Cyphomyrmex costatus: 108776994
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Entry
108776994 CDS
T11118
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108776994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccoa04121
]
108776994
Enzymes [BR:
ccoa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
108776994
Ubiquitin system [BR:
ccoa04121
]
Ubiquitin ligases (E3)
HECT type E3
108776994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
108776994
NCBI-ProteinID:
XP_018399270
LinkDB
All DBs
Position
Unknown
AA seq
2074 aa
AA seq
DB search
MADQQDQLSSGGSVEKASASADTSKSRGKSSSSGSSSYRKRQSTGAIPDSVEEKRRRQTN
SDPQTSHVDSNTPHTHSIDSSKGEGRIRGERRSHGAGLESYSETDWRSHHKIHQVSYSSS
SSTRVRSAARSLPESSLTPTDCVASRTRSRTPQNPQALIQGTSSYDLSLPSGYGSRKTST
YSSLVASSSATSITSHPSTSRGRGGQRMSECLEGFVSAVKALFPISTQTYHQEDSKSHGS
ATCSATSSSTSSQVLGVKSSIRVGNAASNSVESGGGALAHDGAGTSGIASTATANPPVSA
TVSANPTHPHSTHKHLLRSRAKATGEQSKELPSSNKTSGKHHKKDTTTGSCSSSRHRSSS
RVRKPVVESGSGGLGSVMSGNDSISATSVSSSIPSSQLVSTTGEEESASTATSATAGGGP
SGMSGTTGDSESDDGEVGRLQALLEARGLPPHVFGALGPRMQHLLNRSMGASSAAKAQQL
LAGLQAVEDEGEQLQAVMNMGEILVMGNEDTLTGFPVKQVVAALINLLGIEHNFAIMTHA
CRALTYMMEALPRSSTVVVDAVPVFLQKLESIECMDVAEQCLTALAMLSRRHSKTILHAG
GVSACLKFVDFFNITAQRAALTITANCCQNLNPDDFHLVVDSLPLLTSRLTNQDKKSVEC
VCQAFSRLVDSFQHDPVMLHKIINAELLQNLQQLLMITPPVNSTNNFITVLRMLSVISNR
CPDLAQLLLQQNIAFTLSYLLTGSLEVKTEDVELVPRTPQEWFEITCLIEELMPPLPTDG
IFSVNSLLERTSNQQETVQWEWRDERQCSHPFSTIDSRIIEMAFQNGEDEICLTSLGRTY
TIDLTVMKQINEDIGMTRSIFRRVNANPTEGKSPTCSSSMDVVPPVIETNEWLVSFIRTL
FSVLYEVYSSSAGPAVKCKCLRALLRMVYYASTDLLKDVLKNQVVSSHIAGMLASQDLRI
VIGALQMASILMKRLPQVFGVHFHREGVLHQVRQLADPEVPLGVSPPKCPSGTSLPSPQP
GPSNTPLSSTTMLSSSSATSPVVSPSSNGNILFGTIASSCQYKPNISASLEPHRTELNNS
VEETSAPQSAHLRIGDVLKKKRQNKKGRFSRLGGTTTPQQTQQPESLFTGFTPKNNRFLG
NLNPAKWGRKSSSSSTSNDKRDSSSSTNLSKPPSNPSLTGGNRDKAKAWVREQAAQFLAR
YQDDAPCSHPALTVLGRLTAAIHRLQSNELDEMLSALTELRDIVLESDISPFEMNYSGLI
KALLNYLTTTDAPGNRYDRLRMFWKLFAESTMQQNNDIVDLNPGAFGALVTKLNSCVAQL
EQFPVKVHDLPAGSGAGRGGTSALKFFNTHQLKCNLQRHPDCNNLKQWKGGTVKIDPLAL
VQAIERYLMVRGYGRIRDADSMVSDDDNSEDDIDDTLAAVVISQGPPKHKLQFLIGDVVL
PFNMTVYQAVRQFGCSGVDHSEAEADSEPPLGHDAVWVQTHTIYYRPVPEEDVATSPKLG
SSSQGNSRKGKGKSTKISSKRKEDSLWLEGTVPLQHCPLAPYLSPTLPSSVTIMDASLDG
LCLLRLLHALNRHWGILFPHLKSMSLLSPQDFINNKIAAKASRQLQDPLVIMTGNLPSWL
QQIASVCPFLFPFETRQLLLYATSFDRDRALQRLLDSAPELSGSDSQERVTPRLERRKRT
ISRTDILKQAELVIQDLASNKALLEVQYVNEVGTGLGPTLEFYALVSKELQRADLDLWHG
SSNPTENGYVNSSHGLFPTPIPWNTKVSHLAKLKTKFKFLGKFMAKAIYDSRMLDLPFSL
TFYRWLLGEEHTLTLADLAYVCPDVYRTLSKLQDVVRKKEAMEKDQTLRPHEKAQLIEAL
DLDTCPISELGLVFELPGYENIELRKGGSEISVTIYNLDQYIKLVVHWFLYEGVFRQMEA
FREGFESVFPPSQLRLFFPEELEAVFCGHAQTGGQWDVKTLAECCRTDHGYTPDSRAIRF
LFEVMSKYNSEEQRQFIQFVTGSPRLPVGGFKSLTPPLTIVRKTFDPSMKTDDFLPSVMT
CVNYLKLPDYTTLEIMREKLRIAAQEGQHSFHLS
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcaacaagatcagttgtcatcaggggggtctgtagagaaggccagtgcttca
gcagacacctctaagtcaagggggaaaagctctagtagtggctcgagtagctacagaaaa
cgacaaagtactggtgcaatcccagatagcgtggaagagaagaggcgtagacagaccaac
agtgacccgcagacatctcacgttgacagcaatacaccgcacacgcattcgattgattct
tccaaaggagagggcagaatcagaggtgaacgaagaagtcatggagctggcttagaatct
tattcagaaaccgactggaggtctcatcataagattcaccaagtcagctacagcagtagt
agtagtacaagggtgcgtagtgcagcgaggagtctgccagagtcaagtttaacacctacc
gattgtgtggcatcgcgaactcgttcccgtacaccacagaatcctcaagcattgatacag
ggaactagcagttacgatctgtcactgcccagtggatacggtagccggaagacaagtacc
tacagcagtttggtagcttcatcgagtgctacgtcgatcactagtcatccatccacatcg
agaggaagaggaggccagaggatgagcgaatgtctggaaggatttgtgtctgctgtcaaa
gcactttttccaatatcaacacaaacctaccatcaagaagattcgaaatctcacggcagt
gcgacctgtagcgcaacgagtagcagcacgagtagtcaagtcctgggtgttaagtccagc
atcagagtgggtaacgcagcaagtaactctgtggagagtggtgggggggcgttggcacat
gacggggcaggcacgagtggcatcgcttcaacggccactgccaatccacctgtgtctgcc
accgtttctgccaaccctacacaccctcattctacacacaagcacctgctacgctctcgc
gcgaaagctaccggtgaacagtcgaaggaattgccatctagcaacaagacttcggggaaa
catcacaaaaaagacactacaacgggttcctgttcgagttcgagacatcgctcctcatcg
cgcgtgaggaagccggtggtggagagcggctccggtggattaggtagtgtaatgtcaggc
aatgattctatcagcgctacatcggtgtcatcctctattccgagcagtcagttagtctca
accacaggtgaggaggagtcggcatcaactgcgacatccgccacagctggtggaggacca
tctggaatgtcaggaacgacgggtgatagcgagagtgacgatggagaagttggacgactg
caagctttattggaagctagaggtttaccgcctcatgtgttcggtgcactaggaccacga
atgcaacacttacttaacagaagcatgggcgcaagttctgctgctaaggcgcaacaactt
ttagctggcttacaagctgttgaagacgagggagaacaattgcaggccgttatgaacatg
ggagagattcttgtaatgggcaacgaggatactctaaccggttttcccgtcaaacaagtg
gttgcagctttaattaatttattggggattgaacataattttgcgataatgacccatgcg
tgtcgtgcccttacatatatgatggaggcgttgccacggtcatctactgtagtagtggat
gcggtgcctgtattcctacaaaaactcgaatcgattgagtgcatggatgtagctgaacag
tgtttgactgcattagccatgttgtcacgtaggcacagcaaaactattttacatgcgggt
ggggtatcagcctgcttgaaatttgttgatttcttcaatatcacagcacaacgtgcagcg
ttaacaattactgcaaattgctgccaaaaccttaatcctgacgattttcatttggtagtg
gatagtctgccattattaaccagcagattaacgaatcaagataagaagagcgttgagtgt
gtgtgtcaagcattcagtcgattagttgacagtttccaacatgatcctgtaatgctacat
aaaattattaatgctgaacttttacagaatttacaacagctgctcatgattacgccgccg
gttaacagcactaacaatttcataactgtattacgaatgctctctgtgatatcaaatcgc
tgtcccgacttggcgcaattgctgctgcaacaaaatatagctttcacgttaagttatctt
ttaaccggatctttggaagtcaaaacggaagacgtggagttggtgccgcgtacaccacag
gagtggtttgaaattacatgtttaatcgaggagcttatgcctccgttaccaacagatggg
atattcagtgtaaatagtttactcgaaaggaccagcaatcaacaggagactgtccagtgg
gaatggcgtgacgaaagacaatgttcccatccgttcagtactatagattctagaattatc
gagatggcgtttcaaaatggcgaagatgagatatgccttacctctttaggacgaacgtac
actatagatctgactgtgatgaaacaaattaatgaggatataggaatgacaagaagtata
tttcggagagtaaacgccaatcccactgagggaaagagtccaacttgctcatctagtatg
gatgttgtgcctccggtaatcgaaacgaacgaatggttagtgtcttttattcgaacttta
ttctctgtattatatgaggtttatagcagctcagctggacccgctgtaaaatgcaaatgc
cttcgagctcttcttcgaatggtatattatgcttcaactgatttacttaaggatgttcta
aagaatcaagtggtttcgtcacatatagctggtatgttagcgtcgcaagatttacgtata
gttatcggagctcttcaaatggcgagtatcctgatgaagagattaccacaagtatttggg
gttcattttcatcgcgagggcgtactgcatcaagttcgtcaattagcagatcccgaagta
cctctcggtgtttcaccacctaagtgcccttctggtacatcattaccaagcccacagcca
ggtccgtctaatacaccactttcttccaccacaatgttgtcttctagtagtgccacgtct
ccggttgtctctccatcttcgaatggcaacatattgtttggcacaatcgcgtcgtcgtgc
cagtataaaccaaatattagtgcttcactggaaccacacagaacggaattaaacaacagt
gtagaggaaacaagcgcaccgcaaagtgctcacttaaggatcggtgatgtactgaagaaa
aaacgacagaataagaagggtcgtttctcgagattgggaggcaccaccacaccacaacaa
acgcaacagccagagtctctgttcactggttttaccccaaagaacaatcgatttttggga
aatctcaatccggccaaatggggtcggaaatcgtcctcatccagtactagcaacgataag
agagactcgagctcgtccacgaatctgtcgaaaccaccgagtaatccgagcttaactggt
ggaaatcgagataaggcaaaagcatgggtgcgcgaacaagcagcccaatttttggcaaga
tatcaggacgatgcaccttgctcgcatcccgccctaacagttcttggtcgactgactgct
gcaatacatcgattgcaatcaaatgaattggacgaaatgttatcagcattaacggaatta
cgggacatagttctcgagagtgatatatcgccgtttgaaatgaattatagcggccttatc
aaggctctgttgaactacctcactaccacggatgcaccgggtaatcgttacgatcgtctt
cgtatgttttggaaattgtttgcggaatctaccatgcaacagaataacgatatcgtggat
cttaatcctggagcgtttggtgctttagtaacgaaattgaacagttgtgttgcacagcta
gaacaatttccagtgaaagttcacgatttacctgcaggttctggcgctggtcgtggtggc
acgagtgctctgaagttcttcaatacgcatcaacttaagtgtaatcttcaacggcatccg
gactgtaataatctgaagcagtggaagggcggtactgtaaaaatagatccgctcgcatta
gtacaggcgattgagcgttatttgatggtacgtggatatggcagaatacgggacgctgac
tcgatggtcagtgatgacgacaatagcgaggatgacattgatgatactctggcggcagtt
gtgataagtcaaggaccaccgaaacataaacttcagtttttaattggtgacgtggttcta
ccttttaatatgacggtttatcaagctgtcaggcaatttggatgctccggagtggatcac
tcagaggcagaggccgatagtgaaccgccacttggacacgatgcagtatgggtgcaaacc
catacgatatactatagacctgtaccagaagaagatgtcgcaacctctccaaaattaggg
tcgagttcacagggtaatagcagaaagggcaagggaaaaagtacaaagattagttcaaag
agaaaagaagatagtctctggctagaaggcacggttcctcttcaacattgtcccctcgcg
ccatatctatctcccacgttaccatcctcggtaactatcatggacgcctctctcgacggg
ttgtgtcttttgcgactcttgcacgctcttaatcgccattggggtatactgttccctcat
ctgaaaagcatgagtttgctatcacctcaggacttcatcaataataagatcgccgcaaaa
gctagcaggcaactgcaggatccattggtgatcatgactggaaacttgccatcttggtta
caacagatagcgtctgtctgtccttttctctttccatttgagacgaggcaacttttgttg
tatgcaacgtcgtttgatcgagatagagcactacaacgtctcttggattccgcgccggaa
ctctcgggatcggatagtcaggagcgcgttacgccacgcttagaacgaaggaagagaact
atctcgagaacggacattcttaagcaagcagagctcgtgattcaagacttagcctctaat
aaggccttactcgaagtgcaatatgtcaacgaggtcggtactggtctcggtccaactctg
gaattttacgctctagtctctaaggaactgcaacgcgctgatttagacttgtggcatggc
agttcgaatcctactgaaaacggatatgttaattcctctcacgggctctttcccacgcca
atcccatggaatactaaagtatcgcatctagcaaaattgaagaccaagttcaaattcctt
gggaaattcatggcaaaagcaatatacgactccagaatgttggacttgccatttagttta
actttctatcgttggttattgggagaggaacatactctcacattagcagacttggcatac
gtatgtcccgacgtatatcgcactcttagcaagctccaagatgtcgtgaggaagaaagaa
gctatggaaaaggatcagacgttacgaccgcacgagaaagcacaattaattgaggctctc
gatttagatacatgtcccatttctgaattgggtcttgtgttcgaattaccgggctacgag
aatatcgaattgaggaagggcggtagcgaaatatccgttactatttacaatctggatcaa
tatattaagttagtggtacactggttcttatatgaaggagtgttcaggcaaatggaagct
tttcgggaaggtttcgagtctgtattccctccgtcgcaactaagactatttttcccagaa
gaactggaggcggtattttgcggccacgcacaaaccggtgggcaatgggacgtgaaaact
cttgccgagtgttgtaggaccgatcatggttatacaccggactcacgggccattcgtttt
ctattcgaagttatgtccaagtataacagcgaggaacagcgacaattcattcagtttgtc
accggttcaccgcgtttgcccgttggaggtttcaaaagtttaacgcctccgttaacaata
gtgcgtaaaacctttgatccatctatgaaaacagacgattttctaccatcagtaatgact
tgcgttaactacctaaaactgcctgattataccactttggaaataatgcgggaaaagtta
cggatagccgcgcaagagggtcaacattcgttccatctctcctag
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integrated database retrieval system
