Cyphomyrmex costatus: 108777882
Help
Entry
108777882 CDS
T11118
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccoa03037
]
108777882
Cilium and associated proteins [BR:
ccoa03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
108777882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_WDR19_1st
TPR_12
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
TPR_7
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
TPR_2
ANAPC3
TPR_COPA_B
Hira
WDR90_beta-prop_4th
TPR_GEMI5
PPR_long
TPR_8
Motif
Other DBs
NCBI-GeneID:
108777882
NCBI-ProteinID:
XP_018400368
UniProt:
A0A195CD47
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MTLYFDIRVQNPESASISTLTTWHNNYPLLAVAAYSQDKGGFVVIYDDQGELVQDVESPG
HTVAQVTALGWHPEKTWLAAGWENGDLRVWPGDTGTQEFNVIVTPHRDIITILQWSQYGG
CLVSADTGGSIVGWKIDSRGQLFMTFHHELKESFTQIAFRTIPLKPAVDISGLAKATVTG
DERAWDIFSSWRPRTAVPTAVPIQRDNHSFYIGTISGIIYFVDSQGQCKEVLSTDGAIVH
CLLYHQTRDSIIVMTEGLNIGHFQADSITGELTELTKVKLSCRSDSSRATSTTLCWISRN
TLAVLTGELAVRCWDIHTGDTYILSPPDLSNGNVATPQEICTSLAFCKANDTLATGTNLG
TIYLWKRKCMLDCDENSWPSVPESCAIHGTVKQLEWGVSLSRNSLLAVNCITNVFILHQQ
PMCAVYNDGVCASQLTPTQILLEMDEQLHTLKTEIQVQIIAVSREYIVVSSGRQIVVNCI
NKGANLNTNVLTTFSCDTEKILIYEHTLIVLTPTIIQLRSIEGSVIQTLPTLPEEGEPIT
MELTGHYLTVASLNGILKIWNLSKHEAKLHTRAMATYEMISDFAEIIEARCNSDCRCVSI
TVAMANLMPSSILYIWDIESDQIYEFDFGESDDIVDDDNMLVAQCKGRLVTAHCWDVEDP
RLLICRAQKLEKRDSKSLNKDNDWIVQTSVVLVSLFATSDHGIVVQDVKPIADENCRLLG
VHSPHIVILNSEKSLNRNSKIMQLLMRDFEELGKCDSITRKAVMDFSFHISVANMEEAFK
AIKSIKNEAVWKSLAKMCVKTKQLNMALLCLGHMKQANAARALREAMQDDTLSLEAQVGI
LAVELGLHTDAERLFREAKRLDLLGRLYEARNKFKEAIELASNENKIREKTSYYNYARAL
EQQDKVAEAIDMYTKADCHQFEVPRMLLMRPRELLTYLNNSEESEIKNWHAQYTESTGDM
ETALHLYEQAKDTLSMTRLLCYFGRENEVCELVTRTNHSAAAYHLAAHYESKNNVVQAIH
FYTVARAYTNAIRLCKEHDMLEELWPLTILAPRNSQIDVAKFYENNDQPDRAVLLYHKAG
LLHKALDIAFKTRQYSALQLIIMDVNADSDPALIHKCADYFMQNDQIDKAVDLLATGRDY
MAALDLIQQHNVVLSEELAEKLTIEKGSDDDTERERMRISILEKIAEITFDQGNYHLATK
KFTQAGNKLRAMKALLKSGDTEKICFFAQVSRNREIYIMAGNYLQSLDWQNQPEILKNII
NFYSRGKAMDLLANFYVACAQVEIDEFQNYEKALDALNQASRCLSKVMTPRDPDVHKRAI
DLVNNRMSAIKRYLDIKRLFDRGETETAMQQVRHLLDSQGPNLEQSVRRGDLFATITQHY
ANIGDTEKAWATIEELKRLVPGINLTYYFNINLLEALGYKMKVQRQDSSDKDDGIEELLG
E
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgactttgtattttgacatacgggtgcaaaatcctgaaagtgcttcaataagcactctt
acaacttggcataataactatcctttattggctgttgctgcgtattctcaagacaaaggt
ggctttgtagtcatttatgatgatcaaggtgaactcgtgcaggatgttgaatcaccagga
catacagtggcacaagtcaccgctcttggctggcatccggagaaaacgtggctagcagca
ggatgggaaaacggagacttacgagtatggccaggggatactggaactcaggagttcaat
gtaatagtaactcctcatcgagatatcatcacaattttgcaatggagtcagtatggtggt
tgtttagtatctgcagatactggtggatctatagttggatggaaaatagactctagagga
cagctattcatgacattccatcatgaactaaaggaatctttcacgcaaattgcatttaga
acaattccactaaaaccagctgttgatattagtggcttggcaaaagcaacagtgactggt
gatgagagagcctgggatatattcagttcttggcgtccaagaacagctgtaccaacagca
gttccaatacaacgggacaatcattcgttttatattggtactataagtggtatcatatat
tttgttgattctcaaggacagtgcaaggaagttcttagtactgatggcgcaattgtgcac
tgcttactgtatcatcagactagagattctatcattgttatgacagagggattgaatatt
gggcactttcaagcagattcaatcactggagagctcaccgaattgacaaaggtaaaacta
agttgcagaagtgattcatcacgagccactagtaccaccttgtgctggattagcagaaac
acattggctgtgctcacaggagaactcgctgtacggtgttgggatattcacacaggtgat
acatacatcttatcaccaccagatttatccaatggaaacgtcgccactcctcaggaaata
tgtactagcttggcattttgcaaggcaaatgacactttggccaccggtaccaatctaggt
acaatctacttatggaagcgaaaatgtatgcttgattgcgatgagaattcctggccgagt
gtcccagagtcctgcgcgatacacggcacagtaaaacaattggaatggggtgttagctta
tcacggaattctcttctggctgttaactgtatcaccaatgtgttcatcttacatcaacag
ccaatgtgcgccgtgtacaatgatggtgtttgcgcaagtcagctcactccgacacagatt
ctacttgagatggatgaacagttgcatacgctaaagacggagatccaggtgcagatcatt
gctgtatcaagagaatacatcgtcgtctcttctggtagacaaatcgttgtcaactgtatc
aataaaggtgctaatcttaatacgaatgtattgacaaccttcagctgcgatacggaaaag
atactgatctatgaacacacattgatcgtgttgactccaacgatcattcagttgagatct
atagaaggctctgttatccagacgcttcccactttaccggaggaaggcgaaccaatcacg
atggaattaacagggcattatttaactgtagcatcattaaatggtattctgaagatttgg
aatctgagcaaacatgaggctaagttacacactcgcgctatggcgacatacgagatgatt
agcgattttgccgaaatcattgaagctagatgtaattcggattgccgttgcgtctcaatc
actgttgccatggcaaatctcatgcctagttcgattttatatatttgggatattgaaagc
gatcagatttatgaatttgattttggagagtcggatgacatcgttgatgatgataatatg
ttagttgcacaatgcaaagggagattggtaacagcgcattgttgggatgttgaagatccc
agactactaatatgtcgagctcaaaaattagaaaaacgtgattctaagagccttaataag
gacaatgattggattgtacaaacttctgtagtgctggtatcgttatttgcgacatcagat
cacggtattgttgtacaagatgtgaagccgattgctgatgagaattgccgattgttaggt
gtacactcgccacatattgttatcctaaattccgaaaagagcttgaatagaaatagcaaa
attatgcagttattaatgagagactttgaggaactaggaaagtgcgattcaatcaccagg
aaagcagtgatggatttcagtttccatattagtgtggcgaatatggaggaggcttttaaa
gccattaaatctataaaaaacgaagctgtctggaagagtctggccaaaatgtgcgtgaaa
acaaagcaactgaacatggctcttctttgcctgggtcacatgaagcaagctaatgctgca
cgggctttacgtgaagctatgcaagatgatactttaagcttggaagcacaagtaggaatt
ttagccgtcgaacttggcctacatactgatgctgaacgtctgtttcgagaagcgaaacgt
ctagatctgttgggacgactgtacgaggcgcggaataaatttaaggaggcaatcgaatta
gctagtaacgagaataagatccgtgaaaaaacaagttactacaattatgctcgtgcgttg
gagcagcaggataaagtggcagaagctatcgatatgtacacaaaagccgattgccatcaa
tttgaagtgcctagaatgcttttgatgaggcctcgagaattactcacgtatctgaataat
tccgaagaatcggagattaaaaattggcatgctcaatacactgagtcgaccggcgatatg
gagaccgccttacatctttatgagcaagcaaaggatactctgtcgatgacaagattactt
tgttatttcggtagggagaatgaagtgtgtgaactagtaactagaacaaatcattctgca
gcggcataccatcttgctgcacattatgaatcgaagaataatgtggtacaggcgattcat
ttctatacggttgctagagcttacactaatgcaatacggctatgtaaggaacacgacatg
ttggaagaactgtggccactgactatattagcgccacggaattcgcagatagacgtcgcc
aagttttatgagaacaacgatcaaccggatcgtgcggtactgttatatcataaagctggt
ctcttacacaaagctttagacatcgcgttcaaaacacgacagtatagcgcattgcaactg
attatcatggacgtaaatgcggattctgatccagcattaattcacaagtgcgccgattat
ttcatgcagaacgatcaaatcgataaggcagtggatctactcgcaaccggcagagattac
atggcggctttggatctgattcagcaacataatgtcgtgctaagcgaagaactcgcagag
aagctgacgattgaaaaagggagcgacgatgatacagagcgtgagcgtatgagaatttct
attcttgagaaaatcgcagagatcacctttgatcagggaaattatcatcttgcaactaag
aaattcacgcaagctggcaacaagctacgcgccatgaaagcattgctcaaatccggagac
accgaaaaaatctgctttttcgcgcaggtttcaaggaaccgtgaaatctatatcatggcg
ggcaattatttgcaatctttagattggcaaaatcaaccagagattctgaaaaacataatt
aatttttactccagaggcaaagccatggatttattggcgaatttttatgtggcatgcgca
caggtggagatcgacgagtttcaaaattatgaaaaagcgttggatgcactgaaccaagcg
agcagatgtttatctaaagtgatgacgccacgagatccagatgttcacaaacgggcaata
gacctggtaaacaacagaatgtcagcaattaaacgttatttggatattaaaagattgttc
gatagaggtgagacagaaacggcaatgcaacaagtacgtcatctgctcgactctcaagga
cctaatttagaacaatcagtgcgtcgcggtgatctatttgcaacgattacacagcattat
gccaatataggggacacagagaaagcttgggcgaccatcgaagaactgaaacgtctagta
ccaggaatcaatttgacttactactttaatataaatcttctagaagcactgggctataaa
atgaaagtgcaacggcaagatagttccgacaaggatgatgggatcgaagagctcctggga
gaataa
DBGET
integrated database retrieval system
