Cyphomyrmex costatus: 108777657
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Entry
108777657 CDS
T11118
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2-like
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
108777657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108777657
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108777657
Factors involved in mRNA localization
Trans-acting binding proteins
108777657
mRNA cycle factors
P-body specific factors
108777657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
TFIIA
MAML2_TAD
Motif
Other DBs
NCBI-GeneID:
108777657
NCBI-ProteinID:
XP_018400104
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MGDYSATSLFSCTLTSPKPSTTTSNISSAITTSTMQDDLLIEKQTTGKPAPLSPSGGLDT
VAGQDKSKDVIEAENIAITPTTPSSTEKDITCSTTSVLQGFADPGGRVPSLWSAPDDSGL
HTALPVNGCXAAAAAAAAAVSTGTRRAITASHNFPQQQQQQHGNAGAPTGTRHGGLQVSS
AQQQQQQQQQQQQQQHQQQQQQQQPPPTSHPSVYLPGKGYAAWSGGPQAPQQWGAGPQTT
AAAAVASPGLSPWNRGRSVPNLPPLHSSLHAAAAVAAAAGLQGRKPSPTFPGHPGPAAAH
PSCISPVKFRRSTSYPGKGNIYPPQPAPTFEVTAAEERDLLQLPPFQQDRMTANGNSPLD
NMRTLEHYLSDIMRAGAADTPEHLKGFINCNTANTLQSLAQLHGKSPFFPSLDEQGLEDP
NAPSQLDGVGVGVGVGVGVGVGGGITASQAAPLSSPSRSSPHSQGSETGERFSRKVFVGG
LPPDIDEDEITASFRRFGPLVVDWPHKAESKSYFPPKGYAFLLFQDEGSVQQLIDACIQD
EDKLYLCVSSPTIKDKPVQIRPWRLSDADFVLDASMPLDPRKTVFVGGVPRPLKAVELAM
IMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGDIDKRVEVK
PYVLDDQMCDECQGQRCGGKFAPFFCANVTCLQYYCEHCWATIHSRPGREFHKPLVKEGA
DRPRAVPFRWC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgggggattacagcgcgacgagcctcttctcgtgtaccctgaccagcccgaaacctagc
acgaccacaagcaacatcagcagcgccataacgacatccacgatgcaggacgatctactg
atcgagaagcaaactaccggtaagcccgctccgctctcgccgagcggtggcctcgacacc
gtggccggacaagacaagtcaaaggacgtgatcgaggcggaaaacatcgccatcactccg
acgacgccctcgtcgacggagaaagacattacgtgcagtacgacatcagttttgcagggc
ttcgctgatcccggtggccgtgtacccagtctctggtccgcgcccgatgatagcggtctg
cacaccgcgttaccggtcaatggttgcnncgccgccgccgccgccgccgccgccgcggtt
tcgactggcacgcgacgtgccatcacggctagtcataactttccgcagcaacaacaacaa
cagcacggtaacgcgggtgcgcccaccggcaccagacacggcggtttacaggtgtcgtcc
gcgcaacagcagcaacaacagcaacagcagcaacaacaacagcagcaccaacagcagcag
cagcagcagcaacctccgccaacatcacacccaagcgtttatctacccggtaaaggatac
gccgcgtggtcgggcggaccgcaggccccgcaacaatggggcgcgggcccgcagacgacc
gctgctgccgcagtcgccagtccgggcctgtctccctggaaccgcggtagatccgtaccc
aatctaccaccgctgcactcgtctttacacgccgccgcagcggttgcggccgcagctggt
ctgcagggtcgcaagccgagtccgacgtttccgggtcatccgggcccggcagcggcgcat
ccctcctgcatcagcccggtcaagttccgtcggagcacgtcgtatcccggcaaaggcaac
atatatccacctcaaccagcaccaaccttcgaggtaaccgccgccgaggagagagatctg
ctgcagctgccaccgttccagcaagatcgtatgacggctaatggaaactcaccgttggac
aacatgaggactttggaacactatctgagcgacattatgcgagccggtgcagcggacacc
ccagaacatctgaaaggattcataaactgcaacaccgccaacacgttgcagtcgctcgcg
cagctacatggtaaatctccgttcttcccgagtctcgatgagcaagggctggaggatccg
aatgcgccgagccagttggacggcgtcggcgttggcgtcggagtaggcgtcggcgtcggc
gtcggtggcggaataacggcgtcccaagcggcgccgctctcatcgccaagtcggagcagt
ccgcatagccagggaagcgaaaccggcgagcgtttctcgaggaaagtcttcgtcggtgga
ttaccgcctgatatcgatgaagacgagatcacagccagtttccgccgctttggtccgctt
gtcgtggactggccgcacaaagcagaaagcaaatcttacttcccgccgaaaggctacgca
tttctgctgttccaggacgagggttcggtacaacagttgatagatgcctgcatccaagac
gaggacaaactttacctttgcgtaagttcgcccacgatcaaggataagcccgtgcagatt
cgaccttggcggctcagtgatgccgactttgtgctggacgcctccatgccgctcgatccg
cgaaagacagtctttgtcggcggggtgccgcggccgctcaaggcagtcgagctcgcgatg
atcatggatcggctttatggtggtgtctgttatgctggcatcgacactgatcctgagctc
aagtatcccaaaggtgccggcagggtcgccttcagtaatcagcaaagctacatagctgcc
atctcagccagattcgtacagctgcagcacggcgatattgacaaaagggttgaagtcaaa
ccatatgttctggacgatcagatgtgtgacgaatgtcaaggccagcgttgcggaggcaag
tttgcgccgttcttctgcgccaacgttacctgtctacagtactactgcgagcattgctgg
gcaactattcactcccggccaggtcgggagttccacaagccgctggtgaaggagggcgcg
gatcggcctcgggccgtgcctttccgttggtgttaa
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