Cyphomyrmex costatus: 108776505
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Entry
108776505 CDS
T11118
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccoa03021
]
108776505
Transcription machinery [BR:
ccoa03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
108776505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRN3
FNIP_C
Motif
Other DBs
NCBI-GeneID:
108776505
NCBI-ProteinID:
XP_018398637
UniProt:
A0A195D5E5
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MSVVSSRTVSSVSSMLKDSGVRAQFIKQPDKIYKPPKDIKDILHNYKGIRKKEYDKLIHS
LKNCVVKDSNLAEFINETMQYISLLDNEHKLFVEALLQIDWTTRSSQVIFTYKLFLQNLA
CMQTFHTNIVINCLVELFKPKNNTEHEIGQFKDEDIERLNHIHDILREILRVVPMSNNDL
LEAIELHFPFHLIHGTYVHEIYLHALLEMLNYAPQLRRNMFILIIQKLVTLDVNIPCEEA
NNKDIVEDDCINNGTSDNDNLTKINSDTDKSRTVHPVARILDSCMELFFKFIHEFCFVND
VLQIKNLEILCNDIVYAFEKEILNMYGIRYVQYIMFYICSFGFSTIKEKFINWLWQMVVK
PNPTVPPIYRQTAICYISSMLATASFISPQLVETMISKMTQWLNKYITSQECSEYIEDCA
KHVVFYSVCQAFFYLFVARYKHFVFDLKYEKFLQNLSLSISKIVTCKLNPLKMCDTKIVH
AFAQTTRTYGLAYCDTVIEYNERNQLPIFGMESHLSVSIPNFFPFESYTLEHSRRRIAPL
FYNNAANTDCSSVNKYE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtatcctcaagaactgtcagcagtgtgtcatctatgctgaaagacagtgga
gttagagcgcagtttattaaacaacctgacaaaatatacaaacctccaaaagatattaaa
gatatattacataattataagggtattagaaaaaaagaatatgataagttgatacattcg
cttaaaaattgtgttgtaaaggatagcaatttagcagaattcataaatgagacaatgcaa
tatatctccttgttagataatgaacataaattgtttgttgaagcacttcttcaaattgac
tggacgactagatcatcacaagtgatttttacatataaactctttttgcaaaatttagct
tgtatgcagacgtttcatacaaatattgtaataaattgtctcgttgaattgtttaaacca
aaaaataataccgaacatgaaattgggcaatttaaggatgaagatatagaaaggctaaat
catatacatgatatattacgtgaaattttgagagtagtaccaatgtcaaataatgatttg
ctcgaagccatcgaattacattttccatttcatcttatacatggcacttacgtacatgaa
atttatctccatgcattattagaaatgctaaattatgcacctcagctaagaagaaatatg
tttatccttattattcaaaagctagtgacgttggatgtcaatataccttgtgaagaagca
aacaataaggacattgtagaagatgattgtattaataatgggacaagtgataatgataat
ctgaccaaaattaacagtgacacagacaaaagcaggactgtccatccagttgcacgtata
ctagactcatgcatggaattatttttcaaatttatacacgagttttgttttgtgaatgac
gttctgcaaataaagaacctagagatactatgtaatgatattgtctatgcattcgaaaaa
gaaatattaaatatgtacggcattcgatacgtacaatatatcatgttctacatatgcagt
tttggattttctacaattaaggaaaagtttataaattggttgtggcagatggtggtgaaa
cctaatcctacagtgccaccgatttatcggcaaacggctatttgttatatttctagtatg
cttgccactgcctcatttatctctccgcagttagtggaaacaatgatatctaaaatgacg
caatggctgaacaaatatatcacctcgcaggaatgttcggaatacattgaagattgtgca
aaacatgttgtattttactctgtttgtcaagcgttcttttatttatttgttgcgaggtac
aagcattttgtatttgacttaaaatatgaaaaatttcttcagaatctttctctttcaata
tccaaaattgttacttgtaaattaaatcccttaaagatgtgcgataccaagattgttcac
gcttttgcccaaactacaagaacatatggactagcctattgcgatactgtaatcgaatat
aatgagcgcaatcaattacctatttttggaatggaatcccatttgtctgtttcaattcct
aattttttcccgtttgaatcttatacattagaacatagtagacgaagaatagctccttta
ttttataataatgcagcaaatactgactgttcatcagttaataaatatgaataa
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