Cyphomyrmex costatus: 108778158
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Entry
108778158 CDS
T11118
Name
(RefSeq) integrator complex subunit 6
KO
K13143
integrator complex subunit 6
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccoa03041
]
108778158
Spliceosome [BR:
ccoa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
108778158
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_INTS6
INT_SG_DDX_CT_C
VWA_2
VWA
VWA_4
Fer2_3
Motif
Other DBs
NCBI-GeneID:
108778158
NCBI-ProteinID:
XP_018400762
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MTIIVFLIDTSASMNQRAYLGGRPTLLDVAKSAVETFVKVRQRSPESRGDRYMLLTFEDP
PQNIKAGWKENLATFMNELKNLQCVGLTTLGAALKHALDVLNINRMQTGIDTYGQGRCPF
YLEPSVIVVITDGGKYTTSSGVNQDFTLPMHAPIPGSELTKEPFRWDQRLFSLVLRLSGT
PAVERDIGLVASDASPIDAMCEVTGGRSYCITSFRMMIQCIDSLVQKVQSGVVINFEKIG
PDPPPLTNEAPQHQDEEENEDDGNATNGPRTQYSNTLAPGNTAWYSCRRLIYVPRSAQKG
FAVGFWPIPESFWPDLSASSLPPRSAHPNVKFTCTSQEPMVIENLPFDKYELEPSPLTQY
ILARKQPTTCWQVFVANSYKSSEVGHPFGYLKASTNLTCVNLFVMPYNYPVLLPLLEELF
KVHRQKPTPEWRAQFQGYIRTMPTYYAASLRRALTRMGASTPLAQTLIPDNMDNSLSYSV
LNYLKRLKNQAKIEFDRLCNEVISKQVAASNLTKNLSNCTTSVVTEGVRVVPKSPLKKDL
VSHPLLQDKFTSLRDQLNEFGGFVVGLVKNQQQQRGAHSYRNAFDVPRKSLLDQVVRMRA
NFLQPGLLHTKLLDDDYVHSMPLAQMGNYQEYLKRMTPPLREIESVPVRQHMFGNPFKID
KRMMVDEADIDIVGATASTSKGGLKRTLPQSDNVGSSSPRPPPNKRKPGPIPKDVIVRRP
SYTNTPPSSPIPWMMEDTKSQVMVTATVAAAATTPVADTSTPPILSCLPNVSPGHASLPC
SSASEKLVNGLAEMPIIPVFEPIPVEHVNNHMDTPPVLTPIVNNVDAISKGDVKSERTDN
VKNECNRLPVNDCIENNMRVDSAAEERLTNHVEEKREPKSEREKKLTKKELEDIRRHNLN
IRELVYKEVRRRGKNYATLFSHLHQVQGTLDIRLAFIKDIVKESLRFKRRNLASLLEEYL
KTIQEDGCAINHKLNHNGATKISC
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgaccataatagtatttttgatcgacacgtcggcctccatgaatcagagggcttatttg
ggtgggcgacccacgctcttggacgtagccaagagcgccgtggaaaccttcgtcaaggta
cgacagagatcgccggagagccgtggggatcgttacatgctcctgaccttcgaagatcca
cctcagaacatcaaggcaggatggaaggagaacttggcaaccttcatgaacgaactgaaa
aacttacaatgcgtcggtttgacgacgttaggtgccgcgttgaaacacgcgttagacgta
ctgaacataaaccgtatgcagactggtatagatacttatggccaaggaagatgcccgttt
tatttagaaccatccgttatagttgttataacagacggaggaaaatatacgactagcagc
ggagtcaaccaagattttacattaccaatgcatgccccgatacctggatctgaactgacg
aaagagccatttagatgggaccaaagattattctctttggtattgcgtttatcaggaaca
ccagccgtcgaacgagacattggcttagtggcaagtgacgcgtcaccgatagatgcaatg
tgtgaagtgaccggaggtcgttcgtattgcatcacgtcattcaggatgatgatacaatgc
atagattctctggtgcagaaagttcaatcaggtgtagtgataaatttcgagaaaatcggt
cctgacccaccaccgttaaccaatgaagccccacaacatcaggacgaggaggaaaatgag
gacgatggtaacgcaacgaacggaccacgcactcagtattccaatacgttggcgccggga
aacacggcttggtattcctgcagacgcttaatttacgtcccgcggtcagctcagaaagga
ttcgcggtaggtttttggccgatccccgaaagcttctggccagatcttagcgccagctcg
ttaccgccacgatcggcgcatccgaatgtgaaatttacgtgcaccagtcaggagccaatg
gtgatcgagaacttaccctttgacaagtacgaactagaaccgagtcctctgacacagtac
atcctagcgaggaaacagccgacaacatgttggcaagtgtttgttgctaattcgtataag
tcgagtgaagtgggccatccgttcggttacttgaaagctagtacaaacttaacttgtgta
aatctcttcgtcatgccttacaactatcccgtgctgttaccactgttagaagagctcttc
aaggtacataggcaaaaaccgacacctgaatggagggcgcaattccagggttatataagg
accatgcctacctattacgccgcctcgttgagaagggcattaactagaatgggtgcgtct
acacctctagcacaaaccttgatacccgataacatggataattctttatcgtatagtgtt
ttaaattatttaaaacggttgaaaaatcaagctaagatcgaatttgatcggctgtgtaac
gaagtcatttccaagcaagtcgctgcttcgaatcttacgaagaatttatctaactgtacc
acgagtgtggtgacggaaggagtgagagttgtaccgaagtcaccgttaaaaaaagatttg
gtgtcccatcctttgttacaagacaagttcacgagcctccgcgatcaactgaacgagttc
ggaggttttgtcgtcgggttagtgaaaaatcaacaacagcaacgtggcgcgcacagttat
aggaacgcttttgatgtgccgagaaaatccttgctcgatcaagttgtgcggatgcgcgca
aatttcctacaacctggcttgttgcatacaaaattactcgatgatgattacgttcattcg
atgcctttagcccaaatgggaaattatcaggaatacttgaaacgtatgactccaccgttg
agagagatcgaaagtgtaccagttagacagcatatgttcggtaatcccttcaaaatagac
aaaaggatgatggtagatgaggcagatattgacatagtcggtgcaacagcctcaacatcg
aaaggtggtcttaagcgcaccttaccgcaatcggataacgtaggctcatcctccccgagg
ccgcctcccaacaagaggaagcctggacccataccgaaagacgtgatcgttcgacgacct
tcatatactaatactccaccgagttccccgattccttggatgatggaggacacgaagagt
caagtaatggtgacagcaacagtagcagcagcagcaacaacaccagtcgccgatacgagc
actccaccgatcttgtcttgtttacccaatgtatcgccgggtcacgcgtcgttaccgtgt
tcaagcgcgtccgaaaagttggtaaacggtctcgcggaaatgccaattataccagttttc
gagccgattccagtggaacacgttaacaatcatatggacacgccgcccgttctgacgccg
atagttaataatgtcgacgcaatatcgaagggtgatgttaaaagtgaacgaacagataat
gtgaagaacgagtgtaatcggttaccagttaatgattgtattgagaataatatgcgagtg
gacagtgctgctgaggagagactgacgaatcatgtagaggagaagcgtgaaccgaagtcc
gagagagagaagaagctgacgaagaaggaattggaagacatcaggcgacacaatctgaat
atccgggaactcgtttacaaggaagtgcgaagaagagggaaaaattacgcaacactgttc
tcacacttacatcaagttcaggggactctagatatacggcttgcgtttataaaagatata
gtaaaagaatcattacgctttaaacgacgtaacttggcgtcactgttagaagaatatctt
aaaaccattcaagaggacggttgcgctataaatcacaagctgaatcacaatggtgccacg
aagataagttgttaa
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