Cyphomyrmex costatus: 108778919
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Entry
108778919 CDS
T11118
Name
(RefSeq) zinc finger CCCH domain-containing protein 14
KO
K23038
zinc finger CCCH domain-containing protein 14
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccoa03019
]
108778919
Messenger RNA biogenesis [BR:
ccoa03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
108778919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH_2
PWI
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
108778919
NCBI-ProteinID:
XP_018401746
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MDTRGIEVTNQLRSAIRAKLMELGVHYDEELPDYILVMVVNKKSRQQMHHDLNLFLEDCT
TIFVDWLHDQVLKKLQKVTVAKKKSSREFVPTVVVKQEEERKKKKILATSFLEDQAVEQS
SAVEKFPDKSTKSDKQPSAQKQQTIKSSIPNQNSERSHSKSVERNVKSVHSKSRTDEVSS
IPGSGSYQDSASLTRPQQSSGRDENTKEGTPENPATKITDSYSDLKESEAPNKNLKRSLE
SSSNRHDSTEKRSNEAKKPKLSEEEKEDTSPDTASKKLKSYVNKPKIVSVVSVKNRLGMV
SPRKKFEIYREREGNGRHYLLEKRFENQHRYDIGRSGKGRTFEMDDRGSRRIRDGDSSRY
HETMSKVNDVRSRIESSKSERLSRNAESRERNLNSSSTTDASAKKSVCTIKDRLGINSKV
QQRQSTKLQEAADYRNNPKSLDQAGNNNKNIKDRLGPLKSSFRPVHKQGQLRSSENNRSL
VSLNSAGERHEGEKGKETEDEDEVDNDEQLIGPMKSHIVAVNRHASATVTKTDRRRMKIS
NDLFSATQSISKTLGHSGVKSQDKMNKRTFSDVDEDTDDMRLPSKVIVTPRPLKPLQPTQ
KRATQSLLLRAVAEANQSVVTQKNPEPSLFDKKPILKRLKPAPARDVSQNLSVHFNSSKR
LVMEKIQVELNTIDHLDTEDVEPEPYVPQPVTDEHMGVMMSLFQRSNDNQKFLVTLNGYN
NNLLKEKISSEDDEERLVMEVNEDDELSLLTHNEATTMTATTTMAGMAQNELEINKFRIT
GATEDNVHASPQEASGEENNENCNTENVDKIDEMPRKRRKLSPIIYNRSHSPSPIQLKSN
ASLASTLATKPPDKKPLVENTASVISDKSREKCRYWPNCTLGNKCAYLHPPVMCSAFPAC
KFGDKCAYKHPKCKFGLSCTKLGCVFSHPAQQCKYHPFCTKPACPYSHPVTSTPAAEVSQ
RAKFTWRRRD
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggatacgcgtggcattgaagtcacaaatcagctccggagcgccattcgcgccaagctt
atggaattgggagtccactacgacgaggaactacctgattatatattagtaatggtggtg
aacaagaaatctcgtcagcagatgcatcatgacttaaatctgttcctagaggactgcacg
actatattcgtggattggctgcacgatcaggtgctaaagaaactgcagaaagtcactgta
gccaagaaaaaatcatctcgcgagtttgtacctaccgttgtagtaaagcaagaggaagag
agaaagaaaaaaaagatattagcaacttcgttcctagaagatcaggcagtggagcagtct
tcggctgtcgagaaattcccggataaaagtacgaagagcgacaaacaaccatcggcgcag
aagcaacagacaataaaatcttccatacctaatcaaaactcagaacgaagtcacagcaag
agcgtggaaagaaatgtgaaaagtgtgcacagcaaaagtagaacagacgaagtatcgtcg
atacccggcagcggatcttatcaagactctgcctctttgacgaggccgcagcaaagttct
ggacgcgatgaaaacacaaaggaaggcacgccggagaatcccgctacaaagatcacagat
tcatatagcgatctgaaagagagcgaggcgccgaataaaaatctaaaaagatcattggag
tcgtcgagtaatcgtcacgacagcacggagaaaaggagtaacgaggcgaagaagccgaag
ctatccgaggaagaaaaggaagatacttccccggatacagcttcaaagaagctcaaatcc
tacgtgaacaagccaaagattgtgtctgtcgtatctgtgaagaatcggcttggtatggtc
tcaccacggaagaaattcgagatctacagagagagggagggcaacggtcgccactatctg
ttggagaagcggttcgagaaccagcatcgctacgacattggacgtagcggaaagggcaga
acctttgagatggacgatcgaggttccagacggattcgcgacggcgactcatcgcgatat
cacgagactatgagcaaagtcaacgacgtaaggagtcgaatagagagcagcaagagtgag
agattgagcagaaacgcggagtccagggagaggaatttgaattcaagttccacaacggac
gcatccgcaaaaaagtctgtgtgcactattaaggatcgtctgggtatcaatagtaaagtc
caacagagacagtccacaaaattacaagaagcagcagattatagaaataacccaaagagc
ttggatcaagcgggaaataacaacaaaaacatcaaggataggctcggtccgttaaaaagt
agtttcaggcctgtccataaacaaggacagcttcgcagcagcgaaaacaatagatctcta
gtttctctgaattccgctggcgagagacacgagggtgagaaggggaaagaaaccgaagat
gaagacgaagtggataatgatgaacagctgatcggacctatgaagtcgcacatagtcgct
gtaaacagacatgcatccgccactgttacgaaaaccgataggagacgtatgaaaatatcg
aatgatttgttcagtgcgactcaaagtatcagcaaaaccttgggacacagtggcgtgaaa
tctcaggataagatgaacaaaaggacattcagtgatgtggacgaggataccgatgatatg
agattaccgagcaaagtaattgtcacgccaagacctttgaagccgctgcaaccgactcag
aaacgtgccacacagtcgcttttgttacgagctgtcgcggaggcaaatcagtctgttgtt
acacagaagaatccggaaccgtctctatttgacaagaagccaatcttaaagcgtcttaaa
cctgccccggctcgtgatgtaagtcaaaacttgtcggtacattttaattctagtaagaga
ctggtcatggaaaaaattcaagtcgaattaaatacgatagatcatctggatacggaagac
gtcgagcctgagccttatgtacctcaaccagtaacggacgagcatatgggagtcatgatg
tcgttgttccaaaggagcaacgacaatcaaaaattcttggtcactttgaacggatacaac
aacaatcttctgaaggagaagattagttccgaggatgacgaagaacgactggtaatggag
gtgaacgaggatgacgagctttcactgttgacgcacaatgaagcaacgacgatgacggcg
acaacgacaatggcgggaatggcacagaacgagttggaaataaataagtttagaataaca
ggcgctacggaagataacgtgcatgctagtccgcaggaagcgagcggagaagagaataac
gagaactgcaatacggagaacgtagataagattgacgagatgccgcgtaaacggagaaaa
ttaagccctataatatacaatagatctcattctcctagtcctatacaactgaaatctaat
gcgtctctagcgtcgacgttagccaccaaacccccggataaaaaacctctggtagagaat
acggcctctgtcatttcagataaatctagagagaaatgtagatactggccaaattgtacg
ttagggaacaaatgcgcgtatcttcatccccctgttatgtgcagtgcctttccggcatgt
aagtttggtgacaaatgcgcctacaagcatcccaagtgcaaattcggtttgtcttgcaca
aagctaggttgcgtgttctcgcatcctgcccagcaatgcaagtatcatccattctgtacg
aaaccggcctgtccgtattcccatccagtcacttccactccggcagcagaagtaagccag
agagcaaagtttacttggcggcgacgagattga
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