Cyphomyrmex costatus: 108776439
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Entry
108776439 CDS
T11118
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108776439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108776439
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108776439
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108776439
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108776439
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
108776439
NCBI-ProteinID:
XP_018398555
UniProt:
A0A195CG66
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MDEVDNAQIIVIADDVCRRVGIATTWISSNRFGIHAYKHVDKYSQDIRSQFAPCDARVHF
LRPEIILFSPLLRKLVNESNGIFLSIQKLKSSSGDIRPELLKHSKQYRSILRACVENLQE
ILPKEPLSEEKTMLENFLTIFYQVECVWHLTEILYVDVVPGDVVLPQLLEWISFHFPSRE
LAASKILSQKVICADLENINYWEAVMGCAFHGKLNLVCRLLGLHSKADHSAFITADNIIR
TMPVYNVYGGYSVNEFIIQWKHWQMDLCSNLETNCFVIDNNLEMLMKLIAGDDSVLWEYS
IYTEAWYELLAAKLFYSAPCCKQLELSRYANSIAERWQANRHLDRVILALMENDLYQVIK
EIQYMSDNGWFAAHLMDLLYKCGKLNILSKEKTNVTAQLHESLILEYGTTLMSHRSLWQC
GASYLIHCPTQGLARLEILLQSLSTGTEARINKIIDVARDNNMPHVVTSICKIQGMKSIR
QGRLGNALTWALKAHDGNFTTYIADQFLKHYAEYGELECRDLLENLGSCMLASDRLTFLG
KYCEFHHMYGMDEYREAASLLVSLLVSNLTPKYFWSILLTDAIPLLEAEDVIFSSNDCYE
LLRCVEAHGDDPKFQDKVSIFRIGVARNLARALSLEGCQAEH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagttgacaatgctcaaataattgttatcgcagatgatgtttgtagaagagta
ggtattgcaacaacatggatcagtagcaatagattcggaatacatgcatacaaacatgtg
gacaaatattcacaagacatcagaagtcaatttgcaccttgtgatgccagagtacatttc
ctccgaccagaaatcatattattctcaccacttttacgtaaactggttaacgagagcaat
ggtatctttctgtcaattcagaagcttaaatcttcttctggcgacattaggccagagctt
cttaaacatagcaaacaatatagatctatattgagagcttgtgttgaaaacttgcaagag
atattaccaaaggaacctttatcagaagagaagactatgctagaaaattttctcactata
ttttatcaagtagaatgcgtttggcatttgacagaaattctttatgttgatgttgtacca
ggtgatgttgtgctaccacagttgttggagtggatcagcttccattttccttctagggaa
ctggcagcatcaaaaattttgtctcagaaagttatctgtgccgatttagagaatattaat
tattgggaggctgtaatgggctgtgcattccatggtaaactaaatctagtttgccgcctc
ctgggattacacagtaaagcggatcattcagcatttattactgcagacaatattatcaga
acaatgccagtttacaatgtatatggtggatattccgtaaacgaatttattatacagtgg
aaacattggcaaatggatctttgttcaaatttggagaccaactgctttgttatagataat
aatctggaaatgcttatgaaattgatagcaggcgacgattcggtattatgggaatattct
atatacacagaagcatggtatgaattgctggcagcaaaattattttactcagctccttgc
tgtaaacagctggaactttcacgctacgcgaatagcattgctgagagatggcaagctaat
aggcatttggatcgtgtaatccttgcattaatggaaaatgatttgtatcaagttattaaa
gaaatacaatatatgagcgataatggttggtttgcagctcatctcatggatctattgtac
aaatgtggaaaattaaacattctcagcaaagaaaagactaatgtgactgcacagcttcat
gaatctcttatattggagtatggcactacactgatgagccatcgctcgttgtggcagtgt
ggcgcaagttacttgatacattgccccacacaaggtttggctcgactagaaattttgtta
cagtcgctatcaacaggcacggaagcgagaatcaacaaaattattgacgtcgcgcgagat
aataatatgccgcacgttgttactagtatatgcaagatccaagggatgaaaagcataagg
caagggagattgggcaacgctcttacatgggcgcttaaagcacacgatggtaactttacc
acatacattgcagaccagtttttaaagcattatgcggaatacggggagttagaatgtcgc
gatttgttagagaacttgggctcctgcatgttggctagcgacaggctcacgtttttggga
aagtattgcgagtttcatcatatgtacggaatggacgaataccgtgaagcggcgagtcta
ttggtgtcccttttagtttcaaatttaactccgaagtatttctggtctatcctgctcacg
gatgctataccgctgttagaagcagaagatgtaatcttttcttcgaacgattgctacgaa
ttgctacgttgcgtggaggcacacggcgacgatccaaaatttcaagacaaggtttccatc
ttccgaataggcgttgcacgaaatctggcacgagctttgagtctagaaggttgtcaggca
gaacattga
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