KEGG   Cyphomyrmex costatus: 108777985
Entry
108777985         CDS       T11118                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108777985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccoa03041]
    108777985
Spliceosome [BR:ccoa03041]
 Complex B
  Other components
   Prp19-related factors
    108777985
 Complex C
    108777985
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 RRM_occluded zf_CCCH_4 Torus RRM_YTH1 zf-CCCH_2 zf-CCCH zf-CCCH_4 Nup35_RRM_2 zf-CCCH_10 zf-CCCH_12 RRM_3 DUF5092 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 108777985
NCBI-ProteinID: XP_018400522
LinkDB
Position
Unknown
AA seq 414 aa
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKIDPTTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYIGNLG
DILTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRNAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTVSAAEATREILEPVPGLPGALPPPPPPPESMGSNFFNLQTTPGMIPPMMI
PPPPVAPQFMFPPQIATAAAAPIFPPGTTPIHYPSQDPSRMGASQGIGKPWPEE
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggccacatcaaagacgactaatacatataatagacaaaattgggaagatgcggaattc
ccaatattgtgtcagacgtgtttaggagacaatccatatattcgtatgaccaaggagaaa
tatggaaaggaatgcaagatatgtatgcgaccatttacagtatttagatggtgtccagga
gctaggatgagatttaagaaaactgaagtctgtcagacgtgcagtcgattgaagaatgtc
tgccaaacatgtttattggatttggaatatggcttgcctattcaagttcgcgatgctgct
ttgaagattaaggatgatttaccacgttcagatgtaaataaggaatactatgtacaaaac
atagacaatgaaattggaaaaattgatccaacaacacctgctggtgctgttggtaagtct
gctgcagctagtgatctgttgatgaaactggctaggacgagtccttattataagagaaac
aggccacacatttgctcattttgggtaaagggtgaatgtaaaagaggcgaggaatgtcct
tatcgacatgaaaaaccaacagatcctgatgacccattggcagatcagaacataaaggat
cgttattatggtgtcaatgatccagtggcagataaactaatgcgcagggcagcagctatg
cctaagctagaccctcctgaggataaatccattacaacattatatattggtaacctaggt
gacatattaacagagaaacagctgcgtgatcatttttatcaatacggtgagatccgctca
gtgaccatggtaccgcgtcagcaatgtgctttcattcaatatacacagagaaatgctgct
gaagcagcagcagagagaacttttaataaactgatattgggtggaagacggctcactata
aaatggggccgttcacagggaaggcaaacagtgtctgcagcagaagcaacgagagagatc
ctcgaacctgtcccaggattacctggcgcgttaccaccaccgccaccaccaccagaaagc
atgggtagtaactttttcaatctgcaaactactcctggtatgataccaccaatgatgatt
ccaccaccaccagttgctcctcaatttatgtttcctccgcaaatagcaactgctgctgct
gcaccaatttttcctccaggaactacccccattcattatccaagtcaagatccgtccagg
atgggtgcatcacagggtataggcaaaccttggccggaggaataa

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