Cyphomyrmex costatus: 108777901
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Entry
108777901 CDS
T11118
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccoa03009
]
108777901
Enzymes [BR:
ccoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108777901
Ribosome biogenesis [BR:
ccoa03009
]
Eukaryotic type
90S particles
Helicases
108777901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
HEM4
Motif
Other DBs
NCBI-GeneID:
108777901
NCBI-ProteinID:
XP_018400398
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MDAHDLFKKLAAGVKFDINRFRKDAERFQMVKPSKNDINNTVKKIKDEILQPTESKAKRK
YKDQNEDVDEITLLDGLSVPKDGGVSVKKRKKVATADKLLKLEQEKINHLRNMNRISVTG
SHVPKLILEFEELKTNYQVSESLINNMKNSGYMYPTPIQMQAMPIMLEDRQILACAPTGS
GKTAAFLLPIIHSLRGPQKKGFRAVILNPTRELAKQTYRECLKLSDGCDFRIHIISKVNQ
ALTKYGPSSSQKFDILITTPKRLVFLLNQDPPAISLNNVEWLIVDETDKLFEEGIRGFRE
QLEEITKACVNTNLRRGMFSATNTPAVSKWCRRNMKGLVTVTVGQRNAAADLVDQKLLFV
GSERGKLVEFRNIIQKGISPPVLVFVQSKERAQELFNELIYDGINVDVIHADRTMTQRDN
TVRCFREGKIWVLICTELMGRGIDFKGVNLVINYDFPPSAISYIHRIGRTGRAGHKGKAI
TFFTQQDTANLRSIAAVLRASGCDVPDYMLAMKKHSKKERRKLERTAPTREKILTVPTYK
RRKRKSCIEKKSEEKEMENEI
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcacgatcttttcaaaaagcttgctgccggtgttaaatttgatataaatcgc
tttcgaaaagatgcagaaagatttcagatggtgaaaccaagtaaaaatgatataaataat
acagttaaaaaaattaaagacgaaatattacagcctacagaaagcaaagcaaaaagaaaa
tataaagatcagaatgaagatgttgatgaaataacattgctggatggactatcggtacca
aaagatggaggcgtttcagttaagaaacgtaaaaaagtcgcaactgctgacaagttgttg
aaactagaacaggagaagataaatcatctgagaaatatgaatcgtatttcagtcacaggc
agtcatgtacctaaattaatattagaatttgaagaattaaaaacaaactaccaagtgtca
gaaagtttgataaataatatgaaaaatagtgggtatatgtatccaacaccaatacaaatg
caagcaatgccaattatgctagaggatagacagatactggcttgtgctccaacaggatca
ggaaaaactgcagcatttttgttaccaattattcatagtttacgaggaccacaaaagaaa
ggctttcgtgctgttattctaaatcctacaagggagttggccaaacagacttatagggaa
tgcttaaaattgagtgatggctgtgattttagaattcacataattagtaaagtaaatcag
gctcttactaaatatggaccttcaagctcgcaaaagtttgatattttaattactacacca
aagcgattagtattccttttaaatcaagatcctccagctatttcattaaataatgttgaa
tggttgattgtggatgaaaccgataaacttttcgaggaaggaatacgtggttttagggag
caattagaagaaattacaaaggcttgcgttaatacaaatttacgtcgcggtatgttcagt
gcaacaaatactccagcagtgtcaaaatggtgccgtcgtaacatgaagggtcttgtaaca
gtaacagttgggcaaagaaatgcagctgcagatttggtagatcagaagcttctttttgtt
ggtagtgaaagaggcaaattagtggagtttagaaacattattcagaagggtatatcacca
ccggtcttggtatttgtacaaagcaaagagagagctcaagaactttttaacgagcttata
tatgacggaattaatgtggacgttattcacgctgatagaacaatgacacagcgagacaat
actgtgcgttgctttagagagggaaagatttgggttttgatctgcacagaattaatgggc
agaggtatagattttaaaggcgtaaatctcgttataaattatgattttcccccgtccgcc
atctcttacattcacagaataggtcgtaccggtcgcgccggtcacaaaggaaaagcaata
acatttttcactcaacaggatacagcaaatttacgaagtattgcggcggttctacgagct
tctggatgcgacgtacccgattacatgctggctatgaagaagcacagtaagaaggaacga
cgtaagcttgagcgtacagcgcccacgcgtgaaaaaatattaacagtgcctacatataaa
cgacgtaaacgaaagtcatgcattgaaaagaagtcagaggaaaaggaaatggaaaacgaa
atataa
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