KEGG   Cyphomyrmex costatus: 108778341
Entry
108778341         CDS       T11118                                 
Name
(RefSeq) protein trachealess
  KO
K09098  neuronal PAS domain-containing protein 1/3
Organism
ccoa  Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccoa03000]
    108778341
Transcription factors [BR:ccoa03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    108778341
SSDB
Motif
Pfam: PAS_3 PAS_11 bHLH_HIF1A PAS PAS_9 PAS_4 HLH
Other DBs
NCBI-GeneID: 108778341
NCBI-ProteinID: XP_018400998
LinkDB
Position
Unknown
AA seq 1014 aa
MHRGGGSAGGAAGGGIVGGAGGSHRALELEHPSAMPGAPGFHWGAMFAGHHAAAAAGMMQ
PPMSTGGEYVPTAAHHGPAHPAMPMDLHVHQGFPYFPTRYRDDALCWTDRKPSMDDVGNP
TSVNARFEERHYAFESILELRKEKSRDAARSRRGKENFEFYELAKMLPLPSAITSQLDKA
SIIRLTISYLKLRDFSSHGDPPWSRDGPPPSKSVKGANRVRSSSSTAIDHFEIHQGTHIL
QSLDGFAMAVAADGRFLYISETVSIYLGLSQVEMTGSSVFDYVHQQDHAEVAEQLGLGLA
SSTSTSAPHSSNSGLASPSSGASEEHGSSSTANPDVSSVMSLSATGLYKGYDRAFCVRMK
STLTKRGCHFKSSGYRVVLLLCRLRPQFIFSHARKSAPPLMGMVGLAIALPPPSVHEIRL
ETDMFVTRISFDFRIAHCEPKVSELLDYTADELTGKNLYTLCHGEDANRLRKSHIDLIHK
GQVLTHYYRLMNKSGGFTWLQTCATVVCNSKNAEEQNIICVNYVISGREYENLIMDCCQL
EDGVTGVKREDTAGNDPENGSPDADRGEGRSRGGPTNQHQDQQQSHRSPPEEREESHASE
SEKRGSRHHDNIAQLQQDSQTAAGNLGTLVVRLRGHKRKIHDDDSSSNEEEDEEESAVKE
SNGERTRALSPSATSTHSMSTTEQALCSTSPKSRRAEGSNRLDSAESTGTSVKDLEQAMS
KHLPGSSLNKSSSPAALHQPTDFSTDALLKQQQQRSTIQWIGAHHHLGHLSPQQSATAPL
PASALLRQLYAANRESVIRANVHGITSSGGTRAPTSAGIYYPGETAPNGPLPTPPGSEGS
STYGEHQFVLAAAHNQKGSNGTSCADAFTSLVSSYTSATAAGYSVDYHSAMTPPSSVSPR
DKQQQQQQQQQQQQQQQQQQQLHPVNVISSYEGSSAYADPVLRHQYEPAQPLPLKPQVYS
ATVHPSALDAAAAYASAGLTEQPQFYHHPASSAGFHIYHPSNKSATNGWYTSAS
NT seq 3045 nt   +upstreamnt  +downstreamnt
atgcaccgcggaggcggaagtgccggaggcgcagccgggggtggtatcgtcggtggtgcc
ggcggaagtcatcgtgccctcgaattggagcatccgtcggcgatgccaggtgcacctggt
ttccattggggggccatgttcgcgggtcaccacgcggccgctgccgcgggtatgatgcag
ccccccatgtctacgggtggtgagtacgtgccaaccgcggcgcatcatggtcccgctcat
cccgcaatgcccatggatctgcatgttcatcagggattcccctatttccctaccaggtat
cgagatgacgcgctctgttggacagacaggaaaccgtccatggacgacgtcggaaatcct
acctccgtcaacgcacgatttgaggagagacactacgctttcgaaagcatcttggaattg
cgcaaggagaagagccgagacgcggcgaggtcgcggcggggtaaagaaaactttgagttc
tacgagctcgcgaaaatgctaccattaccgtcagccatcacctcccagctggacaaggcc
tccataataaggctaacgatctcgtacctcaaactacgcgacttctccagtcacggcgat
ccgccgtggtcccgcgatggtccaccgcccagcaaatccgtcaaaggtgctaatcgagtc
agatcatcgtcatctacagcgatagatcatttcgaaattcatcaaggtacccacatatta
cagtccctggatggtttcgcgatggctgtcgcagctgatggcagattcctgtacatatct
gagaccgtttcgatatatctcggcctttcacaggtagagatgacggggtcaagcgttttt
gactacgtccatcagcaagatcacgctgaggtcgccgagcagctcggtctgggactcgcg
tcgtcgacaagcacctcggccccgcactcgtcgaattccggtctagcctcaccgagtagc
ggcgcgtcggaagagcacggttcttcctctactgcaaatcccgacgtgtcttcggtaatg
tcgctgtcggcgaccggactgtacaaagggtacgaccgggcattttgcgttagaatgaaa
tccactctgacgaagagagggtgtcatttcaagtcatctggttatcgggtcgtgctgttg
ctgtgtcgtttgaggccgcagtttatattcagtcatgcgaggaagtctgcgccgcctttg
atgggcatggttggactagctatcgcacttccaccgcccagtgtacatgaaattcgtctc
gaaaccgatatgttcgtcacacggatcagcttcgactttcggatagcacattgtgagcca
aaggtatctgaattgctggactacaccgccgacgaattgacggggaagaacctctatacg
ttgtgccacggcgaggacgcgaatcgtcttcggaaatctcacatagatctgatccataaa
ggacaagtgctgacgcattactatcggttgatgaacaagagtggcggattcacgtggcta
cagacgtgcgctaccgttgtgtgcaattcgaaaaatgccgaggagcaaaatatcatttgc
gtcaattatgtcattagcggccgagaatacgaaaatttaattatggactgctgtcagtta
gaggacggagtcaccggtgtcaaaagggaagatacggccgggaatgatccggagaatgga
tcgccggacgctgacagaggagagggtcgcagtcgaggcggcccaacaaatcaacatcag
gatcaacaacaatcgcatcggtcaccacccgaggaacgggaggagagccatgcatcggaa
agtgagaagcggggtagccgacatcacgacaacatagcccagttacaacaggattcgcag
acggcggccgggaatctcggcacgctcgtagtgagattacgagggcacaagcgaaaaatt
cacgacgacgacagtagctcgaacgaagaggaggatgaggaagagtctgcggtgaaagaa
tcgaatggtgaaagaactcgcgctctcagccctagcgcgacatccacgcactcgatgtcg
accactgagcaggcgctctgttcaaccagtccaaaatcacgtcgcgccgaggggagcaac
agactggacagtgccgagagcacaggaacctcggtgaaagatctggagcaggctatgtcg
aaacacctcccggggagctcgctgaataaatcgagctcgccggcagcgcttcatcagccg
acagatttcagcacggacgcgttactaaagcagcagcagcagcgaagtacgatacagtgg
atcggtgcgcatcatcatctgggacacttgagtccgcaacagtccgccactgctccttta
cctgcctcggcgctccttaggcaactttacgctgccaatcgggagagtgtgatacgtgcc
aatgtacacgggatcacgtctagcggcggtacgcgcgctcctacatcggccggtatctac
tatccgggcgaaactgcccctaatggacctctacccacgccgccaggatcggaaggctcc
agcacgtacggcgagcaccaatttgtgctcgctgctgctcacaatcaaaaaggatcgaac
ggcaccagctgcgccgacgctttcaccagtttagtttcatcatatacatctgctactgcg
gccggctactcggtggattaccattcggcgatgacgccgccgtcgtcggtctcgccacga
gacaaacagcagcaacaacagcagcaacagcaacagcagcaacaacagcagcagcagcaa
cagttacatcctgtgaacgtgataagcagttacgaaggctcgtcggcgtacgcggatccc
gttcttcgtcaccagtatgaaccggctcagccgttacccttaaaacctcaggtgtactcg
gccactgtccatccgagtgccttagacgccgcagcggcgtatgcctcggcaggcctgacg
gaacaaccgcagttctaccatcatccagccagtagcgccggcttccacatctaccatcca
agcaacaaatcggcgacgaacggctggtacacttcggcctcctag

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