgttgacctgatacacttcactcacgcgaagaacaccgcgatacac
agcagtaccaaggtcgacgacacgatccgctatctcagcctacatgacaacaagtatata
cgttactttcctggtcactcgaaaaaagtagtgtcgctctgtatcagtcctatcgaggat
acttttctctctggttctttagacaaatcattgagactgtgggatctacgctcgccaaat
tgtcacggggtgatgaatgtctcaggacggccggtagcagcatatgatcctgaaggtctt
atctttgcagctggagtcaactcggaaagtatcaagctgtacgacctacgtagcttcgat
aagggcccgtttgtcactttcaaactgtcgcaggagaaagaatgtgattggactggatta
aagttcagcagagacggcaagaccatcttgatctctactaacggtagtacgattcgttta
attgacgcttttcatggtacacccttacagactttcgctggacatctcaacaacaagggg
attgccatagaggccagttttagtccggattcccaatttgtgttcagtggctccacagat
ggtagggtacacgtgtggaacgcggagaccggttacaaagtttgcgtattgaatggtgac
catccagcaccggtacagtgtatccaatttaatcccaagtacatgatgctagcgtctgcg
tgcaccaacatggctttctggctacccaccatcgatgaaaacgcataa

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