Cyphomyrmex costatus: 108778454
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Entry
108778454 CDS
T11118
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108778454
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoa01007
]
108778454
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoa03016
]
108778454
Enzymes [BR:
ccoa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
108778454
Amino acid related enzymes [BR:
ccoa01007
]
Aminoacyl-tRNA synthetase
Class II (A)
108778454
Transfer RNA biogenesis [BR:
ccoa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108778454
Prokaryotic type
108778454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
108778454
NCBI-ProteinID:
XP_018401137
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MNVEPTVVEPSNLGRASIPLSSEVRRNREPPRWRVGNYSRSASSFLRSGYKVMRRRTERT
ESGLRDTECSATLPHVLAMADETRPRDTLLSRVKEQGEVVRRLKAAKVDNTQIAEEVAKL
LDLKAQLGEENGCPHKLILKTPKGTRDYNPEQMALRLGVLEKIVSVFKRHGAETIDTPVF
ELKDVLTGKYGEDSKLIYDLKDQGGEILALRYDLTVPFARYLAMSKISSIKRYHIAKVYR
RDNPATTKGRYREFYQCDFDIAGQYDPMLPDVECIRVVCEALEALNLGPYLIKVNHRSLL
DGIFAACGVPQNKFRSICSSVDKLDKSPWEEVKKEMTDEKGLDEHIADKVGKYVSQSGGV
ELIAELRKDKELMKQSVAVQGLDSMELLLKYCGIYKILDKIKFDLSLARGLDYYTGVIYE
AILCGDDVGVGSVAGGGRYDNLVGMFDSKNKNVPCVGVSVGVERIFSVMEAKLANKGLKT
RTTEIEVFVASAQKNLHEERMKILVDLWNAGVKAEQSYKKNAKLLAQLQHCEENGIPLAI
IIGEGELAKGEVTLRVVSTREETRVLRSNLIDEIQRQLKLS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcgagcccacggtggtcgagccctcgaacctgggtcgagcctctatacctctc
tcgagtgaagtgcgccgcaatagggaaccgccgcggtggagagtgggaaattactcacgc
agtgcgagttcgttcctcagatcaggctataaagtaatgcgccggcgaacggaacgcacg
gaatcagggctccgagataccgagtgtagtgctacactaccacatgttctagcgatggct
gacgaaacgaggccgagggatacgttgctgagtcgtgtgaaggagcagggcgaagtagtg
cggcgattaaaggccgcaaaggtcgataacacgcagatagcagaagaagttgccaagttg
ttggatctgaaagcacaattaggagaggagaatggttgccctcataaactcatcctcaaa
acgccaaaaggtacaagggattataatccggagcaaatggcgctgcgattgggagtgttg
gaaaaaatagtatcagtattcaagcgtcatggcgctgagacgatagatacacctgtattt
gagctaaaggatgtcttgacaggtaaatatggtgaagactccaagcttatctatgactta
aaggatcaaggtggcgaaattcttgcacttagatacgatttgacagttcctttcgcgagg
tatttggccatgagcaaaatttcttctattaaaagatatcacattgccaaggtctatcga
agagataatccagccacaacgaaaggcagatacagggaattttatcaatgtgatttcgat
atcgcaggccagtatgatccaatgttaccagatgtagaatgcattcgggttgtgtgtgaa
gcgttggaagctctaaatcttggaccatatttaattaaggtgaatcatagatctttattg
gacggcatattcgccgcgtgtggtgtgccacagaataaatttcgcagcatctgttcctcc
gtggataagctagacaagagtccatgggaggaggtaaagaaagaaatgacggatgagaaa
ggattggacgaacatattgctgataaagtcggcaagtatgtctcgcaatctggtggagtg
gaactaatagccgagttgaggaaagacaaagagctaatgaaacagtctgtcgctgtgcaa
ggtttagactctatggaactgttactaaagtactgcggcatctataaaattctggacaaa
attaaatttgatttgagtctcgcgagaggacttgattactatacgggtgttatttacgaa
gctatattatgtggagacgatgtcggtgttggaagtgtagcaggtggcggccgttacgat
aatttagtgggaatgttcgatagcaagaataaaaatgtaccttgtgttggcgtatcggtc
ggtgtggagcggatattcagtgttatggaagcaaaattggcgaacaagggcctaaaaacg
cgtactactgagatcgaggtgtttgtagcgagtgcgcaaaagaatctgcatgaggagagg
atgaaaatactggtggatctgtggaacgccggtgtaaaggcggaacagtcttacaagaag
aatgccaagctcttagcacagctgcaacactgcgaggaaaacggcatcccgctggcaata
atcattggggaaggcgaattagcaaagggtgaagttacattgagagttgtctcgacacga
gaggagactcgcgtgctacgtagcaacctcattgatgaaatacagagacaattaaaatta
tcatag
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