KEGG   Cyphomyrmex costatus: 108777792
Entry
108777792         CDS       T11118                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03030  DNA replication
ccoa03410  Base excision repair
ccoa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108777792
   03410 Base excision repair
    108777792
   03420 Nucleotide excision repair
    108777792
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccoa03032]
    108777792
   03400 DNA repair and recombination proteins [BR:ccoa03400]
    108777792
Enzymes [BR:ccoa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     108777792
DNA replication proteins [BR:ccoa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    108777792
DNA repair and recombination proteins [BR:ccoa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      108777792
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N NAPRTase_C
Other DBs
NCBI-GeneID: 108777792
NCBI-ProteinID: XP_018400256
UniProt: A0A195CD39
LinkDB
Position
Unknown
AA seq 2243 aa
METLQNTGAFRPPKAVNKRNPNQEANAPGENALGKLLEIKEDIKIDAIYGFRRVTDSKER
IGFLLNMHATEIVEDDKHMLSGVDYYFIEEDATRFKVSLPFSPYFYILCRKDTFEEVSTF
LFKKYTGILTKIETVYKEDLDLPNHLIGLKQKYLKLYFANIIDLTKVKRDIMRFVRVNKE
REKSNTYYTDMLATTLQPNEQQDSSKQSLDHMDNVLDIREYDVPHHVRVSIDANIFCGIW
YSVKSRGSEPPIITRKEDMIEPPEPIVLAYDIETTKLPLKFPDSSIDQIMMISYMIDGQG
YLITNRELISADIQNFEYTPKPEFEGPFTIFNEPNEKAAIIRFFDHINAIRPHIFVTYNG
DFFDWPFVEARAAIHNMDMKEKIGFYKNREGVYVSRAAMHMDCLCWVKRDSYLPVGSQNL
KAVAKAKLRYDPVELDPEDMCRLASEEPEVLANYSVSDAVATFYLYQKYIHPFIFALCTI
IPMEPDEVLRKGSGTLCESLLMVQAFQANIIFPNKQETELNKLTKDGHLLDQETYVGGHV
EALESGVFRADIPCRFKIVPSAVDELISGVEKALKHTIQEEEKVPIDMVTNFDEIVNEVK
RKLKALKDQPLRLENPVIYHLDVGAMYPNIILTNRLQPSAIVNEMDCAVCDYNRPDALCQ
RQMKWMWRGEYLAASLGEYQRIKQQLETERFPPYFPGGPKRAFHQLNIKDQATYQKNRLT
EYCKKAYKKAKITRMEERTQTICQKENSFYVDTVRAFRDRRYEYKALTKVAKRQVAAAIA
QGDAADIKSAKNREVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMGGIVCYTGAHIIM
KAREIIEQIGRPLELDTDGIWCILPASFPDSIIVHTTHEKKSKFTVSYPNAVLNFMVKDQ
FTNEVYHELVDKNDLTYEIKSENSIFFEVDGPYLAMVLPAAKEEGKKLKKRYAVFNFDGS
LAELKGFEVKRRGELQLIKIFQASVFESFLKGNTLEECYASVAKDANYWLDVLYSKCTNM
PDSELFELISENKSMSRKLEEYGAQKSTSISTAKRLAEFLGDEMVKDAGLACRYVIANKP
QSAPVTERAIPLAIFQSEPAVRRHYLKKWLKDPTLYSDDIRDILDWNYYIERLGSAIQKI
ITIPAAMQGLPNPVPRVQHPPWLHKKVMEKSTSHRQKKITDIFSVVDKNTSHANSAEESC
DIEDLARPSTSFTTPMPVVNKRKRQHSDEDETIRAKSWKEALGSPPPKGTTREERLKWLE
FHKKKWAFQAKQRNQHRKKRSKTDETAGIGWGVIRNTNTSTLTGFLRRAQRKLLETPWQI
IQLSETGEPGMFRLWILVDTQLHQVRLVVPRVFYVNTRKARPDPGPNELWKKSFKSLPRS
RPVYNLYRYSLPESLFQEHSRELLEDLNKPEIEGIYETQMSLEFRAILQLGCVCIVDPRA
ARKVVDGADTFTLDQLEYKSIAFHPYLKQTELINYIFLYHHWSSNRQRAIWGLFLSASRR
AHIFVLDSVASNQLPNMTALYTNERKAILETDGKDNISKLPEIMQFMIQAETNFQHVCRT
LQAALTTYKNENHGATIIINQTALDKTVLTTEMPLLNDFPLVNTNVRDVENLYSTLEWQK
IGAKMMINHYLKSQQIVELITEQCRYFHAPVGNIPADTSLFGADLFYARNLYRNNFVLWC
SPTEKPDLGGSENDDNRLLMDFEESSSCAANNPGTYSSVCVQLEVDYLAVSALLQYNHIH
DIDGTSTFVAFNNQQRPSVQDMAMGSDAATVIPSYDEITLCNPAFKILRNMVNTWLLDVS
LYKNAFADYQLIHFYRWLRSSNALLYDPALRRTLHTYMKKLYIQLIAHFKTLGCVIVFAN
FNKIIVCTKKRSVSDALGYIEFVVQTIQNKELFHSVDISCEQCWEYLVWLDLHNYAGIKG
QSPKDDTENDEDTENDDDDTLLIMNWSLMECLPIEAGCQASFNAVVAGYIRAVHQCMLEN
ETNNTIRPRRRRSQSQSFITPLGLGALENTAEFAKKLISEEISQRLFQIVQKIHRNLTEK
TLTLQEYPNLDMNGKESIKINPALELIKAVCKVLSLDKEVEHEVYNLKANLLRLIGVGSY
SDNVEWKEPCISLVLPQVICKVCNRTRDIDLCKDEYYTNENTKFMWKCPNCDASYDNTEI
EFSLIDKLNRKSMAYVLQDLQCQKCKEIKRENMNLLCSCSGEYNNLISRDEVTSYVNICK
SIATKCKMNILAEIVDNTKLFTS
NT seq 6732 nt   +upstreamnt  +downstreamnt
atggaaactttgcaaaatactggagctttccgtccgcctaaagcggttaacaaaagaaat
cctaatcaagaggccaatgctccaggggaaaatgcattgggaaaattgctcgagatcaag
gaagatatcaaaatcgatgctatatatggatttcgtcgagtcaccgactcgaaagagagg
ataggatttttgcttaatatgcatgcgacagagatcgtagaagatgataagcacatgttg
agtggagtggattattactttatcgaggaagatgctacaaggtttaaagtgtcattaccg
ttttcaccatatttttacattttatgtcgtaaagatacatttgaggaagtgtcgactttt
ttgtttaagaagtatacaggaattttgacaaaaatcgagacagtctataaagaagatcta
gacttgcctaatcacttgattggtttgaaacaaaaatacttgaagctttattttgcaaat
attattgatttaacaaaagttaaacgtgacattatgcgttttgttagagttaataaagaa
cgagagaaaagtaatacttattacacagacatgttagcgactactttacaaccaaatgaa
caacaggacagtagtaaacaaagtttagatcacatggataatgttcttgatattagagaa
tatgacgtacctcatcatgtccgagtatctatagatgctaacattttctgtggaatttgg
tattctgtaaagagcagaggaagtgaaccacctataatcacgcgaaaggaggacatgatt
gaaccacccgaacctattgtattagcatatgatattgaaactacaaaattgccattgaag
tttccagactccagtatcgatcagattatgatgatatcatatatgatagatgggcaggga
tacttaataacgaatagagaattaatctctgcagacatacaaaattttgaatatacacca
aaaccggaatttgaaggtccttttacgatattcaatgagcctaatgagaaagcagctatt
ataagatttttcgaccatattaatgcaataagaccgcatatatttgtaacatacaatggc
gatttcttcgactggccatttgtcgaagctcgagctgctatacataatatggatatgaaa
gagaaaattggtttctataaaaatcgcgaaggtgtttacgttagtagagctgctatgcac
atggattgtttatgttgggtaaaacgtgattcgtatctcccagtgggttctcaaaattta
aaagctgtcgctaaagctaagttgagatatgacccagtggaacttgatccggaagatatg
tgcagattagcatcggaagaacctgaagttctagcaaactattctgtctctgatgctgtg
gcaacgttttatctctatcaaaaatacattcatcctttcatatttgcattatgcactatt
attcctatggaacctgatgaagttctcagaaaaggatctggtacactgtgtgaatcactt
cttatggtacaagcttttcaagctaatatcatattccctaacaaacaagaaactgaatta
aataaattaacaaaagatggccatttactggatcaagaaacgtatgtaggtggacatgta
gaagccttggaatctggtgtctttagagctgacattccttgccgttttaaaattgtgcct
agcgctgtagacgaattaattagtggtgtagaaaaagccttaaaacacacgatacaagaa
gaggaaaaagtaccaatcgacatggttacgaattttgatgaaatagtaaatgaagttaag
agaaaattgaaggcacttaaagatcaacctttgagattagaaaatcccgtaatttatcat
ttagacgtaggcgctatgtatcctaatataattttaactaatagattgcaaccttccgcg
atagtaaatgaaatggattgtgcagtgtgtgattataacaggcctgacgctctttgtcaa
agacagatgaaatggatgtggcgaggcgaatacttggctgcaagtttgggtgaatatcaa
agaataaaacagcaattagaaactgaaagatttccaccatattttcctggcggtcctaag
agagctttccaccaattgaacataaaagaccaagctacgtatcaaaaaaacagactcacc
gagtattgtaaaaaggcgtataaaaaagcgaaaattactagaatggaagagagaacacaa
acaatttgtcagaaggagaattcattttatgttgacactgtgagagcatttagagataga
agatatgaatataaagcgttaactaaagttgctaagcgacaagtagcagcagcaatcgcg
caaggagatgcggctgatataaagtctgcaaagaatagagaagttttgtacgattctctt
cagcttgctcataaatgtattctcaattctttctatggttatgttatgagaaaaggagca
cgatggcatagcatggaaatgggtggcatcgtatgttatacaggagctcatattatcatg
aaagctagagaaattatagaacagattggtcgcccattggaattagatactgatggtata
tggtgcatattacctgcatcttttccagactctattatagttcatactactcatgaaaag
aaatcgaaatttacggtctcgtatccgaatgcggtccttaatttcatggtaaaagatcaa
tttactaatgaagtatatcatgagcttgtggataaaaatgatttaacatatgaaatcaaa
agtgaaaattccatattttttgaagttgatggaccgtatctagcaatggtgttacctgct
gcaaaagaagaaggaaaaaaattgaagaaacggtacgcagttttcaattttgacggttcg
ctagccgaactaaaaggatttgaagtaaaaagaagaggtgaattgcaattgataaaaatt
tttcaagcttctgtttttgaatccttcttaaaaggaaatacgttggaagaatgttatgct
tcggttgcgaaggacgcaaattattggttggatgtactgtatagtaaatgtacgaatatg
cctgattccgaattgttcgaacttatatccgaaaacaaatccatgtcgcgtaaattggaa
gaatacggtgcacagaagtccacgtcgatttctacggctaaaagattagccgaattctta
ggtgacgagatggttaaagatgcaggtttagcttgtagatatgttatagcgaataaaccg
caaagcgcaccagttactgagcgtgcgataccgttagctatttttcaatcagaaccggct
gtgcgaagacattacttgaaaaagtggttgaaggatcctactttatacagtgatgatata
agagatattttagattggaattattacattgagcgactcggaagcgctattcaaaaaata
atcactataccagcagcgatgcaaggcttaccgaatccagttccacgagtgcaacatcca
ccatggttacataaaaaagtgatggagaaaagtacatcacatcgtcaaaaaaagattaca
gatatattttctgtagtagataaaaacacttcacatgcgaacagcgccgaagagtcctgt
gatattgaagacctcgcaagaccatccactagtttcactacccctatgccggttgttaac
aaaaggaaaaggcagcattcagatgaagatgagacaatcagagccaaaagttggaaagaa
gctctgggttcacctcctcccaaaggaacaactagagaagagaggctcaaatggttggaa
tttcataagaaaaagtgggccttccaggctaaacaaagaaatcagcatcggaagaagaga
agtaagactgacgaaaccgctggaatcggttggggagttatacgaaatacaaatacgtct
actttgactggctttttgagacgtgctcaaaggaaattgttggaaactccgtggcaaatc
attcagctatcggaaaccggtgaacccggcatgtttcgattgtggatactggtcgacaca
cagctgcatcaagttcgtctcgtagtaccccgagtattttacgtaaacactcgcaaagca
agacccgatccaggacctaacgagctctggaaaaaaagtttcaaatctttaccacgctct
cgcccggtatacaacttgtatcgatattctctgccagaatctctatttcaagaacatagt
cgggagctcttagaggacttaaataaaccagaaattgaaggaatctacgagacgcaaatg
tcattagaatttcgggccatattgcagttaggatgcgtatgtatagttgatccgcgtgct
gcgcgtaaagtagtagatggagccgatacatttactctagatcaattggaatacaagagt
atcgcttttcatccttacctcaaacaaaccgagctgatcaactatatatttctctatcat
cattggagttcaaaccgtcaaagagcaatatggggcttattcttaagcgccagtaggaga
gctcacatattcgtcttagattcagtcgcttccaatcaactaccgaacatgactgcatta
tacacgaacgaacgtaaagcaatattggaaacagatggcaaagacaatataagcaaattg
cctgaaataatgcagtttatgatacaagctgaaacaaactttcaacatgtgtgtcgtacg
ttgcaagcagccttaacgacatataagaatgaaaaccacggtgctacaattattattaat
caaactgctcttgacaagactgtgttaacaacagaaatgccacttctcaatgattttcct
ctcgtcaacacgaacgtgcgagacgttgagaatctgtacagcacgttagaatggcagaag
attggcgcgaaaatgatgatcaatcactacctgaagagtcaacagatcgtcgaattaatt
acagaacaatgccgatactttcatgcacctgttggcaacatacccgcagatacttcactc
tttggcgccgatttattttacgctagaaatttgtacaggaataattttgttctgtggtgt
tcgcccacggagaaacccgatttaggtggtagcgagaatgacgataacaggctactgatg
gactttgaggagagttcgagctgcgctgcgaataatccaggcacatattctagtgtttgc
gtccaattagaagtagattatttggcggttagtgcattgttgcaatacaatcatattcac
gatatagacggaactagcacgttcgtggcatttaacaatcaacagcgtccatctgttcag
gatatggcaatgggtagtgatgctgcaacagttattcccagttatgacgaaatcacttta
tgcaatccggcgtttaaaatattgcgaaacatggtaaacacatggttgcttgatgtatct
ctatataaaaatgcattcgcggattatcaattgatccatttttatcggtggctaagatct
tcaaatgctttgctttatgatcctgctctacgccgtactctacatacttacatgaaaaag
ttatatatacaattaatagcacactttaaaacgttaggttgtgttatagtttttgcaaac
tttaataagattattgtatgcacgaagaaaaggtctgtgagcgatgctttaggctatata
gagtttgttgttcaaactatacaaaacaaagagctgtttcacagtgttgatatttcttgt
gaacaatgttgggaatatttagtatggcttgacttgcataattacgctggtattaaagga
cagtcacctaaagatgatacggaaaacgatgaggatactgaaaatgatgacgatgacacg
cttctaatcatgaattggagtttaatggaatgcctgcctatagaagcaggatgtcaagca
agttttaatgctgtagtagcaggatatatacgtgcagtacatcaatgtatgcttgagaat
gaaaccaataacactataaggccaagaagaagacgcagccaaagtcaatcgtttataaca
ccacttggtttaggtgcattggaaaatacagccgagtttgcaaaaaaattgatatcagaa
gaaatatctcaaagattattccaaatagttcaaaagatacatcgaaatttgacggaaaag
acattaactctccaagaataccctaatttagatatgaatggaaaagaaagtataaaaatt
aatcctgcacttgaattaatcaaagcagtatgcaaggttttatctctggataaagaggtg
gagcatgaggtttacaacttaaaagcaaatcttttacgactaattggagtcggcagttat
agcgataatgttgagtggaaggaaccatgtatttctcttgttttaccacaagttatatgc
aaagtatgcaatcgcacaagagatattgatctttgcaaagatgaatattacaccaatgaa
aataccaagttcatgtggaaatgtcctaactgtgatgcatcttacgacaatacagaaata
gaattttcactgattgacaaattgaatcgtaaaagtatggcttacgtattgcaagatcta
caatgtcaaaagtgtaaagagatcaaacgagaaaacatgaacttgttatgttcttgctca
ggcgaatataataatttaatctcaagagacgaagtcacaagctatgtaaatatatgtaaa
tctatagccacaaaatgtaaaatgaatattttagcagagatagtagataacacgaaactg
tttactagttag

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