Cyphomyrmex costatus: 108777635
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Entry
108777635 CDS
T11118
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccoa03041
]
108777635
03009 Ribosome biogenesis [BR:
ccoa03009
]
108777635
Spliceosome [BR:
ccoa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108777635
Ribosome biogenesis [BR:
ccoa03009
]
Eukaryotic type
90S particles
RNase
108777635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Atthog
DBR1
Metallophos
L_HMGIC_fpl
Metallophos_2
AGP
Motif
Other DBs
NCBI-GeneID:
108777635
NCBI-ProteinID:
XP_018400075
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MRIAVEGCAHGELDIIYETIQEIEKIDGRMIDLLICCGDFQATRNLSDLKCMAVSDKYKD
MCTFYKYYSGEKEAPILTIFIGGNHEASNYLQELPYGGWVAPNIYYLGYAGVIQVAGIRI
AGLSGIYKSRHWMQGHYEKPPYTDSTIRSVYHIRNLEVFRLKQLSGKIDIFLLHDWPAGI
TKYGDEDTLLKQKPFFKEDIENNALGSPPCMELLERLYPSYWFSAHLHCKFAALVPEKGG
ARVTKFLALDKCLPKRKFLQILEVRSQEDGPIQLNYDLEWLTILYLTNHLLSVKSSIHYM
PGQYGIGRWSYTPTAKEKQTVYEKFASNLRIPLNFTRTVKPYDPCNINTQTEWPRLLIND
QTTRFCEMLGIDDPSALLQIIANTAMDNSRSSELSMETSGEYTSESMDISFDEESVFSST
FEENNSTNKYFVDNSPTNFSPKSDGDDSDNRDTSKSTLDETVNNSTTEIVDFTSMDDSNE
KTCVQTEPNCKKFKRRNYSVYSSTRKMDKLTVISVVLFFVADISAIISISMPDWIITDVG
GDTRLGLMWSCMTLYNRPQVCFKSELELEWLLALVCIFIGCILITATVILLMLSHWDRTV
IPFARWVGFTAMILFCHAAVIFPMGFYIDEIGGQPYQLPNSHQVGIAYILFVLALWITVI
SELFAGKVCLPHF
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgctgtggagggctgcgctcatggcgaactggacattatttatgagactata
caggaaatcgaaaaaatcgatggaagaatgatagatctgcttatttgctgcggcgatttt
caagcgaccagaaatttgagtgatttaaaatgcatggcagtatcagataagtacaaggat
atgtgtacattttacaaatattattctggtgaaaaagaagctcctatattaaccatattt
attggaggcaatcacgaagcatcaaattatctgcaggaattgccatatggaggatgggtt
gcacctaatatttattatcttggatacgcaggtgtaatacaggtagctggaatcagaatt
gctgggctttcaggtatatacaagagtcgacattggatgcagggacattatgagaagcct
ccctatactgatagtactatacgaagtgtctatcatatcaggaatctagaagtgtttaga
ttaaaacagctttctggtaaaattgatatttttttattacatgattggccagcaggaata
acaaaatatggagatgaagatacattgctgaaacaaaaaccattttttaaggaagatata
gagaataatgcacttggcagtcctccatgtatggaactgttagaacgtctttatccgtcc
tactggttctccgcgcatttacattgcaaatttgcagcactcgttcctgagaaaggagga
gcacgagtgacgaagtttttagcgctggacaaatgtctgccgaaacgaaaatttcttcag
atactggaggtgcgttcacaggaagacggtccaatacaattgaattacgatctggaatgg
ttaacgatactttatttgacgaatcatctactgagcgtcaagagtagtattcattatatg
cctggtcagtatggcattggcagatggagctacacacccacggcaaaggagaaacaaact
gtctatgagaaatttgcctccaatttgcgaattcctctcaactttactcgaactgtcaaa
ccgtatgatccgtgcaacataaatactcagaccgaatggccgcgactgctgatcaatgat
cagactactcgattctgcgagatgctgggtatcgatgatccttctgctctactacagatt
atcgcaaacactgcaatggataacagtagatcgagcgaattgtcgatggaaacatccggc
gaatacacgtcagaatccatggatatctcattcgacgaggaaagtgtattcagttccacc
tttgaggagaacaattcaacaaacaagtatttcgtcgacaactcaccgacaaacttttcc
cctaagagtgatggcgatgattcagataacagggatacaagtaaaagtaccttggatgaa
actgttaataactcaaccacagaaattgtagatttcacttcaatggacgacagtaatgaa
aaaacttgtgtccaaaccgagccgaactgcaaaaagtttaaacgccgaaattattctgta
tactctagcacgcgaaaaatggacaagttgactgttatctcggtggtactcttctttgtt
gcggatatctccgccataatcagcatctccatgccggactggatcattactgatgtcggc
ggcgacacaagattaggtctgatgtggtcatgtatgactttgtacaacagaccgcaggtc
tgctttaaatcagaactggaattggaatggttgttggcattagtctgcatatttattggt
tgtattctgatcacagcaactgtaatattactcatgctgtcgcattgggatcgtactgtc
attccatttgcacgctgggtaggattcactgctatgatactgttttgtcacgcagcagtt
atatttccaatgggattttacattgacgagattggcgggcaaccctatcagttgcctaat
tcacatcaagttgggattgcttacattttatttgttctggctctatggattacagtaatc
tccgaactttttgcaggcaaagtttgtctaccacatttttag
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