KEGG   Cyphomyrmex costatus: 108776420
Entry
108776420         CDS       T11118                                 
Name
(RefSeq) splicing factor 1-like
  KO
K13095  splicing factor 1
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108776420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccoa03041]
    108776420
Spliceosome [BR:ccoa03041]
 Complex A
  Other components
   Complex A specific factors
    108776420
SSDB
Motif
Pfam: SF1-HH KH-I_KHDC4-BBP KH_1 zf-CCHC KH_12 zf-CCHC_5 AP3D1 Adeno_PIX
Other DBs
NCBI-GeneID: 108776420
NCBI-ProteinID: XP_018398529
LinkDB
Position
Unknown
AA seq 617 aa
MNQSRNFTSLLNPSYLQNAQQQQQQNVTTSAAAAAAAAAAAVSAAIANGTQAGINAVNVV
TQNRKREAEGDSKQEKELKEDRKKRKKTRWSGSEHDKTFIPGMPTVLPTNLTPDQERAYL
FQLQIEEISRKLRTGDLGIPLNPEERSPSPEPIYSSDGKRLNTREYRTRRKLEEERHNLI
QKILKINPEFKPPPDYKPPIIRVHDKVMIPQEEHPDINFVGLLIGPRGNTLKSMEKETGA
KIIIRGKGSVKEGKVGRKDGQPLPGEDEPLHAYITANNLDAVKKAVERIHEIIRQGVEVP
EGQNDLRRNQLRELALLNGTLRENDGPRCTNCGASDHKSWLCPDKPNVTNNIVCSSCGGA
GHIARDCRSKRPGQGGPAAAGMGGMGQAGDKAKIDEEYMSLMAELGEGPPPDRSKTGQNR
QTPNPNYPGLFDRQQPPRALMAAPAHPPPQMMQSGPMMPPPGMAPPPWSQGSEGMNNMNM
QWQPPVSMPPPPGVMQPPPPPPGSTTQPNIPPLMPWMTGNNQPPPPGQMPPTQIPPPGMG
IPPWQQGQQGPMRPPPPGTAPPPGFPGSWQPQQMGGWPPAAPVPPPPQQQTPAPPGIDLN
TLPTLLAQPPPPPPPTS
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgaatcaatcgcgtaatttcacgtcgctgctgaatccaagctacctgcagaacgctcag
cagcaacaacagcagaatgtcacgacctcggcagcggcggcggccgcggctgccgcggct
gcggtgagtgctgcaatcgcgaacggcacgcaggcgggcattaacgcggtcaacgtcgta
acgcagaatcgcaaacgggaagcagaaggtgatagtaaacaggagaaagagttgaaagaa
gatcgtaagaagaggaaaaagactagatggagtggtagcgaacatgacaaaacatttata
ccaggaatgccaacagtactaccgacaaatctgactcctgatcaggagagggcttatctc
tttcagctgcagattgaggaaatcagcaggaagctacgcactggagatcttggcatccca
cttaaccctgaggaaagatccccatctccagagcctatttacagtagcgatggtaaacgg
ttgaacacgagagaatatcgtacaagacgtaaattagaggaagaacgtcataatctgatt
cagaagattcttaaaatcaatccagaatttaagccaccaccagattataagccaccaata
atacgagttcatgataaagtaatgattcctcaagaagagcatcctgatataaattttgtt
ggtttacttattggaccgcgtggaaatactttaaaatctatggaaaaggaaactggtgca
aagattataattcgtggaaagggttctgtgaaagaaggaaaagttggtcgaaaagatgga
cagcctttaccaggcgaagacgaaccattgcatgcatacattactgcaaacaatttagac
gccgtgaagaaagctgtggaacgaattcacgaaattattcggcaaggtgtagaagtacca
gagggtcaaaacgacttgcgacgtaatcaactacgcgaattagctttattgaatggaaca
ttacgcgagaacgatggacctcgttgtaccaattgtggtgcttcagatcacaagtcttgg
ctgtgtcccgataaaccaaatgtgacaaacaacatagtgtgttcaagttgtggtggtgca
ggacatattgctcgagattgcagatcaaagagacccggtcagggaggtccagcagccgct
ggaatgggaggaatgggtcaagctggagacaaggccaaaatagatgaggagtacatgtcg
ctcatggcggaattgggagaaggcccgccaccagatagatcaaaaacaggacaaaacaga
cagactcccaatccaaattatcctggactttttgacagacaacagccacctcgtgcatta
atggcagctccagctcatcctccgccacagatgatgcagagcggcccaatgatgcctcca
ccgggtatggctccgccgccgtggagtcaaggaagcgaaggaatgaacaacatgaatatg
caatggcagccaccagtgagcatgccaccaccaccaggtgtgatgcagccaccaccaccg
ccgcccggttccactacgcagccaaacattccaccactaatgccatggatgacaggtaac
aatcaaccaccgccacctggccaaatgccgcccacgcagattcctccacctgggatgggc
ataccgccgtggcaacagggtcaacaaggaccgatgcgaccaccaccgccaggcacagca
ccgcctccgggatttcccggtagctggcaaccgcaacaaatgggtggctggccaccagct
gcgcctgtcccacctccgcctcaacaacaaactcctgcgccacccgggattgacttgaat
acactgccaacgttattagcgcaaccacctccgccacctccgcccactagttag

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