Cyphomyrmex costatus: 108776649
Help
Entry
108776649 CDS
T11118
Name
(RefSeq) protein lozenge-like
KO
K20214
RUNX transcription factor Lozenge
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04013
MAPK signaling pathway - fly
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
108776649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoa03000
]
108776649
Transcription factors [BR:
ccoa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
108776649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Runt
Motif
Other DBs
NCBI-GeneID:
108776649
NCBI-ProteinID:
XP_018398830
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MHLPVGSVGCGENYGTVGSHEGAGPCGPSLAPLQGVNSRYHQVDDADAGGGGGEMSESAA
VGELWWTERLVGEAQAEHPGELVRTGSPYFLCSQLPTHWRSNKTLPVAFKVVALGEIGDG
TLVTVRAGNDENCCAELRNSTALMKNQVAKFNDLRFVGRSGRGKSFSITITVSTTPPQVA
TYTRAIKVTVDGPREPRSKTRQQHQQFRALGLGQRPFLDAPTSFRSHLRELESFGRNKHH
HHHSSSHLHDQQTGNNVTTNSVSGACTNPNNTDPTASPASSTHLGATGGSSVHHDCYKRS
PQHGDTGIGTTEWAYPSTAPSYPAPPVSSSGSYSPLPGGAFSYPGESLSHHPTTEPVPLP
TVLPSETQQDTYTPNCVSMYSGHGTSPTTSLPLVPTRPSDPDIFASGGTGSAGSPGYHYS
SWTPGPATPVPVASHNYNPNYQGYYNNPSQNYITGPTPMVLYPQLYSTVNQNQIHLHLHG
DLSEEQVTIAGGNLTISSIREIGVLGEESEQRNDVWRPY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaccggtgggttccgtgggctgcggggagaattacggcaccgttggatctcac
gaaggcgccggcccgtgtggtccctccctggcgccgctgcaaggtgtaaacagcaggtac
caccaagtagacgacgccgacgccggaggtggaggcggcgaaatgagcgaaagtgccgcc
gtcggcgaactatggtggaccgaaaggctcgtcggcgaagcgcaggccgagcatcctgga
gaactggttaggacaggctcgccatactttctgtgcagtcagctaccaacgcactggcgg
tccaacaaaacgcttccagtggcatttaaagtggttgccctcggcgagattggcgatggg
accctagtgacagttcgagctggtaatgacgagaactgttgcgccgaattacgaaactcc
accgcgttaatgaagaatcaagtcgccaaatttaacgacctcagattcgtcggcagaagt
ggcagaggaaaaagcttcagcatcaccattaccgtgtcgacgacaccaccccaagtagcg
acctacacgagggcgattaaggtgaccgtcgatggaccacgggagccacgatcgaaaacg
aggcagcaacatcagcaatttcgcgcgctcggtctaggacaaaggcccttcctcgacgcg
ccgacctcattcaggtcccacttgcgagaactcgaatcgttcgggaggaataagcatcac
catcatcacagcagcagtcacttacacgaccagcagactggcaacaacgtcaccacgaat
tcggttagcggtgcctgcaccaaccccaacaacaccgacccgaccgcatcgccggcttcc
agtacacacctcggggctactggcggctcttccgttcatcacgattgctacaagcgcagt
cctcagcacggcgacacgggtatcggtactacagaatgggcttatccatccacagcaccg
tcttatccggctcctccagttagcagcagtggttcctattctcctttacctggcggtgca
ttttcatatccaggggaatcattgtcacatcatccaacgacggaaccggtgccattgcca
accgtacttccttcggaaactcaacaggatacctacacgccgaattgcgtgtccatgtac
tcaggacatggcacttcgccgaccacgtccttgcccttggtgccgaccagacccagcgac
cctgacatctttgctagcggtggcacgggtagtgcaggtagtccgggttaccattacagt
tcctggacacctggtccggcgaccccagtcccagtggcttcccacaattacaaccccaat
tatcaaggctactacaacaatccgagtcagaattacatcacaggcccgacaccaatggtc
ctctatcctcagctctacagcaccgtcaatcaaaaccagattcatctgcatctgcacggc
gatctgagcgaggaacaggtcactatagccggtggcaatcttaccatcagtagcatccga
gagatcggcgtacttggcgaggaaagtgaacaaagaaacgatgtatggaggccgtactaa
DBGET
integrated database retrieval system