Cyphomyrmex costatus: 108777338
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Entry
108777338 CDS
T11118
Name
(RefSeq) zinc finger CCCH domain-containing protein 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108777338
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
108777338
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM_14
Cmr2_N
Motif
Other DBs
NCBI-GeneID:
108777338
NCBI-ProteinID:
XP_018399691
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MREKRWLLLLALYGILLAHAVSAALKTRPKFKIATTSTTTTTTSTTEEPQVEENDQANSE
VCATTTVAIETNGTTGHTLTGIPQIDYIWDPNLPRELNGYNLSDYPFYNSIPEDIDFKCD
GLHDGFYASVPHKCQVYHHCLFGTRYDFLCANFTAFDQKTFICHFVSEVDCAHSKKYWHR
NDALYQAATTTTTTTTTVAPVTVPTSRAPGRDRISPRRRPPARRRPYDYYEEDYYDDEYD
RSRDDYEYDDRKYRRDRDREFRDRDRDRDFRDRDPPARGRDDRDRDTARDRYPARGNRRD
PPRSRDPLEDDLRPRGRNPDQGIRSTSREVEDSNVYDRRPESRNRDTDERRYSDKRYRDD
YDDKEPTAPSASASSNAEGLVKPAAPSSSVYSRPRTPPKIRRPVPLSEQDKYAYKTTPAQ
PTEEPRRRPADLTEDDYYDDELEDIRPSRRPLRRRPSYRDRDRDRDFYETRDRDRPLRTR
YHSPPEEVRLRTHQDRSRDRYYDRDRDRNRDRALERGKDRSPERSSDRDSRGRSQDSERQ
ERPYSSRVLDREREAERSRSSSRSKDLLDTTEVSKRPNPYDRTTEKTTTTTSTTTTTTTT
CLPEQLIRKPEEESKDAVTDRLEKPSYPERPARPVQTQSGRVVSDTEDYHRNLSDKSQRP
SQQVDYQDRELESRNEQNHQIAYPDEYSSEYYDEPLEEPPSPPPPRTTVRIVKRPFLPSR
GGNPNPRGLLPVGSKASHSPRRDEETTTDHRGTLGENDYRNYYVQEEQEDNRNINHQESP
LRPDNKQTYDAYKAVQSDLQKKQRQEEYDSAISRPVLRKPIEKNNEEEVSRDPEDLSNSS
KGYSTQNQSYDSRSHQSENLTPKWIENYSSEKHANVGNVQTSSGSPIRSKVRLSSIETTP
TIYSSTYRNEDIQDLPSGPGSYRAKQRINEVTHRLQDIPESEYDVTLNDALTPTLVQEAN
LPSGFVLPLHRQLGRDTVLQPSENNYKLSRPINQQQQQQHQQKSFIPNQFLPSISNNDRS
RTVYYRTPEAIQISGAQYRQQRPWQDYTTY
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcgggagaaacgatggctgctgctgctcgctctgtacggaatcctattggcccacgcc
gtctccgcagcacttaaaaccaggccaaaattcaagattgcaacaacttctacaacaacg
acgaccaccagcacaacagaggaacctcaagtggaagaaaatgatcaagcgaattcagag
gtatgtgcaacgacaacagtcgcgatcgaaactaacggaacgaccgggcacactttaacg
ggaattccacagatcgactacatatgggatccgaatttaccacgcgaattaaatggctat
aatcttagtgattatccattttataatagtatacccgaggatatagatttcaaatgcgat
ggcttacacgacggattctacgctagtgtgccgcacaagtgtcaggtctaccatcattgt
ctctttggcactcgctatgacttcctgtgtgccaatttcacggcgttcgaccagaagacc
ttcatctgtcacttcgtatccgaggtcgactgcgctcattccaagaagtactggcacaga
aacgatgctctttaccaagctgctacgactacgacgactactacgaccaccgtggcgcca
gtcactgtgccgaccagtcgagcccctggacgtgatcggatttcacctagaagaagacct
ccagcgaggagaagaccctatgattattacgaggaggattattacgacgatgagtacgat
cgttcgcgagatgattacgagtacgatgatcggaaatacagacgggaccgggatcgtgag
ttcagggatcgggatcgtgatcgtgacttccgggatagggatccaccagcgcgcggtaga
gacgatagggatcgagataccgctagagacagatatccggcgaggggaaatagaagggac
ccacccaggtcgagggatccgctggaggatgacttgagacctcggggaaggaatccggat
caaggtatcagatctacatcgagagaggtagaagattcaaatgtttacgatagacgtccg
gagtcgagaaacagggataccgatgaacgaagatattccgataagagatacagagatgat
tacgacgataaggaacctacagcaccatcggcgagtgcgtcgtctaatgcggaaggcctg
gtgaagccagctgcacctagtagttcggtttattcgaggccaagaacaccaccaaagatt
agacgaccagtaccactttcggaacaagataaatatgcgtataaaaccactcctgcgcag
ccaacagaggagccacggcggcgaccagcagatttaacagaggatgactattacgatgac
gaattagaggatatcagaccaagcaggaggccactcagaagaagaccttcgtacagagac
agagacagagatagagacttctatgaaactcgggatcgggatcgtcccctcagaactcgt
tatcactcaccgccggaagaagtacgactcagaacgcatcaggatcgctcgagggatcgt
tactacgatcgagacagggatcgaaatagagatcgagctctcgagcgtggaaaagatcgc
agtcctgagagatcctcagatcgtgattcacgaggaaggtcgcaagattccgaaagacaa
gaacgaccgtattcgtcacgggttctcgatcgcgagagagaagccgaacgatcgcgatcc
tcctcgagatcaaaagatctattggataccactgaagtatccaaaagacccaacccgtac
gatcgaacaaccgagaagaccaccaccacaaccagtactaccacaacaactacgacgact
tgtttaccagaacagcttattcgtaaacctgaagaagagtctaaagacgcggtgaccgat
cgattggaaaagccatcttatccggaacgaccagctagacctgttcagactcaaagtggt
cgtgtggtaagcgatactgaggattatcacagaaatttgtctgataaatcccaaagacca
tctcagcaagtggattaccaagatagagagctggaaagtagaaacgaacagaatcatcaa
atcgcgtatccggatgagtactcttccgagtattacgacgagccactggaagagccacca
tctcctcctccgcctcgaaccaccgttcgaatcgtgaagaggcctttcctaccgtctcga
ggcggtaatcccaacccgagaggattattaccggtcggctctaaagcgtcgcattcgcct
agaagagatgaagaaacaacgactgatcatcgaggtactttaggcgagaatgactacagg
aattattacgtacaagaggaacaagaagataatagaaatattaaccatcaggaatcacct
ttgcgaccggataataagcaaacgtatgacgcttacaaagccgtccaaagcgatcttcag
aaaaaacaacgtcaggaagagtatgatagcgcgatatccagaccagtgctacgaaaacca
atagagaagaacaatgaagaggaggtctcgagagacccagaagatttatcgaactcctcc
aaaggatactccactcagaatcagtcgtatgattcacgtagccatcaaagcgagaatcta
acgcctaagtggatagagaattattcgagcgaaaaacacgcgaatgtcggcaacgtgcaa
acatcctcgggttctccgatccgcagcaaggtgagactttcttccatcgagactacgcca
accatctacagctctacgtacaggaacgaggacattcaggatctaccatcgggaccaggt
agctacagggcaaaacaaagaatcaacgaagtaacgcatcgtcttcaagatattcccgag
agcgagtacgatgttactctgaatgacgccctgacgccgaccttggttcaggaagctaat
ttgccgagcggattcgtcttgcctcttcacagacagcttggtagagacaccgtgttacag
ccttccgagaataactacaagctctccaggccgatcaatcaacagcagcaacagcagcat
caacaaaaatcgttcattccgaatcagttcctgccgagtatcagtaataacgatcggagt
cgaacggtgtattacaggacgccggaggctatacagatcagcggagcgcaatacagacag
cagagaccatggcaagattatacaacgtactaa
DBGET
integrated database retrieval system
