Cyphomyrmex costatus: 108777985
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Entry
108777985 CDS
T11118
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108777985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccoa03041
]
108777985
Spliceosome [BR:
ccoa03041
]
Complex B
Other components
Prp19-related factors
108777985
Complex C
108777985
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_occluded
zf_CCCH_4
Torus
RRM_YTH1
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
zf-CCCH_10
zf-CCCH_12
RRM_3
DUF5092
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
108777985
NCBI-ProteinID:
XP_018400522
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MATSKTTNTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICMRPFTVFRWCPG
ARMRFKKTEVCQTCSRLKNVCQTCLLDLEYGLPIQVRDAALKIKDDLPRSDVNKEYYVQN
IDNEIGKIDPTTPAGAVGKSAAASDLLMKLARTSPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGVNDPVADKLMRRAAAMPKLDPPEDKSITTLYIGNLG
DILTEKQLRDHFYQYGEIRSVTMVPRQQCAFIQYTQRNAAEAAAERTFNKLILGGRRLTI
KWGRSQGRQTVSAAEATREILEPVPGLPGALPPPPPPPESMGSNFFNLQTTPGMIPPMMI
PPPPVAPQFMFPPQIATAAAAPIFPPGTTPIHYPSQDPSRMGASQGIGKPWPEE
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggccacatcaaagacgactaatacatataatagacaaaattgggaagatgcggaattc
ccaatattgtgtcagacgtgtttaggagacaatccatatattcgtatgaccaaggagaaa
tatggaaaggaatgcaagatatgtatgcgaccatttacagtatttagatggtgtccagga
gctaggatgagatttaagaaaactgaagtctgtcagacgtgcagtcgattgaagaatgtc
tgccaaacatgtttattggatttggaatatggcttgcctattcaagttcgcgatgctgct
ttgaagattaaggatgatttaccacgttcagatgtaaataaggaatactatgtacaaaac
atagacaatgaaattggaaaaattgatccaacaacacctgctggtgctgttggtaagtct
gctgcagctagtgatctgttgatgaaactggctaggacgagtccttattataagagaaac
aggccacacatttgctcattttgggtaaagggtgaatgtaaaagaggcgaggaatgtcct
tatcgacatgaaaaaccaacagatcctgatgacccattggcagatcagaacataaaggat
cgttattatggtgtcaatgatccagtggcagataaactaatgcgcagggcagcagctatg
cctaagctagaccctcctgaggataaatccattacaacattatatattggtaacctaggt
gacatattaacagagaaacagctgcgtgatcatttttatcaatacggtgagatccgctca
gtgaccatggtaccgcgtcagcaatgtgctttcattcaatatacacagagaaatgctgct
gaagcagcagcagagagaacttttaataaactgatattgggtggaagacggctcactata
aaatggggccgttcacagggaaggcaaacagtgtctgcagcagaagcaacgagagagatc
ctcgaacctgtcccaggattacctggcgcgttaccaccaccgccaccaccaccagaaagc
atgggtagtaactttttcaatctgcaaactactcctggtatgataccaccaatgatgatt
ccaccaccaccagttgctcctcaatttatgtttcctccgcaaatagcaactgctgctgct
gcaccaatttttcctccaggaactacccccattcattatccaagtcaagatccgtccagg
atgggtgcatcacagggtataggcaaaccttggccggaggaataa
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