Cyphomyrmex costatus: 108778110 Help Entry 108778110         CDS       T11118                                  Name (RefSeq) symplekin   KO K06100   symplekin Organism ccoa  Cyphomyrmex costatus Pathway ccoa03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ccoa00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     108778110  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ccoa03021]     108778110    03019 Messenger RNA biogenesis [BR:ccoa03019]     108778110 Transcription machinery [BR:ccoa03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      108778110 Messenger RNA biogenesis [BR:ccoa03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      108778110     U7-dependent histone pre-mRNA processing factors      108778110 SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Atrophin-1 SecD-TM1 Motif Other DBs NCBI-GeneID:  108778110 NCBI-ProteinID:  XP_018400711 LinkDB All DBs Position Unknown AA seq 1107 aa AA seqDB search MDPRLHRRSEAEKGPNDLIVEWLNEASISLVEETKVTNICKIQELLLNKEPHLLEHYLND ILQFSIDRNSEVRKTITGFIEESGIKYPEVIPRTVQILLRLASDETSVVAKRALRASGRI LRAALKWIASASIVTTDMELAWTHLSALKVQIINMIDSDNDGIRTQAVKFLEGVVLIQTY PDPDNPKKPDDFSLEDIPLTLKIARRRKLEEEANHVMDLLIKFHGSPHVSSVNLMTCMGS LALIAKMRPQFMSNVIQALQRLQHDLPPTLSDSQVTSVQKQLKLTLLGLMKHPASIEYAL VIAKQLTQLGAKEQDIIKAYPKPEDVRRIKKRQQEIAAATAAKRVKVEVITDEAEVASVP TPKLPDLIELSESFIAERLSVEIATDLVMDSMAWVPDTMTTIFQREYQPTATTDINIQRQ TIAKLLATQIKQTKAKKNKRDKEEDAVMEDLIKNPTISVAEAKRERKREKDREKEKEAKA SLEAHEKSLAKTRNRMKALKLAEVTKPLPKETKERMLLMAVNRILLSEKTAVFGGVAAVR SKILTTLAATFNPYIKEVVLRYITDDMRNRLDLALGWLYEEYALLQGFQRRTTLCTKPQE APHQAYNFLLCTLVSAIDLIQGKDRDTLLSRLYLEAPLITEDAVEALKMVSSDETRGLAP LQLLKEMVVRRPTKQLVFLNVLLCHTGHENNTIREAAIQLVCQLYSRAELSKLIEEYAVL YLGFLRLHNPPEIVFGQDRGRPQIESLWSESTTRACLGLYLALLSEHQDLIHELARVYTS MGADVKRIVLRLVEGPVRSLGMGSPQLLALVENCPKGSETLVTRIIHILTEKSAPSAELV ARVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGTHNNDSG VPHTSPITPAELLIALHNIDSSKAELKTVIKATSLCFAEKQAYTQETVAVVMQHLMEMTP LPTLLMRTVIQSLTLYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQPQSFAVI LQLPPTQLAEALRMANNLRAPLLAHVEAFADNQKAHIPQSIMDVIQGKVPCDMLDEFDIA PRGDYSNDQKPDTMEIDLSEPAPPGLD NT seq 3324 nt NT seq  +upstreamnt  +downstreamnt atggatccacgtttgcatagaagatccgaagctgaaaaaggaccgaacgatttgattgtt gagtggttaaatgaggcttctataagccttgttgaggaaactaaagtcactaacatatgt aaaatacaagaacttttgttgaacaaggagccacatctgttagagcattatttaaatgac attctgcaattctcaatagatagaaattcagaagttagaaagacaattacaggatttatt gaagaatctggaataaagtatccagaagtaattcctcgtacagttcaaatacttcttaga ttagcatccgatgaaacatcagttgtggctaaacgtgctcttagagccagtggtagaatt ctcagagctgctctaaagtggattgctagtgcttctattgttacaacagacatggaatta gcatggacacatctaagtgctcttaaagttcaaattatcaatatgattgacagcgataat gatggaataagaacacaagctgtaaagtttcttgagggcgttgttttaatacaaacatat ccagatcctgataatccaaagaagcctgatgatttttctcttgaggatattccactaaca ttgaagatagctcgtagacgaaaattggaggaagaagcaaatcatgttatggatttgctg attaaatttcatggatctccacatgttagcagtgtcaatttaatgacatgtatgggatct ttggcattaattgccaaaatgaggccacaatttatgtcaaatgtaattcaagcattacaa aggttacaacatgatttaccaccgacactgtctgattctcaagtaaccagtgtacaaaag caattaaaactcacacttcttggactaatgaaacaccctgcaagtatagagtatgcttta gttattgctaaacaattgactcaacttggagcgaaagaacaggatattattaaagcttat ccaaaaccagaagatgtccgtcggatcaaaaaacgtcaacaagagatagcagctgctact gctgcaaaacgagtaaaagttgaagtgataacggatgaagcagaagtggcttctgttcct acgcctaaattaccagacttaattgaactttctgaaagttttattgccgagagactcagt gtagaaattgcgacagatttggtgatggatagtatggcatgggttccggatactatgact acaatttttcaaagggaatatcaacccactgcaactactgatattaatatacaacgtcaa accattgctaaacttctagcaacacaaattaaacaaactaaagcgaaaaagaacaaaaga gataaggaagaagatgccgtaatggaagacttaattaaaaatcccacaattagcgtagcc gaggcgaaacgggagcgtaaacgtgaaaaagatcgggaaaaagagaaagaagcaaaagcg tcattagaggctcatgagaaatctcttgcaaaaaccagaaatcgtatgaaagcgttaaaa ttagccgaagtgaccaaaccacttccaaaggaaactaaagaacgaatgttactgatggca gtcaataggatattactttcagaaaagactgcagtttttggtggtgtagctgctgtaaga tccaagattctgactacgctagcagccacttttaatccttacattaaagaagttgtctta cgttatattactgatgacatgcgaaatcgattagatttagcgttaggttggctatatgaa gaatatgcattgttacaaggatttcaaaggcggactacgttatgtacaaaaccacaagaa gctccacatcaggcatataatttcttattgtgtactttagtttcagctattgatttgata cagggtaaagatcgtgatactttgttatccagactttatttggaagcaccgttaataaca gaagatgctgtagaggctttaaaaatggtatcatctgatgaaactagaggtcttgcacca ttgcagcttttaaaagaaatggtagtgcgtagaccaaccaaacaattggtatttttaaat gtcttattatgccatactggacatgaaaacaatacaatacgagaagctgcaatacaatta gtttgtcagttgtacagccgagcagaattaagtaaactgattgaggaatacgcagtacta tatttaggctttttacgtcttcataatccaccggaaattgtttttggacaagatagaggc agaccgcaaattgagagtctatggagcgaatcaactacacgtgcctgcctaggattgtat cttgctcttctcagtgaacatcaagatctgattcacgaattagctagagtatatacatca atgggagcagatgtaaaacgtattgtattaagactggtagaagggccagtgagatcttta ggtatgggtagtccacaactcctcgcacttgttgaaaattgtccaaaaggatctgaaact ttagttacaaggattatacatattcttacagagaagtctgccccaagcgcagagttagta gccagagtacgcgagttatatcagactagagtttctgatgtcagatttttaataccggtc ctgaatggactcacaaagaaagaagtaattgccgcattgcctaaattaatcaaattaaat ccaattgtcgtaaaagaggtatttaacaggttactcggaacacataataatgacagtgga gttcctcatacatcgcctattacgcctgcggaattattgatagctttacataatatagat tcaagcaaagctgaattaaagaccgttattaaagcaacatctctttgttttgctgagaaa caagcatacacacaagaaacggtcgccgttgtaatgcaacatcttatggaaatgacacct ttaccgacattattaatgcgtacagttatacaaagcttaactctttatcccaggttaagt ggatttgttatgaatatacttcaacgactgattctaaagcaagtgtggaaacaaccgaaa gtgtgggaaggcttcgtgaagtgctgcgaacgcacgcagccgcaaagtttcgccgttatt ttgcaattaccaccgacacaattagcagaggctcttcggatggcaaataatttacgtgct cctttgcttgcccatgttgaagcttttgccgataatcagaaagcacacattccacaatca ataatggatgtcatacagggtaaagtgccctgtgacatgctcgatgagtttgatattgca ccacgtggtgattattcgaatgatcaaaaaccagatacaatggaaattgatctttcggaa ccagcccctcccggtttagattag

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