Cyphomyrmex costatus: 108776561
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Entry
108776561 CDS
T11118
Name
(RefSeq) poly(rC)-binding protein 4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108776561
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
108776561
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
108776561
NCBI-ProteinID:
XP_018398717
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MDGMDNKPVLNDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPE
RIVTVTGPTNSIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQC
GSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLES
PPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDVSTVLPLPAPAAGPAPPSLN
TQTLTTSPFAAHPSSSAFAASHGHPLLSTAHLTTPHHPLHPSPLHASVAGLADPLLKSGH
LQAALPPAHLVADAMGKLGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSN
TNRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRT
ITITGNPDAVALAQYLINMSVELQKANLEAQNTQTPGSGTTPGASGASASPSTTTTTASP
LASAIPLAQLLSKPGALNALSSLTALGGLTELLGGAAGAAASALPVQTTGVHRSHKTFTP
RLRSPGAPGPTDSGKFKSERTKYNPY
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatggacaacaaaccggtgttgaacgatgatccctcggtcactctgaccatc
cgcctgattatgcagggcaaagaagttggtagcattatcgggaaaaaaggagaaattgtc
aaaaggttccgtgaagaatccggcgcgaaaatcaatatctccgatggttcctgtccggaa
cggatagtgactgttaccgggccgacgaactcgatcttcaaggcgttcacgctgatatgc
aagaagttcgaagagtggtgctcccagtttcacgatattcagggtggcggtgccggtggt
ggcggtggtgtatcgaggccgcccatcacactcagactgattgttcccgcttcgcaatgc
ggttccctgatcggcaagggtggttccaagatcaaagaaattcgggaggttactggtgcc
tccattcaagtcgcttccgagatgttgcctaattcgacggaacgtgcagtaaccatatcc
ggtaccagcgaggcaatcacgcaatgcatatatcatatctgttgcgttatgctagagtcc
cctcccaaaggtgccacgatcccttatcgccccaaaccccaagtcggtgggccagtgatc
ctggctggtgggcaagcctacaccatccagggtaattacgcggtgcccgcccactcggac
gtaagtacagtattaccattgcccgcgcccgctgccgggcccgccccgccctcgctgaat
acccaaactttgacgacctcgcccttcgcggcccacccctcatcctcggccttcgccgct
tctcacgggcacccgctcctatccacggcccatcttacgaccccacatcatcctctccac
ccgagccccttacacgccagcgtggcaggcctcgccgaccccctgctgaagagtggacac
ttgcaggcagccctcccgcccgcacacctcgtggcagacgccatgggcaaactgggcagc
aatcctttggctggactagcagccttaggccttggaggtcttgccacaccagcgaacacg
ggtggtcttaatccagcagcgttagctgcattggctggaagccagctgcgtacgagcaac
acgaacaggcagcaaccggcggcaaacaatcagacgcatgagatgaccgtgccaaatgag
ctgatcggttgcatcatcgggaagggcggtaccaagatcgccgagatccgtcagatctcc
ggcgccatgatccgaatcagcaactgtgaggagagggagggcggagcaacggaccgcacg
atcaccataaccgggaacccggacgccgtggcgttggcacaatatctcatcaacatgagt
gtcgaactgcagaaagctaacctagaggcccaaaatacccaaacccctggcagcggtacc
actcccggagcatccggggccagtgcttccccctctaccaccactaccactgcctctccc
ttggccagcgccatccccttggctcagctgctaagcaagccaggcgccctcaacgcccta
tctagcctcaccgccctcggcggactcacggaattgctaggtggtgctgctggcgcagct
gcatccgcgctaccggtccagactaccggcgtgcaccgatcgcacaagacctttacgccg
aggctccgtagcccgggcgcaccaggcccgaccgacagcggcaagttcaagtccgagcgt
accaagtataatccgtactga
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