Cyphomyrmex costatus: 108777115 Help Entry 108777115         CDS       T11118                                  Name (RefSeq) nucleoprotein TPR isoform X1   KO K09291   nucleoprotein TPR Organism ccoa  Cyphomyrmex costatus Pathway ccoa03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:ccoa00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     108777115  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccoa03019]     108777115 Messenger RNA biogenesis [BR:ccoa03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      108777115 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TPR_MLP1_2 ZapB YabA ATG16 Motif Other DBs NCBI-GeneID:  108777115 NCBI-ProteinID:  XP_018399419 UniProt:  A0A151IE56 LinkDB All DBs Position Unknown AA seq 2359 aa AA seqDB search MEVVEENVHNILLEIANEKELTQIPRELVRKINVYFNNRFEEFITAKAVFETNRKCLEQN LEKAQKEVAEQKLDLEEHKAKLEFTEKSNTEICSNFEEVKIEVHRLQESVKRLEKENGEL RRQRDTATDEASALQLQVERRDTEIERMRIELSSLSSQLQTAIATKCQTLAETEEIRSRE MTLDFKEKRLEQERVLLSQQIAGLEEELARRTSELQTARSEASARALLIDTKLSQREEEL RIANEVNSQLRESVSSLQKQSDELAQKVEQQRAHEIAINDSYQKEINAQKNLTSLYESMK DDANAKAEALSNAASELQKLVDSTAEEYGILETKYNHLLVQHKQDIDDKEQNIQELTKEL ENANELLKNIQQEKLNQAVEQLAPAAAVTSRVLRKGLSLTQIYTQLVEVTNDLNVEREEN ERLKSQMDVILRELEQKAPLLQQQRQDYETAMANITTLTNRLDDLLAENQRLHENSDEAN RLSKHHSTENQRLKTELSDLARQVCYLLKEVQESRTSTRMETGNLSSSIDTDDISSSQII SKKLVTFKDIEELQENNQKLLAIVRALSSRQEEMERATDEINSGEMKEKLDRYMEQLTEM QAAQDRQSKMLDGLLKQKDMYKNMYQQMKNSNEKRKDEVDKDIEEGKLDEELKTTKNDEE KEKLLKKLKETEDQFKHVSDEYEIYRKERTAHEKMLSEEVERLRKEAESNSARCCRLKAQ LDSANDRFSLLQGNVASYKSQIKALEEKCTNYNITISKHEQSIMILKDETLSAQTRLSRA EVQLENIRQERQLLWDTEGRLLKEREVYQRERQTQALLKADMESIKASLERVQAEGQLRA EQRLDDANRECAALRRRLQEEQDRFRELAAHLERQFTIAQERLKEERELSERLRVELDQV RETETQNSQKIDQLNNKLRQAAAHSIAKPLTGDEGLVKRVKELEIQLSTSQVEVNSLSEQ LKAARQQSQQYCDIAESAETQLRELTTECNKHKEELENALKESRVEIISLQKRVKELGDD LVKISNGRQETDSELRDRLAEAERKVEELDELKSELELLKTDLKSASVTVKEAEDKYTRE MLQHSSDLQILSKLKEDTQQVQQRFDVLTVERNAAVQALEAEKLASKQREQKLVNEVEET QKRIIDLDTQNALLHNQIQELGDRVAIMQSQQTIISGRDSPDTSLEALNKSFSSLEEDSK SVEQLLRVMKYLRREKDLSLAKTDVLRAENLRLKSQVEVIEKRLKETETLLNSEREKSEI NVMTTSKHAELLRKVETLNAITDSNRILREERDSLSMKVNELTTKVNSLSEEVVPLRDIS RDLTAKTEALIEENTSLKGEATRWRQRANTLLERANKASPEDWRRLQTERENLSKLLTSE RETHAKRSEEFNQVKIEKAKLEEQLTQLQRQMQTQDEHVSRASEEVRKLGQELNEALADS TSKTKDLASLRKELSDKDVVLNDIRNKEIQIRKIAKKYKTQFEELAKSVEEEKNRNEETR NENASGVTTQEREDQLREEGRQELRQANIELTTKIDEATRQMVVAQSEADNLKKEIEAMN RSSIEKEDRAKQVLKGARTKIMQLTESKKICEKELLDLKSRIESVGGSTGVQGDSDTEHD ARIVALKSQMEGRISRLEHEKSEIQAEKEALLQRVAQLQRQLSGVSGVSATTEPPTANIK PMSARAETPLASIRPMSVVVQSRTAAVLPTTAGAPVMVAPHQMQQQQVVHTTETSSPTSS LTDFQPASTSTSQSAQTSSLRQLVVQPQLSESAESTQREDPESAETLNLQPQQQQCQQQQ QQQQQTVALVSPRVEQQQQQQQITVSDQQQTVASSSTQSVSTSQASTGLKRPRGRDSTAS GSGIVEGLDHGRQEQVQSPKTKRSRQDISATASASASEVEYQVPTSSQRDQDEEVEEGCV VVVDCDEGEGAGNHQTQEEEEFDNDTYEEIEEEEEMPYEVEVEVERDNNEVEIIMEEDST SVEISRQGQAIIPANQQQSEAISSAGPTAEPATSFTAMSSRGIAPMPRQQQQQHLLLPQQ GYEDGGDDCIVPSTPTLFVPRRDGFGEAVSSPQVPQGRFTFGDSSAPTTASSTPSLTTPS GSNTRIFGSTNSTVVQESLDDSRMDLVQLEDGGTGRSVPTTPLQVSPAADLPPSTSSSQS EEQENTVTHVAVTATSGDNSDDPNIPSIHIVGIDDQQRDSTEATESSATPSEGVSSEGEK REEEPVLASGEDDAVDTIEATEETGSELVEEEVEEENREAEASPSSNTRQRTLAASLAAT SDANNGRGMTVRRSPRSPFTPRVARGARPTPIVWGETQSGRGQPVMRGHTARGAANEGGR GRGTRGRRMRSKYPYARYS NT seq 7080 nt NT seq  +upstreamnt  +downstreamnt atggaagtggtcgaggagaacgtgcataacattcttcttgagattgcgaatgagaaagag ctaacacaaatcccgagagagttagtgaggaagatcaatgtatactttaataatagattc gaggaattcattaccgccaaggcggttttcgagacgaaccgaaaatgcttggagcaaaat ttggagaaggcacagaaagaagttgcagaacagaagttggatcttgaagaacataaagca aagttagaattcacggaaaagagcaatacagaaatttgtagcaattttgaggaagtgaaa atagaagtacaccgattacaggaatctgtcaaacgattagagaaggaaaatggtgaatta cgcagacagagagatacagccacagatgaggcaagtgcattgcagttacaagttgaaagg cgagatactgagattgaaagaatgcgtattgaattatcatctttaagcagtcagcttcaa actgcgattgcaaccaagtgtcaaactctggctgagactgaggaaattcgtagtcgagaa atgaccttggacttcaaagagaaacgattggagcaagaacgagtgcttctctcccaacaa atagcaggtctcgaagaagagttagcaaggaggacctctgaacttcagacagcaagatct gaggcctctgccagagctcttttaattgatactaaattatcccagcgtgaagaagaattg cgaatagccaatgaagtcaattctcaactgcgagaatctgtttcttctcttcaaaagcaa tccgatgaactggctcagaaggtggaacagcaacgtgcccacgaaatagcaataaacgat tcctaccaaaaagaaatcaatgcacagaaaaatctaactagcttatacgagtcgatgaag gatgatgccaatgctaaagccgaggcactttctaatgcagcgagcgaattacaaaaactt gtggatagtactgcagaagaatacggaatcttagagacaaagtacaatcacttactggtt cagcacaaacaagatattgatgataaagagcaaaatatccaggaattgacaaaagagtta gaaaatgctaatgaattgctgaaaaatattcaacaagagaaattaaatcaagcggtagaa caattggcaccggcagcagctgtaaccagtcgagtattacgaaaaggtttaagccttaca cagatttatacccaactagttgaagttaccaatgacttaaacgtggagcgtgaagaaaac gaacgtttgaagtctcagatggatgtaattcttcgcgaattggagcaaaaggcgccgtta ctgcagcaacagcgtcaagattatgaaacagctatggcgaatattacgacgctaacaaac aggctggacgatctcctggcagaaaatcaacgtcttcatgaaaattctgatgaggctaat cgtctttccaaacatcactccacagaaaatcagaggctgaaaactgaattgtctgactta gctagacaagtatgttatctgcttaaagaagtccaagaaagtcgcaccagcactcgcatg gaaactggaaatttgtcttcttctatagacacagatgacatctcgtcatcgcaaattatt agtaaaaagttggtgacgtttaaagatatcgaagaactgcaggagaataatcagaagctc ttagcaattgttcgcgcattatcatccagacaagaagaaatggagcgagccaccgatgaa ataaattcaggcgagatgaaggagaaactggatcgttatatggaacaattaacagagatg caggctgcgcaagataggcagtcgaagatgttggacggtctcttaaagcagaaagacatg tacaaaaacatgtaccaacagatgaagaattccaatgaaaagagaaaagatgaagtggac aaagatattgaagaaggcaaattagatgaggagttaaaaacaacaaaaaatgatgaagaa aaagaaaagttactcaagaaattaaaagagactgaagatcagtttaaacatgtttcagat gaatacgagatatatcgcaaagaacgaactgcgcatgaaaagatgttgagcgaagaagtt gaaagacttagaaaagaggcagaatcgaattcggcaaggtgttgcagactgaaagcgcag ttggactcggcgaatgacagattctcacttttgcaaggtaatgtcgcttcatacaagtcc cagatcaaggcacttgaggagaaatgtaccaattataacatcactattagcaaacatgaa caaagtattatgatactgaaagatgagacgctttccgctcaaactcgcttatctcgagct gaagttcaactagaaaatattcgtcaggaacgtcaacttttgtgggatactgagggacgt cttctaaaagaacgggaggtttaccaaagagaaagacaaactcaagcattgcttaaggca gatatggaatctattaaagccagtctggagcgagtccaggctgaaggacagcttagggcc gagcagaggctcgatgacgccaacagggaatgtgctgctcttcgacgtcgtcttcaagaa gaacaggatcgcttcagagaattggcggctcatttagagagacagtttacgattgctcaa gaaagactgaaagaagaacgcgaattaagtgagagattgagagtcgagttggatcaagta agagagactgaaactcaaaatagtcaaaaaattgatcagttaaacaataaattgagacaa gcagctgcccattccatcgctaaacccttgacaggcgatgaaggtcttgtgaagagagta aaggagttggaaatacaactgagtacctctcaggttgaagtaaattcgctctccgaacaa ttaaaggcagctagacaacaaagtcagcagtattgtgacattgcagaaagcgctgaaaca cagttgagagagttgacaaccgaatgtaacaaacacaaagaagagctggagaatgctctt aaagaatcgcgtgtggagatcatttcattacaaaaaagagtgaaagaactaggtgatgat ctggtgaagatatcaaatggtagacaagaaaccgattcggaattaagggatagattggct gaagctgagagaaaagtcgaagaactcgatgagttgaagagtgaattggagttgttaaaa acagatctgaaatctgcctctgtcacggtcaaagaagcagaagacaaatacacgagagaa atgctgcagcattcgtctgatttgcagattttgtcaaaattgaaagaagacactcaacaa gttcaacagcgatttgatgttttgactgtagaacgaaatgctgcagtgcaagctctggaa gctgaaaaattggcctcaaaacagagagaacagaagcttgtgaatgaggtcgaagaaact caaaagagaattatagatctggatacgcagaatgcacttctgcataatcagattcaggaa ttgggtgaccgagtagccatcatgcagagtcagcagacaataattagcggaagagatagt cctgatactagtctggaagctctaaataagagttttagctctttggaggaagattccaaa tcagttgaacaattactgagagtaatgaaatatttaagaagagagaaggatttgtccttg gccaaaaccgatgttcttagagctgaaaatctgagattaaaatcacaagttgaggtaata gagaagcggttgaaggaaactgaaactttactgaattctgaacgagaaaagtccgagatt aatgtaatgaccacatccaaacatgccgaattactgcgcaaggtggagaccttaaacgcc ataacggattctaatcgaatcctcagggaagaaagagatagtcttagtatgaaagtcaac gaacttacaactaaagtgaactctttatcggaagaagtagtacctcttcgagatatatcc agagatttaacagccaaaacagaagctttgatagaagaaaacactagcttgaaaggcgag gcaaccagatggaggcaaagagcaaatacgttattggaaagagcgaataaggccagccct gaagactggcgacgacttcaaactgaaagagagaacttgagcaaattgttgacgtcagag agggaaactcatgcaaagagatctgaggaatttaatcaagtgaaaatagagaaggcaaaa ctcgaggaacaactaacgcaattgcaaagacagatgcaaacccaagatgaacatgtgtcg cgagcatcagaagaagttcgcaaattaggtcaggagcttaacgaggcactagccgattct acatcgaagacaaaggatttggcatcccttagaaaggagctaagcgataaggatgtcgtt cttaatgacattagaaacaaggaaattcagatccgcaaaatagctaaaaagtataaaacg caatttgaggaactcgcgaaaagcgtcgaggaagagaagaatcgcaatgaggaaactaga aacgagaatgcttctggtgtgacaacacaagaacgtgaagatcaactgcgagaggaagga cgccaggagcttcgccaagcgaacatcgagctcacgacaaagatagatgaagcaactcgc caaatggtagtggctcaaagtgaagctgataatctgaaaaaggaaatcgaggccatgaat cgcagcagcatagaaaaagaagacagggcgaaacaggtgctgaagggtgcaagaacgaag attatgcaattgacagagtccaagaagatctgcgagaaagaattattggatttaaaatcc aggatagaatctgtgggaggcagtaccggagttcaaggagattctgatacagagcacgat gcacgaatagtggcactgaaatcgcaaatggaaggtcggatatctagattggagcacgag aaatccgagatacaggcagaaaaggaagcacttttgcagcgggttgctcaacttcaaaga cagttatcgggagtaagcggggtaagtgcgactacggagccaccaacagcgaacattaaa ccgatgtctgccagagcagaaacaccattggccagcattaggccaatgagtgtggtggtg cagtcgcggacagctgccgtcttaccaactacagctggtgcgccggttatggttgcaccg catcaaatgcagcaacaacaggtagtgcatactaccgagacgagctcaccgactagcagt ctgaccgacttccaaccggcaagtactagtacttcacaaagtgcacaaaccagtagtctt cgtcagttggtggtacaaccgcaattaagtgaatcggcggaatcgacacagagagaagac ccagaaagtgcggaaacacttaatttgcaaccgcaacagcaacaatgccagcagcagcag caacaacagcaacaaacagtagcactagtgagtcccagagtggaacagcagcaacaacag caacagattactgtcagtgatcagcaacaaacagtggcgagcagctccacgcaatcggtc agtacttctcaagcttctacgggacttaaaagacctcgaggccgagattcaactgcttct ggttctgggatagttgaaggattggaccatggccgtcaagagcaagtgcaaagtccaaaa actaagaggagcagacaagatatcagtgcaactgcgagtgccagcgcttcggaagtggaa tatcaggtacccacgtcaagtcagagagatcaagatgaagaagtagaagaaggatgtgta gtagtggtggactgtgatgaaggtgaaggtgcaggcaatcatcaaacacaggaagaggaa gaatttgacaatgatacgtatgaagagatagaggaagaagaagaaatgccttatgaagtc gaagttgaggttgaacgagataataatgaagtggaaattattatggaggaggattccacc agtgttgaaatttctagacaaggtcaagccattattcctgcaaatcagcaacaatctgaa gccataagtagcgctggaccaaccgctgaacccgccacgtctttcacagccatgtcctct agaggaattgcacccatgcctagacaacagcaacaacaacaccttcttttgccacaacaa ggctacgaagatggcggtgacgactgtatagtaccaagtactcctactctcttcgttccg cgtcgcgacggttttggtgaagctgtgagttctccacaggtgccgcaagggcgtttcact tttggagactcttcggcacctacgactgcttcctcaacaccgtctttgacaacaccttca ggttcaaatactaggatttttggttcaaccaattccactgttgttcaggaaagtttggat gatagtagaatggacctagtacagctggaggatggcggaactggtcgcagtgtccccacg acacctctgcaggtttccccagctgcagatttacctccttcgactagtagcagccaatct gaagaacaagagaacactgttacacatgttgctgtaacagccacttctggagataatagt gacgatcctaatattcccagcatacatattgttggtattgatgatcaacaacgagattca actgaagctacagaatctagcgcaactccaagtgaaggagtaagttcggagggtgaaaag cgagaggaagaaccagttttagcgtctggagaggatgatgctgtagatacgatcgaagca acagaagagacaggaagcgaactcgttgaagaagaagtcgaggaagagaatcgggaagca gaagcatcgccgtctagtaatacacgacaaagaacattggcagcaagtctggcggctacg agtgacgccaataatggtagaggaatgacagtaaggagatcaccgagatcacccttcacg ccgagggtggcaagaggtgcgaggcctacaccgatcgtgtggggagaaactcagtcgggt agaggacaacctgtgatgcgaggacatacggctagaggggctgccaatgagggaggacga ggacgagggacacgtggccgacgaatgcgttcgaaatatccttatgcccgatactcgtaa

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