Cyphomyrmex costatus: 108778873
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Entry
108778873 CDS
T11118
Name
(RefSeq) rab GTPase-binding effector protein 1 isoform X1
KO
K12480
Rab GTPase-binding effector protein 1
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108778873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108778873
Membrane trafficking [BR:
ccoa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108778873
Protein recycling
Rab4 associated proteins
108778873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab5-bind
FYVE
Rabaptin
zf-RING_5
IBR_1
Zn_ribbon_IS1595
ENOX1
Zn_ribbon_5
IBR
zf-RING_UBOX
DUF5998
zf-RING_2
Zn_ribbon_4
zf-C3HC4
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
108778873
NCBI-ProteinID:
XP_018401688
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MENQDDRTVKANGNEDPQAKISRLESENVKMREEFNVQRAKMKELFLQKEEELKRRLEEN
MGLQKENLRLKNELDEAKSQLVVADLKIQNHILIEKRKAQEEIASLQQVIHETVEESSCS
RKQLVNEVSKLQLALSKLQEENMILKTQLPRDPPTDGPQISLSTVTKTLARKVVSQLGAD
SLSLGPDNLEESMRKVKKYAQEDAEVLRSLVVPLEEEIKALKEKLRSTDDELQKCKEVLL
KKRQQEPGSFEPSCDMCANYEAQLVKVEATAKNLEKQLLDSQRMLQAQKEDLAKEVEFRK
EMEEKWNEKKEEHKIKVAELTVTSQTAQQNLLELKKTFEQIQRNVSEELCKLTRGREEVQ
RHLTILQMENENLVGKHSKHSQQLQSESINMPNTVEELHMSLLKVREDLITAKVAQEVAQ
EKEETLRYEVTLLREQMEQESRVKEQDIAVLKNEMSGLSAQLDKYIRDHRTLADREEKLD
RLEKQLQEIQKEKKDADSVISELRQRVMSLQQELDTSEAVQKDFVRLSQSLQVQLERIRQ
AGSEVRWQHEEDIEECPSCHTTFSVTKKKVHCRHCGHIFCQSCLSHVVNSGPKQRPSRVC
DVCHTLLVQDTAPYFSQEPPHTPD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccaggacgatcggacggtgaaagcaaacggaaacgaggatccacaggcgaag
atcagccgattggagtcagagaacgttaagatgcgagaagagtttaatgtacaaagggcc
aagatgaaagagttgttccttcagaaagaagaggagttaaagcggagactggaggaaaat
atgggcctacaaaaggaaaatctaagactgaagaatgagctggatgaggctaagagccaa
ctagtcgttgcagatcttaaaatacaaaatcatatattgatagagaaaaggaaggcccag
gaagagatagcgtctttacagcaagttatacatgaaacagtagaggaatcttcttgttcg
agaaaacagcttgttaatgaagtgtccaaattgcaattggctctttctaagcttcaagaa
gagaacatgatactaaaaacgcaattgccacgtgatccaccaacagatggacctcaaatt
tcactgtctacagtaactaaaacattagctagaaaagtggtttcacaattaggcgcggac
tctttatctttaggtcctgacaatttagaagaaagcatgcggaaggtaaaaaaatatgcg
caagaagatgctgaagttttacgttcgttggttgtgccacttgaggaggaaataaaagct
ttaaaagagaaactaaggtcaaccgatgacgagttacaaaaatgtaaagaagttctatta
aagaaacggcagcaggaacctggttcctttgagccgtcgtgtgatatgtgtgcaaactat
gaagcacaattagtcaaagtagaagcgactgccaagaatttagagaaacagctgttggac
tcgcaacgtatgctgcaagctcaaaaagaagatctagctaaggaagttgaattccggaaa
gaaatggaggaaaaatggaatgaaaagaaggaagagcataaaatcaaagttgcggaactc
actgttacctcgcagacggcgcaacaaaatttattagaactaaagaaaactttcgaacaa
attcaaagaaacgtatcggaggaactttgtaaattgacacgaggcagagaagaagtacag
agacatctcactatacttcagatggagaatgaaaatcttgtgggcaaacatagtaaacat
tcacaacaacttcaaagtgaaagcatcaacatgccaaacactgttgaggaattgcatatg
agtcttttaaaggtgcgtgaagatttaattacagccaaagtagctcaagaagttgcacaa
gagaaggaagagacattgcgatacgaagttactttattgagagaacaaatggagcaagag
agtagagttaaagagcaggatattgctgtattaaagaatgaaatgagtggattgagcgca
caattagataaatacataagagatcatcgtacactcgctgatagagaagagaaacttgat
cgattggaaaaacagctacaagaaattcaaaaagagaagaaggatgcagattcagttata
agtgaactacgacaaagagttatgagtttacagcaagaattagatactagcgaggcagta
cagaaagactttgttagattatcacaatcattacaggtacaactggaaaggattagacag
gcaggtagtgaagtaagatggcaacatgaagaggacatcgaagagtgtcccagttgccat
accacgttttcagttacaaaaaagaaggtacattgtcgtcactgtggccatatattttgt
caatcttgcctctcacacgttgtgaacagtgggccgaaacaaagaccatccagagtctgt
gatgtttgtcatactttattagtgcaagataccgcaccatatttcagccaagaacctcca
catacacccgattaa
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