Cyphomyrmex costatus: 108777129
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Entry
108777129 CDS
T11118
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108777129
Membrane trafficking [BR:
ccoa04131
]
Protein recycling
Others
EARP complex
108777129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
DcpS_C
RLMM_N
DUF6572
Motif
Other DBs
NCBI-GeneID:
108777129
NCBI-ProteinID:
XP_018399438
LinkDB
All DBs
Position
Unknown
AA seq
940 aa
AA seq
DB search
MQSDIMEDLKIKFFGLINKQNAAKVPLMGLNPDLLNPPDLQKCEDLCSEADQSTESEPIP
DQEVLDSIEDVYFNIDSSFDSSRYELNKLPVILKPKEIEKCYKKLKQQHQVVSKKVLQLI
LQKQSACKAEFDKILLLQDQLEAVLEICNIGRADLQLAEKQFTKASLGILANYRGRQVIQ
ELLNSLNTIKTLQCTGDRLQELLNEGNYPGAISLLLECQSAAQTYKHFHCIAELNTNLQN
ILEQAERTLDNTLSKMCSEFDVAVYSSIQEAYTLLGKTQSAMDQLHMHFTAAIHNTAFAV
IHRYAGGDVKRQYKQLCQAVPRETCIACLTELCRSLWTILNSYHLIVNWHNVQEDKAECK
SDTKDLEATLSKQYVKHKLENGIVRVWHDVEMKISIYLMNTNLTNTKFEQFVQVLGIVNR
LMEIGEDLCGFKSENLQESIKKQSLSYFSDYHASRLDELKMFLENDGWELCPVKSNFMAT
QLLEFRSLKPSLNNCKTWNSLDSSTLSDSDNSTGVDLQKYLEGGLSPFTIGLDDTMDEDI
LVNDDIEQPAYFSDDSDEDIPDELKHEYVDEPDYTKINKKKCKLKQSGPMVTNTTLSILR
VCGKYLQMSKLLRSIAVTVIQSMIQFFELCFYTVHLFFTSDLQINSDSLYSPKLKLSLAR
IRETLIISENDTMEENGNANYDKVRQPQLSSIVNLSQPEKLHGLTERIVAVESLIFLGQQ
YEGLKPYLEHLIANSPQRGFLHQFYMQTIASAVDLRKPVYMAVISQVFDVANILNLMNKV
NWEVTDVMSQHSNYIDALIQEVCTLNERLNTIETYISLNTDICSVVWENVAHLITHTLVE
GFSNAKKCSNGGRALMQLDFTQLKSKFEKVTTLRPMPHREYVELYIKAYYLPENSFEEWI
KEHKEYSVKHLVGLISATCQNNKKTRQRLIALVEEQRPNR
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccgacatcatggaggatttaaagattaaatttttcggcctcattaataaacag
aatgcagccaaagtaccacttatgggattaaatccagatctacttaatccacctgactta
caaaaatgtgaagatctctgctctgaggctgatcaatcaacagaaagtgagcctatacct
gatcaggaagtgttagactctatcgaagatgtttacttcaatatcgatagcagttttgat
tcatcacgttacgaactaaacaaactgccagtgatattgaagcctaaggaaattgagaaa
tgttataagaaactcaaacagcaacatcaagttgtctccaagaaagtgttgcaacttatt
ttgcaaaagcagagtgcctgtaaagcagaatttgacaagattttactgctacaggatcaa
ctggaggctgttttagaaatatgtaatataggaagggcagatctgcaattagctgagaaa
caatttaccaaagcaagtttaggcatattagctaactatcgtggacgacaagtaatccaa
gaactgttaaatagtttaaataccataaagaccctgcaatgtacgggagatcgtctgcag
gagcttctaaatgaagggaattatcctggagccatatcgcttcttttggaatgtcagagt
gccgctcagacttacaaacatttccattgtatcgctgaactgaacacgaatttgcaaaat
attttagagcaagcggaaagaactttagacaatactctctctaaaatgtgcagcgaattc
gatgtcgcagtgtattcttccattcaggaagcatatacattgttaggaaagactcaatct
gccatggatcaattgcatatgcatttcactgctgccattcataacacggcgtttgccgtt
atccatcgctacgcgggaggtgatgtaaaaagacaatataaacaactgtgtcaggctgtg
cctcgtgagacatgtatagcttgtctcacggaactgtgcagatcattgtggacaatactg
aattcgtaccatttaattgtaaattggcataatgtacaagaggataaagccgagtgtaaa
tccgatactaaggatttagaagcgactttaagtaagcaatacgtcaaacacaaattagag
aacggtattgtccgagtatggcacgatgtggaaatgaagatatcgatttatttgatgaac
acaaatttaacaaatacaaagtttgaacaatttgttcaggtattgggtatagttaacagg
ttgatggaaattggagaagatctctgtggtttcaagtcggagaatttgcaggagtctatt
aaaaaacagtctttatcttacttttctgattatcacgcatctcgtttggatgaattgaaa
atgtttctggaaaatgacggttgggaattgtgtcctgtgaaatccaatttcatggctact
caattattggagtttcgaagtctgaaaccttcgctcaataactgtaaaacgtggaatagt
ctagatagctcaaccttaagcgatagtgataattctacaggagttgacttacaaaaatat
ctggaaggcggtttgtcaccattcacaataggattggatgataccatggatgaagatatt
ttagtaaacgatgatattgaacaacctgcgtatttttcggacgactcggacgaggatatt
cccgatgaattaaagcatgagtatgtcgacgaaccggattacacaaaaattaataaaaag
aagtgcaaactcaaacaatctggacctatggttacaaatacgacgttaagcatactgaga
gtgtgcggcaagtatctacagatgtcgaagcttttacgatcgatcgcggttactgtcata
cagagcatgatacaattttttgagctatgcttctacacagtacacttattttttacgtcg
gatctccaaatcaatagcgactcgttgtacagtccaaaattaaaattatccttagctcga
attagagaaacattgattatctctgagaatgatacaatggaagaaaatggcaatgcaaat
tatgataaagtaagacaaccacagctttcatccattgtgaacttgtcacaacccgagaaa
cttcacggattaacggaacgtattgtagctgttgagtctctgatatttctaggacaacag
tacgaaggtttaaaaccttacttagagcatctcattgctaacagtccacagagaggattt
ttacatcagttttatatgcagacgatagcgtctgccgtagacttaagaaagccagtctat
atggcagtaatatcacaagtgtttgacgttgcaaatattttaaatttaatgaacaaagtt
aattgggaagtgacggacgtcatgtctcaacacagtaattacattgatgcactaatccaa
gaagtatgcactttaaatgagagacttaacactattgaaacgtacatatctttaaatacg
gatatttgcagtgtagtatgggaaaatgtggctcacttaattacacatactttagtagaa
ggattttccaacgctaaaaaatgttcgaatggtggtagagctttaatgcaactcgatttc
acacagctaaagtcaaaatttgaaaaagtgacaacgttgagacctatgccacatagggaa
tacgttgaattgtacatcaaagcctattatcttcctgaaaatagttttgaagaatggatt
aaagagcacaaggaatattcagttaaacatttagtcggtctgatttcggcgacgtgtcaa
aataataagaaaacgcggcaacgattaatagcacttgtggaagaacagcgacccaataga
tag
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