Cyphomyrmex costatus: 108776981
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Entry
108776981 CDS
T11118
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03030
DNA replication
ccoa03410
Base excision repair
ccoa03420
Nucleotide excision repair
ccoa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108776981
03410 Base excision repair
108776981
03420 Nucleotide excision repair
108776981
03430 Mismatch repair
108776981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccoa03032
]
108776981
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108776981
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108776981
DNA replication proteins [BR:
ccoa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108776981
DNA Replication Termination Factors
ELG1-RFC complex
108776981
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108776981
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108776981
Check point factors
HRAD17(Rad24)-RFC complex
108776981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
RCF1-5-like_lid
AAA_16
Viral_helicase1
Rad17
AAA_24
AAA_11
Mg_chelatase
nSTAND3
RuvB_N
AAA_18
AAA_assoc_2
AAA_19
ResIII
MeaB
MipZ
NTPase_1
ABC_tran
AAA_28
RNA_helicase
AAA_7
AAA_5
MCM
AAA_3
IstB_IS21
AAA_25
DNAX_ATPase_lid
ATPase_2
SRP54
AAA_30
AAA_2
bpMoxR
FtsK_SpoIIIE
CbiA
Motif
Other DBs
NCBI-GeneID:
108776981
NCBI-ProteinID:
XP_018399257
UniProt:
A0A195CFP7
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MADDIIINEDEPMETEILPSTSKGNVKVKEKDSKSANLPWIEKYRPQVFSDIVGNEDTVS
RLSVFAQHGNTPNIIIAGPPGVGKTTTILCLARTLLGSAFKEAVLELNASNERGIDVVRN
KIKMFAQKKVNLPKGKHKIIILDEADSMTDGAQQALRRTMEIYSHTTRFALACNNTEEII
EPIQSRCAMLRYGKLTDAEVLAKVLEVCEKENISYTDDGMEAIIFTAQGDMRQALNNLQS
TYNGFNHVNAENVFKVCDEPHPLIVKDMLDDCTKGDVSKACSVMDHFWKMGYSAEDIVSN
VFKVCKTHTMDERLKLKFVKEIGITHMGIVEGINSLLQLHALVARLCRACTSK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacattattatcaatgaagatgaacccatggaaactgagattttaccgtcc
acgagcaagggtaacgtgaaagttaaggagaaagatagtaaatctgcaaatttaccatgg
attgagaaatatcggcctcaagtcttttctgatattgttggcaatgaggatactgtatct
agattatcagtctttgctcagcatggaaatactccaaatattatcatcgctggcccacct
ggagtgggcaaaactaccacaattttatgtttggctcgtaccttattaggatcagcattc
aaagaagctgtacttgaattaaatgcttcaaatgagagaggaatagatgtagttagaaat
aaaattaaaatgtttgctcagaaaaaggtgaatcttccaaaaggaaagcataaaatcatt
attttagatgaggcggacagtatgactgatggcgctcaacaagcattacgccgaacaatg
gaaatttacagccacacaactagatttgcacttgcatgcaacaatacggaggaaattatc
gaacctatacaatcacgatgtgctatgttaagatatggaaagttaacggatgctgaagtc
ttagccaaagttcttgaagtctgcgaaaaagagaatatttcttatacagatgatggcatg
gaagcgataatatttacagctcaaggagacatgagacaagctctaaataatctgcaatct
acatacaatggatttaatcacgtaaatgcagaaaatgtatttaaagtctgtgatgagcct
catcctttaattgtcaaagatatgctggatgattgcacaaagggagatgtttctaaagca
tgttcggtaatggatcatttctggaaaatgggttattctgcggaagacatagtcagtaac
gtatttaaagtttgcaaaactcatactatggatgaaagactaaaattgaaatttgttaag
gaaattggaataacacatatgggaatagtagaaggtattaacagtttattacaattacac
gctctggtggcaagactttgccgcgcatgtacatcgaaataa
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integrated database retrieval system