KEGG   Cyphomyrmex costatus: 108776981
Entry
108776981         CDS       T11118                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03030  DNA replication
ccoa03410  Base excision repair
ccoa03420  Nucleotide excision repair
ccoa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108776981
   03410 Base excision repair
    108776981
   03420 Nucleotide excision repair
    108776981
   03430 Mismatch repair
    108776981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccoa03032]
    108776981
   03036 Chromosome and associated proteins [BR:ccoa03036]
    108776981
   03400 DNA repair and recombination proteins [BR:ccoa03400]
    108776981
DNA replication proteins [BR:ccoa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108776981
  DNA Replication Termination Factors
   ELG1-RFC complex
    108776981
Chromosome and associated proteins [BR:ccoa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108776981
DNA repair and recombination proteins [BR:ccoa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108776981
  Check point factors
   HRAD17(Rad24)-RFC complex
    108776981
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 RCF1-5-like_lid AAA_16 Viral_helicase1 Rad17 AAA_24 AAA_11 Mg_chelatase nSTAND3 RuvB_N AAA_18 AAA_assoc_2 AAA_19 ResIII MeaB MipZ NTPase_1 ABC_tran AAA_28 RNA_helicase AAA_7 AAA_5 MCM AAA_3 IstB_IS21 AAA_25 DNAX_ATPase_lid ATPase_2 SRP54 AAA_30 AAA_2 bpMoxR FtsK_SpoIIIE CbiA
Other DBs
NCBI-GeneID: 108776981
NCBI-ProteinID: XP_018399257
UniProt: A0A195CFP7
LinkDB
Position
Unknown
AA seq 353 aa
MADDIIINEDEPMETEILPSTSKGNVKVKEKDSKSANLPWIEKYRPQVFSDIVGNEDTVS
RLSVFAQHGNTPNIIIAGPPGVGKTTTILCLARTLLGSAFKEAVLELNASNERGIDVVRN
KIKMFAQKKVNLPKGKHKIIILDEADSMTDGAQQALRRTMEIYSHTTRFALACNNTEEII
EPIQSRCAMLRYGKLTDAEVLAKVLEVCEKENISYTDDGMEAIIFTAQGDMRQALNNLQS
TYNGFNHVNAENVFKVCDEPHPLIVKDMLDDCTKGDVSKACSVMDHFWKMGYSAEDIVSN
VFKVCKTHTMDERLKLKFVKEIGITHMGIVEGINSLLQLHALVARLCRACTSK
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggcagatgacattattatcaatgaagatgaacccatggaaactgagattttaccgtcc
acgagcaagggtaacgtgaaagttaaggagaaagatagtaaatctgcaaatttaccatgg
attgagaaatatcggcctcaagtcttttctgatattgttggcaatgaggatactgtatct
agattatcagtctttgctcagcatggaaatactccaaatattatcatcgctggcccacct
ggagtgggcaaaactaccacaattttatgtttggctcgtaccttattaggatcagcattc
aaagaagctgtacttgaattaaatgcttcaaatgagagaggaatagatgtagttagaaat
aaaattaaaatgtttgctcagaaaaaggtgaatcttccaaaaggaaagcataaaatcatt
attttagatgaggcggacagtatgactgatggcgctcaacaagcattacgccgaacaatg
gaaatttacagccacacaactagatttgcacttgcatgcaacaatacggaggaaattatc
gaacctatacaatcacgatgtgctatgttaagatatggaaagttaacggatgctgaagtc
ttagccaaagttcttgaagtctgcgaaaaagagaatatttcttatacagatgatggcatg
gaagcgataatatttacagctcaaggagacatgagacaagctctaaataatctgcaatct
acatacaatggatttaatcacgtaaatgcagaaaatgtatttaaagtctgtgatgagcct
catcctttaattgtcaaagatatgctggatgattgcacaaagggagatgtttctaaagca
tgttcggtaatggatcatttctggaaaatgggttattctgcggaagacatagtcagtaac
gtatttaaagtttgcaaaactcatactatggatgaaagactaaaattgaaatttgttaag
gaaattggaataacacatatgggaatagtagaaggtattaacagtttattacaattacac
gctctggtggcaagactttgccgcgcatgtacatcgaaataa

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