Cyphomyrmex costatus: 108777228
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Entry
108777228 CDS
T11118
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 27C
KO
K14411
RNA-binding protein Musashi
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108777228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108777228
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108777228
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
108777228
NCBI-ProteinID:
XP_018399563
LinkDB
All DBs
Position
Unknown
AA seq
434 aa
AA seq
DB search
MRVKTEMDDDEKGKLFVGGLSWETTQENLQRYFGRYGEVIDCVVMKNSESGRSRGFGFVT
FSDPANVSLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLR
SYFTRFGKVMEVVIMYDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQVEIKRAEP
RDSSSKMNDSHQGQWGPPQQGGPPMGMAGNMGPMGGPNGQMGGPMMGGPMGPPGNMMQQY
QGWGTSPQTGGYAGYSTQYNAQGWGAPPGPPQQQQIPPPPPHQWGSSYNVQPAAATQGYG
SYGGPAAAASGGYGPTAGTGGAAGGGPGGSWSSWNMPQNGPPPGTQPPPQPPQPNSSQPN
SNSNPSGPQGDMYSRQNTGSGAPGSSSSSAKTPDYTGYSAYSNYADTSYPQRSYQGGENS
QGGVRYMPSRGSPA
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgaagaccgaaatggatgacgacgaaaagggaaaattgttcgttggtgggtta
tcatgggagacaacccaagaaaatctccaacgttactttggtcgctatggcgaggtcatt
gattgcgttgttatgaaaaacagcgaatctgggcgcagtcgtggatttggatttgtaaca
tttagtgatcctgctaatgtttctttggtccttcagaatgggcctcatcaacttgatgga
cgtacaattgatccaaaaccatgtaatccacgtactcttcaaaagccaaagcgtagtggt
ggcttcccgaaagtctttcttggtggtttgccaagtaatgttacggagactgatttaaga
tcttattttactcgctttggtaaagtcatggaagtggtcataatgtatgatcaggagaag
aaaaaatcaagaggattcggctttctcagctttgaggatgaagaagcagtggaccgttgt
gttgcagaacattttgtcaatctgaatggaaagcaggttgagattaaaagagccgaaccg
cgggattcatcgagcaaaatgaatgatagtcatcagggtcaatggggcccacctcaacaa
ggtggcccgccgatgggaatggccggaaatatggggcctatgggtggaccaaacggtcag
atgggtggacccatgatgggtggacccatgggtccgcctggtaatatgatgcagcaatat
cagggttggggtaccagtcctcaaaccggtggatatgcgggatacagcacccagtataat
gctcaaggttggggcgcgccaccaggaccgccacagcagcagcaaatcccgccgccgcca
ccgcatcaatggggtagtagctataatgttcaacctgctgcagctacccaaggttatgga
agttatggtgggccggcggcggccgcttcagggggctacgggcccacggcgggtactggc
ggggctgcgggaggcgggcctgggggctcttggagctcctggaacatgccacagaatggg
cctcctcctgggacccagcccccaccccagccccctcagcctaactcctcgcagcccaac
tccaactcgaacccctctggcccgcagggtgatatgtattcgcggcaaaatacgggttca
ggtgcgccaggatctagcagcagttcagccaagactccagattacactggatattctgca
tacagtaattatgctgatacttcttatcctcagcgttcgtatcaaggaggcgaaaacagt
caaggaggggtacgctacatgccgagtaggggaagtcccgcgtaa
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