KEGG   Cyphomyrmex costatus: 108778318
Entry
108778318         CDS       T11118                                 
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
ccoa  Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccoa03009]
    108778318
Ribosome biogenesis [BR:ccoa03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    108778318
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML NBCH_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_DCAF4 PROPPIN Beta-prop_WDR75_2nd Lactonase Cytochrom_D1 Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N WD40_like WD_LRWD1 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 108778318
NCBI-ProteinID: XP_018400957
LinkDB
Position
Unknown
AA seq 465 aa
MSFFIRSGNRGDGTQKRKLNGHFNKKSTIQSKSKKSKKSKLDDNESIASTDEEFAEENLG
NEAQSETEEEEETAQEKRLRLAKKYLQEIEEEEKDRAEFEEGAVAQRLREEYLEEKGRLK
KTIAINYVGHNELITLRCKEHKSSITCICLSSDGNILYSGSKDGSLVKWSVKDKKKLKAI
RGNRGKQNPGMKSIQCLAISTDGRFLVVGESGCKDIKVFSGDTINHIKDLKGHRGLVSGL
VFRKNTHTLYSASEDKSVKVWNLDDMAYVESLFGHQNAITSIDALSRERAITSGGYDGTV
RIWKIVEESQLIFNASSVGSSIDAVKLINEENFFTGGDDGQLCLWGCLKKKPLCSISQAH
GIDETNGQPMWISSIATLLNTDLVASGSRNGTIKLWHCSENFRSLNLLFEVKLTGFINAL
AFTPDGNHLIAGIGKEHRNGSWWQISEAMNSIVIIPLVHKQKTNK
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgtcgttttttataagaagtggtaaccgaggagatggtacacagaaacgtaaactcaat
ggccactttaataagaaatctacaattcagtcaaaatcaaagaaatcaaagaagtccaaa
cttgatgataatgaaagtattgccagtacggatgaagagtttgcagaagaaaatttagga
aatgaagcacagagtgaaactgaggaagaagaggaaactgcacaagaaaaacgtttgagg
cttgcaaagaaatatcttcaagaaattgaagaagaagaaaaagatagagcagaatttgaa
gaaggtgcggttgcgcagagattacgtgaagaatatttagaggaaaaaggtcgattaaaa
aaaactatagcgattaattatgttggccacaatgaacttataacattgaggtgtaaagaa
cataaatcgtccattacctgtatttgcctttcaagtgatggcaatatattatattcagga
tctaaggatggtagtttagtcaaatggtcagtaaaggataaaaagaaattgaaagccatt
agaggaaacagaggaaagcagaatcctggaatgaaatctatacaatgtttggcgattagc
acagatggaaggtttcttgtagtaggagaaagtggatgtaaagacataaaagtgttctct
ggtgatactattaaccatataaaggatctgaaaggtcacagaggtttagtatctggatta
gtattccgtaaaaatactcacacgttatactctgcttccgaagataagagcgtgaaagtt
tggaatctagacgatatggcttacgttgaatctttattcgggcatcagaacgctatcacc
tctattgacgcgctttcacgagagcgcgctatcacaagcggtggttacgacggaactgtt
aggatatggaaaatagtcgaagaatcacagttaatatttaacgctagtagcgtcggcagt
agcattgacgcagttaagctcatcaacgaggagaatttttttaccggtggagacgacgga
caactttgcctttggggatgtttgaagaagaaaccgctgtgttcaatatcacaggcacac
ggaatagacgaaaccaacggtcaaccgatgtggatttcaagtattgccacactattgaat
acagatttagtagcgtcaggttcgcggaacggtacgataaaattatggcactgcagtgaa
aactttagatctttaaatttgttatttgaagttaaattgacgggtttcataaatgcgctc
gcatttactcctgatggaaatcaccttattgctggtataggtaaagaacatagaaatgga
agttggtggcaaatatctgaagcgatgaattccattgttattataccattagtgcataag
caaaagacaaataaataa

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