Cyphomyrmex costatus: 108776453
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Entry
108776453 CDS
T11118
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-B isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108776453
04121 Ubiquitin system [BR:
ccoa04121
]
108776453
Enzymes [BR:
ccoa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108776453
Membrane trafficking [BR:
ccoa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108776453
Ubiquitin system [BR:
ccoa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108776453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-C3HC4_3
zf-ANAPC11
zf-RING_Vps41
HypA
EcdD_BsdD_detox
Motif
Other DBs
NCBI-GeneID:
108776453
NCBI-ProteinID:
XP_018398567
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MAEAVVDGSPMSRFFCHKCSVEIERLLPNYTCPRCASGFIEELESSSNEGSSGVDMNSEE
LSDGDIDILTLNRSDRDRDIIEMIMGLSNTYTNQQLNTSQQPGGGNRNYVLGSRRRSNWS
RNPQDGRRTSSSNRRRQESLQVPIENFIQDFIFNLSGAASLSNSVGQDAQPSVFNVRLFL
GNPGDYVWGRDGLDAIVTQLLNQMDGTGPPPLSRNQIDEIPTTTITQSQVDCKLQCSVCW
EDFKLSEPVRQLPCQHVYHAPCIVPWLELHGTCPICRQNLGDQNQAEANQDAGANIAGST
LAGSSFAALFRAANEAHRTGQPISRTSSTSSSTSSTSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggccgttgtggatggaagtccgatgtctcggtttttttgccacaaatgcagc
gtcgaaatcgagcgtctgctgccgaattacacgtgtccacgatgtgcaagtggtttcatc
gaagagctggagagcagcagcaatgagggtagctcgggcgtggatatgaacagcgaagaa
ctgagcgatggggatatcgatatcttgaccttgaatcgctccgaccgtgatcgtgatata
atagaaatgataatgggtctctcgaatacatacaccaatcaacagttgaacaccagtcaa
caaccgggtggaggcaatagaaactatgtgctcgggagcagaaggaggtctaattggtcc
cgtaatcctcaagatggacgtcgcaccagcagtagcaatcgtagaagacaagagagccta
caggtgcctatagagaatttcatacaagattttatcttcaatctttcgggagcagcgagt
ctaagcaactctgtgggtcaagatgcacagccatcggtattcaatgttagactgttcttg
ggaaatcctggagattatgtttggggtcgtgatggattagacgctattgttacccaatta
ttgaatcaaatggatggtactggaccaccacctttgtcacgcaatcagatcgatgagata
cctactactactataacgcaaagtcaagttgattgcaagctacaatgttccgtttgttgg
gaagattttaagctgtccgaacctgttagacaattaccctgccagcacgtctatcacgca
ccatgtattgtaccttggctggaattacatggaacctgtcccatttgcagacaaaatttg
ggagatcaaaatcaggcagaagcaaaccaagatgctggagccaatatagctggatcgact
ttagccggatctagttttgctgctttgtttagggcagcaaatgaagcgcaccgaacagga
cagccaattagccggacatcgtctacttcgtcatctacttcctctacttcagagtag
DBGET
integrated database retrieval system
