KEGG   Cyphomyrmex costatus: 108778320
Entry
108778320         CDS       T11118                                 
Name
(RefSeq) histone deacetylase Rpd3-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03082  ATP-dependent chromatin remodeling
ccoa03083  Polycomb repressive complex
ccoa04213  Longevity regulating pathway - multiple species
ccoa04330  Notch signaling pathway
ccoa04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108778320
   03083 Polycomb repressive complex
    108778320
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    108778320
   04350 TGF-beta signaling pathway
    108778320
 09150 Organismal Systems
  09149 Aging
   04213 Longevity regulating pathway - multiple species
    108778320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccoa03036]
    108778320
Enzymes [BR:ccoa01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     108778320
Chromosome and associated proteins [BR:ccoa03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     108778320
   HDAC complexes
    Sin3A-HDAC complex
     108778320
    BRAF-HDAC complex
     108778320
    REST complex
     108778320
    SHIP complex
     108778320
    MiDAC complex
     108778320
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     108778320
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    108778320
  Chromatin remodeling factors
   NuRD complex
    108778320
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 108778320
NCBI-ProteinID: XP_018400962
LinkDB
Position
Unknown
AA seq 495 aa
MAMQPFKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATA
EEMTKFHSDDYIRFLRSIRPDNMGEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAA
VKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGD
GVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDMGAGKGKYYAVNIPLRDGMDDESYESIF
VPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVRGHGKCVEFVKRYNLPFLMVGGG
GYTIRNVSRCWTYETSVALGCEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLDK
IKTRLFENLRMLPHAPGVQVQAIPEDGAVIEDSESEEKMNLDERLPQRDLDKRIQHENEY
SDSEDEGEGGRRDNRSYKGSTKRLRLEKGQEMDMRIMNINTKKEDDIKSDLRENEKDEKV
NFLNEEIRKEGGINI
NT seq 1488 nt   +upstreamnt  +downstreamnt
atggccatgcagccatttaagaaacgtgtctgttattactatgatagtgatatcggaaat
tattattatggtcaaggacatcctatgaagccacatcgtatacgcatgacgcataatcta
ctcttgaattatggtctttatagaaagatggaaatatatcgacctcataaagctacagca
gaagaaatgacaaaatttcatagtgatgactacatcagatttttgagatcaatacggcca
gataatatgggagaatacaataaacaaatgcaacgatttaatgtaggggaagactgtcct
gttttcgatggtttgtacgaattttgccaattatcagctggtggatctgtagctgctgct
gttaaactcaacaagcaagcctcagaaatttgtattaattggggtggtggcttacatcat
gcaaagaagagcgaagcttctggtttttgctatgtaaatgatattgtacttgggatcttg
gaactgctaaaatatcatcagagagttttgtatattgacattgatgttcatcatggcgac
ggagtagaggaagctttttatacaacagatagagtaatgacggtctcatttcataagtat
ggcgaatatttccctggaacgggagatcttcgtgatatgggagcaggaaagggaaagtac
tatgcggttaatatacctttaagagatggtatggatgatgaaagctacgaatcaatattt
gttcctatcatctctaaagtgatggagacatttcaaccttctgctgttgttttacagtgt
ggagcagactcactgacaggtgatcgattgggatgtttcaatttaactgtgagaggccat
ggtaaatgtgtagagtttgtgaagagatataatttacctttcttaatggtgggaggtggt
ggttatactatcagaaatgtatctagatgttggacatatgaaacatcagtggctctcgga
tgtgaaatcgctaatgaacttccatataacgattactttgaatattttggtcctgacttt
aaattgcatattagtccttcaaatatgacaaatcaaaatacttccgaatatctcgataaa
attaaaacaaggttgtttgaaaacttgagaatgctacctcatgcacccggcgtacaagtt
caggcaataccagaggatggtgctgttattgaagattcagaaagtgaagaaaagatgaat
cttgatgaaagactgcctcaacgtgatttagataagagaatacaacatgagaatgaatat
agtgatagtgaagatgaaggtgaaggtggacgaagagataacagatcatacaagggatct
acgaagcggctgcgtttagaaaaaggtcaagaaatggacatgcgtattatgaacattaat
acaaagaaagaagatgatataaaatcagacctgagagaaaatgaaaaggatgagaaagta
aatttcctgaatgaagaaataagaaaagagggcggaattaatatctga

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