Cyphomyrmex costatus: 108777968
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Entry
108777968 CDS
T11118
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108777968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108777968
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108777968
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108777968
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
108777968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
AAA_14
Motif
Other DBs
NCBI-GeneID:
108777968
NCBI-ProteinID:
XP_018400496
LinkDB
All DBs
Position
Unknown
AA seq
1072 aa
AA seq
DB search
MAEANNNDSGVSSLADNTIGSMLSDELPNDLQEIVSVQAEDSILQEVSEHIKHNTKSNNQ
HRIQDDDVKSNIEENIEVNSKKNHKAELQKQVEIGEITPFEAVFKQSAIELKEGSATKSS
QLSDLEKYFKQQAALAEQKRKLKNVSKASDKNTVSIKKKAKLLDTDAKTNKKCQKSKHEN
SQDNTMQSTDKADSNEANGIDDNSSESEYIPSDNEVDSDMEDKASSKKRKSSVKSGCIRI
KRTRDDGDHQLFKQRIETNTYPKDEAMHKIDTLFKVPQCIWEKLYRYQKVAVKWLWELHS
RKLGGLLGDEMGLGKTVEIIAFLAGLDCSELLSYNGRYRGLGPTLVVCPATLMEQWVKHF
HEWWPFFRVVVLHHSSGYNGDPESLIESLQTGGILITSYNGVLRHKDLLVHSQWHYVILD
EGHKIRNPQAKVSRAVKRFATSHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPVFLEH
CAIPITRGGYANATPLQEATALQIATMLKNTITPYMLRRTKTDVKHHLTLPEKNEQVLFC
SLTDEQKKLYKKYLCSDDVSFILHERNDHGSGRYRARFLIALSALRKICNHPDLFLYTRE
QDSDEDIDLFEEQIEKFGYYKRAGKMIVVRSLLKIWQKQGHRVLLFTQGRQMMHILESLL
QREKYTYLRMDGTTAMSQRQQTIHKFNNDTSYFVFLLTTRVGGLGVNLTGANRVVIYDPD
WNPATDAQAKERAWRIGQNKQVTIYRLITAGTIEEKIYHRQIFKLLLSNKVLDEPRQRQL
FKSTDLVELFNLNEPIAGEFSESDRLFRESRLTPSGFSLSKIEEMKKLASVLSKKISAKT
KLMCVENKDTNNSTCKEECDKQNDNSKRLDALVTKNDVCEDQNLPSDHYNTQKSSSKCND
DFDMNSDANIERNIEYSNIENENTFKKDNCEQNVVSVKSLDNHSVEKKKKFVLNDDKVTS
SSTHKRKKHRKDSSNTNVSAIFEGERVSCLIGRRLGRSIEREESASTTDDDYVLRKLFAK
STVSSAFQHEAVLSNASHNSDNENTMQRFARESAQESMDFVHQSGKHCWRPA
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggcaaataataacgacagtggtgtgtcgagtcttgctgacaacacgatagga
agtatgctaagcgacgagcttccaaatgatttgcaagagatagtgtcagttcaagcagaa
gacagcattttgcaagaagtatcagaacatatcaaacacaatacaaaatcaaacaatcaa
catagaatacaagatgatgatgtcaaatcaaatattgaagaaaatatcgaagttaatagc
aaaaagaatcataaggcagaattgcaaaagcaagtcgagattggagaaattactccattt
gaagcagtatttaaacagtcagctatagagctaaaggaaggaagtgctactaaaagttct
caattatctgatcttgagaagtatttcaaacaacaagctgctcttgctgaacaaaaaagg
aaattaaagaatgtatctaaagcatctgacaaaaatacagtgtcaataaaaaaaaaagca
aaattacttgatactgatgcaaaaacgaataaaaaatgtcaaaaatctaaacatgagaac
agccaagacaacactatgcaaagtacagacaaggcagattccaatgaagcaaatgggatt
gatgacaacagttcagaaagcgaatatattcccagtgataacgaagtggattccgatatg
gaggataaggcatcgtctaaaaaaagaaaatcttcagttaaatccgggtgcatccgcata
aaaagaactcgagatgatggagatcatcaactatttaagcaaagaatagaaacgaacact
tatcctaaagatgaagcaatgcacaaaattgatactctctttaaagtgccacaatgtatt
tgggaaaaattgtacagatatcaaaaagtcgcagttaagtggctctgggaattgcacagt
cgtaaattaggcggcctgttgggtgatgagatgggattaggaaaaactgtggagattatt
gcatttctcgcgggtttggattgtagcgaattgctctcttacaacggaagatacagagga
ttaggcccgactctagttgtgtgtcctgctactttaatggagcaatgggtgaagcatttt
catgaatggtggcctttcttcagagtcgttgtgcttcatcattctagtggctataatggt
gatccagaaagtttgatagaatctctacaaactggcggaatactcattacttcttacaac
ggagttcttagacacaaagatttgcttgtgcatagtcaatggcattatgttattttagac
gaaggccataagattcgtaatccacaagcaaaggtaagccgagcggtgaagcgatttgca
acatcgcatcgcttgctgctgactggtagtccaatgcagaattccctgaaggaattgtgg
tccttgtttgactttattttacctggtaaattgggcacactacctgtatttctagagcat
tgtgctattcctataacacgcggtggttacgcaaatgccacgccgttgcaggaagcaaca
gctctccaaatagccactatgctgaaaaacactattacaccatatatgctccgaagaaca
aagactgatgtgaagcatcatctcactctgccggagaaaaatgagcaggtattattttgc
agcttaacggatgagcaaaagaagttgtataaaaaatatctatgctccgatgatgtttct
tttattcttcacgagagaaatgatcatggcagcggaagatatagggcgaggtttctcatt
gctttatcagcattgagaaaaatatgtaaccatccagatctgtttttgtacaccagagaa
caagactccgatgaagatattgatttgttcgaagaacaaatagagaaattcggatattat
aaacgtgctggaaaaatgatagtagttcgatctcttctgaaaatctggcagaagcaaggt
catagagtgctactttttactcagggaagacagatgatgcacattttagagtctcttttg
caacgtgaaaaatacacttacttgagaatggatggaacaacagcaatgtctcaacggcag
caaacgattcacaaatttaataatgacacgtcatattttgtattcctcctaacaacgcgc
gtaggaggcctgggagtaaatctgaccggtgcgaatcgagtggttatttatgatcccgat
tggaatccagccacagatgctcaagcgaaggaacgcgcgtggagaataggccagaataag
caagtcactatctatagattaattactgctggcactattgaggaaaagatataccataga
cagatcttcaagctgctactttcgaataaagttcttgatgagccacgtcaacgtcaacta
tttaaatcgacggatctggtggaattatttaatctgaatgagccgatagccggcgagttt
tccgaatcggatcgcttatttagagaatctagattgacacccagtggcttttctctgagt
aaaatcgaggagatgaaaaagttagcgtcggttctcagtaaaaaaataagcgctaaaaca
aaattgatgtgtgttgaaaataaagatacaaataatagcacttgcaaagaagaatgtgat
aaacagaatgataattcaaaacgcttagatgctcttgtcacgaaaaatgatgtgtgtgag
gaccaaaacttgccttccgatcattataatacacaaaagtcttcgagcaaatgtaatgat
gattttgatatgaattctgatgcaaatattgaaagaaatatagaatatagtaatatagaa
aatgaaaatacatttaagaaggacaattgtgaacagaatgtagtttcagtgaaatcttta
gataatcattctgtggaaaagaagaaaaaatttgtattaaatgacgacaaagtcacgtca
tcgtctactcataaacgaaaaaaacatagaaaagattcgagcaatacaaatgtttctgcg
atatttgagggagaacgtgtctcttgtctaatcggtcgtcgcctgggacgttctattgaa
agagaagagtcagcttcaaccacagacgatgactatgtgttaaggaagctattcgccaaa
tcaactgttagttcggcctttcaacatgaagcagtattatcaaatgcaagtcataatagt
gataatgaaaatacaatgcaacgttttgcacgtgaatctgcgcaagaaagcatggacttt
gttcatcaatcagggaaacattgttggagaccagcataa
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