Cyphomyrmex costatus: 108777324
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Entry
108777324 CDS
T11118
Name
(RefSeq) CLIP-associating protein 1-A isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108777324
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccoa04812
]
108777324
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
108777324
Cytoskeleton proteins [BR:
ccoa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
108777324
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_2
HEAT_EZ
Cnd1
Vac14_Fab1_bd
TOR1L1_N
Adaptin_N
MMS19_C
INTS1_R4
Arm
HEAT_GCN1
ECM29_N
PDS5
Sec7-like_HUS
Sec6
Motif
Other DBs
NCBI-GeneID:
108777324
NCBI-ProteinID:
XP_018399670
LinkDB
All DBs
Position
Unknown
AA seq
1452 aa
AA seq
DB search
MAVNPRDMDGFMPLLSTTDIKKKLNVGTALLNFLGDLSKSIECQDIGMFIDNIIPWLGNG
NPKVVQNGLEILTYLADRMGHDFKPYISTIIQPTIDRLGDSKDATREKAQLVLLKIMEKG
CMSPQNLLDRLRPAFNHKNAKLREEALILLTTTLNEHGADEMALSGVIPSIVKLLSDPSE
KVRETALNTLADIYRHVGERLRVDLQRKHNVPQAKMLLLIEKFDQLKAAGDLLPLAMSSD
VGKDTDELDRAAIKSAPVKRFNMPPKRGQFGPAKTPSSALAQAGAVDEECFITSFEDVPT
VNLFSAKDLEEQMKSIRDTVGDDKKDWKQRMDSMRKLRAIILAGGTNYENFHECLKSVQR
PFEQACTDLRSQVAREACITLAFLSQSLKTKFASFGEAVLLTLMNLIQNSAKVVATAGAV
AVRFILQNTHCTRYVPIIVSCVSNKSRDIRRASWEYLALILQTWPTQILQKHITILPDAL
KKGIADSDAEARVFARKSYWAFKNHFPEQAEILLNNLDATYKRSLMSLSNSGSSNSLNVM
ANMRSSSVSPRTARPVMSAAGSTENLHQTTGQPHGPLRRTPSLPRSYRQSGIPILQRPTD
SHYRGTPGVRSTSAIDLQAAQRAKARIMYANMSRQKAAAALPRPTKSPDPNAIASPERVA
RTRTRVAGVSQSQPSSRSGSPSSRLSYATYNREGESLIGRPRRLSGHTIGSTSNSREPSP
QRFGSKLRGRNLHMSPTDSTRPPVMAQKMLQKSREAESALADALTFDSIDNYTRIPGNKG
DHSDDSENSSICSERSIDGFRRASDSFSWSGSQSRLYRDLWDQSIPKDIKEIIENCAHKH
WGDRKEGLVGLQHYLSNGKTLTTTDLRRVTDIFTKMFMDSHTKVFSLFLDTLNELLITHN
EGLGDWLYVLCARLLNKLGTDLLGSIQTKIHKTLDVVRDCFPGQQLLPAVMRYLTDPTQT
PNSRVKVAALTFITQIAETAEPSALGSSAATALARLLDWSNDGKSHDVRRHAQNAVISLY
NLNPPQVTMILSELPKYYQETAWPLLENHLRKSSTSSTPASPGTPPPRSQNSPARTKAKN
DIKTDKTEIDGGDENLEEVYKSLRRTTAEIQNYGFERLERATTSKDSGISNMADVEERME
GLTLSNSGRSSSVSSPTQRGRSVSNITVNGSDTIAGDLILPQENNGYKTHGSSPDSTNRP
EIVDNMVKTLQSKVAQTTEKVSALQEFQLYVREGDSSYIKRNFKKVLKVLLDSLSNDGKV
VQVEVLQTLIDMLKCSELIESFSSYNELLILKVIYAYKADDQKVDSSSSSGGRSPVHWNA
EKCAATMAMVLKPEQIIHLVSTIIATESYPLNMGAIKMLHKVVEHWGRDAIEPHLAKVMP
GLIKAYDDNESAVRKSAVFCMVAIHVAVGEEALKPHLSCLYSSKLKLLNIYIQRAQQQAN
SQPASPRSNSKN
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaatccgcgtgatatggacggcttcatgccgctcctgtcaacgacggatatc
aagaagaagctcaacgtcggcaccgcgctgctcaatttcctcggcgacttgagcaagagc
atcgagtgccaggacatcggcatgtttatcgacaatattataccctggctcggcaacggc
aatcccaaggttgtccagaatggtttagagatcctcacgtatctcgcggatcggatgggt
cacgacttcaaaccttacatctccaccatcatccagccgacgatagacaggctaggtgac
agtaaagatgctaccagggagaaggcacaattggtgctcctgaaaattatggagaaggga
tgcatgtcgcctcagaatcttctggatagacttcgtccagccttcaatcataagaatgca
aaattacgagaggaggctctgattctattgacgactacgctgaacgaacatggagcagat
gagatggcactgtcgggggtaattccgagcatcgtaaagctactgtcagatccgtccgaa
aaggttcgggaaactgctctaaacacgctagcggacatctatcgacacgtaggcgagaga
ttacgcgtcgatttgcaaagaaaacacaatgtgccgcaagccaaaatgcttctgctaata
gagaagttcgatcaactgaaggccgctggtgatcttttacccttggcaatgtcgtccgac
gttggcaaagataccgacgaacttgatagagcagcgatcaaatcggctcccgtcaaaagg
tttaacatgcctccgaaaagaggtcaatttgggcctgctaaaacaccatcctctgcctta
gcgcaagccggagctgttgatgaagaatgctttattacttcattcgaggacgtacctacc
gtcaatctattctcagcgaaagatctcgaagaacagatgaagagtatcagggatactgtg
ggtgacgataaaaaggactggaaacaaagaatggatagcatgagaaagttaagagccatt
atactcgcaggtggcactaattacgaaaatttccacgagtgcctaaagagcgtacagcgt
ccgtttgaacaggcctgcactgaccttagatcccaagtagcgcgagaagcatgtataact
ctcgcttttctgagtcagagcctgaagaccaaatttgccagttttggtgaggcggttttg
ctcacgttaatgaacctcatacagaacagtgccaaggtcgtagcgacagccggagcggtg
gcagttcggtttatccttcaaaatacccactgtactcgatatgtgcctattattgtatca
tgcgtaagcaacaagagcagagatattcgtagggcgtcttgggaatatctggctttaatc
ctgcagacctggcctacgcagatattgcagaaacacataacaatattgccggatgcactt
aaaaagggcatcgcggattccgacgcagaagcacgagtcttcgctaggaaatcatactgg
gcatttaaaaatcactttccagagcaggctgagatactacttaataacttggatgcgacg
tataaacgctccttgatgtctcttagcaatagtggtagtagtaacagcttaaatgtcatg
gctaatatgagatcgtcgagcgttagtccacgtacagccagacccgtgatgagcgcggca
ggtagtacggaaaatttgcatcagaccacgggtcaaccgcacggtccgctcagacgtact
ccgtccttgcctcgatcttatcgtcaatctggtatcccgatactacaaagaccaacagac
agtcactatcgaggtacaccaggagttagatctaccagcgcgattgatttgcaagctgct
caaagggcgaaagcgagaataatgtacgcgaatatgagcagacagaaggcagcagcagca
cttcctcgacctactaaatcccctgatcccaatgcgattgctagcccagaaagagtcgca
aggacaaggacaagagtggcgggagtttcacaatctcaacctagcagtagatcaggttcc
ccgtcgtctagattaagttacgctacatacaatcgcgaaggtgaatcactaataggcaga
ccaagacgattatccggacatactattggcagtacaagcaacagtcgtgagccgagtccg
cagagatttggaagcaaactaagagggaggaatctacacatgtcgccaacggacagcact
aggccaccagtgatggcgcaaaagatgctgcagaagtcacgtgaagcagagtctgcattg
gcggatgctttaactttcgacagtattgataattacaccagaataccaggcaacaaaggg
gatcacagcgacgatagtgaaaacagcagtatatgttcagaaagaagtatagacggtttt
agacgagctagtgattcgttctcatggagtggctctcaatcgagattataccgtgatcta
tgggatcagtctatcccaaaggacatcaaagaaattattgaaaactgtgctcataaacat
tggggagatagaaaagaaggtttagtgggcttacaacattatttgagcaacggaaaaact
ttaacaacaacagatttgcgtagagtgacggatatttttacgaaaatgtttatggattct
cataccaaggtatttagtttgttcttggacacattgaacgaactcctgattactcacaac
gaaggtcttggcgattggttatatgttttatgtgcgaggcttctcaataagttaggcacc
gatctattgggatccatacaaacaaagattcacaaaacacttgatgttgtgagagattgt
ttcccgggccaacagcttctaccagctgtgatgaggtatctgacagatccaacacaaaca
ccaaattctcgcgtgaaagtagcagcattgacttttatcacgcagatcgctgagacggca
gaaccgtccgcgctgggcagttctgcagcgacagcacttgcacggttgctcgattggtcg
aatgacggcaaaagtcacgacgtgaggagacatgcgcaaaatgctgtgatatcgctttac
aatcttaatccacctcaagttactatgatactctccgaattaccaaaatactatcaagaa
acagcctggcctctactggagaaccatttaaggaaatcttccacttctagtactccggca
tcacctggtacaccaccgcctagatcacagaattcacccgctcgaacgaaagcgaaaaac
gatattaaaacggacaagactgaaatcgatggaggagatgagaacttggaagaagtatat
aaatctctacgacgcacgactgccgaaatccaaaattacggcttcgaacgtttagagagg
gctaccactagcaaagatagtggtattagtaatatggcagatgtggaagagagaatggaa
ggtttgacgttatccaattcgggtcgatcctcgtccgtttcctcaccgacgcaacgagga
cggtctgttagtaacataacggtaaatggatccgatacaattgccggtgatttgattcta
cctcaagagaacaatggttataaaacgcacggttcatcaccagattcaacaaatagaccg
gaaatcgtggataacatggttaaaactttgcaatctaaagtagcgcaaactacggaaaaa
gtatcggcgttgcaagaatttcaactgtacgtccgcgaaggcgattcgtcatatatcaaa
cgaaatttcaaaaaagtgctcaaagttttattagacagcttatccaatgatggcaaagtg
gtacaagtagaagtgctacaaacattgatcgatatgcttaaatgttccgaattaatagaa
agcttttcctcttacaatgagttactaatattgaaagttatctatgcctacaaggcagat
gatcaaaaggtcgattcttccagcagtagtggtggcagatctccagttcattggaatgcg
gaaaaatgcgcggcgacgatggccatggttttaaaaccggaacaaattattcatttagtc
tccactataattgctacagagtcatatccattgaatatgggcgcgataaagatgttgcac
aaggtagtggaacattggggtcgagatgctattgaacctcatcttgccaaagttatgcct
ggtcttattaaggcttacgatgataatgaaagcgcggttcgtaaaagcgcagtcttttgt
atggtagcaatccatgtcgcagtcggcgaggaagcgttgaagccgcatctaagttgcctg
tactccagtaaactcaagctactgaacatctatatacaacgtgcgcagcaacaggcaaac
agtcaacctgcgagtccgcgtagtaacagcaagaattaa
DBGET
integrated database retrieval system
