Cyphomyrmex costatus: 108779269
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Entry
108779269 CDS
T11118
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108779269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoa03400
]
108779269
DNA repair and recombination proteins [BR:
ccoa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
108779269
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ZGRF1-like_N
HDA2-3
SWI2_SNF2
AAA_22
AAA_34
Motif
Other DBs
NCBI-GeneID:
108779269
NCBI-ProteinID:
XP_018402156
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MAEGSKLIIGNKQVEIIDKVSTEQSVLQKSPEVEKPLQKKLKTVATYAFQSPKKDENATA
FEKKVSTENSPKAKTKTKFNVMFGKVTSKKHKTWDSDGLLEIVGKSAILKNLDGNIIGRT
TINPSNAVEGFRLIIGNKQVEIIEQVSQELFVPEKSLEETVEELSKNKSKTSTHAFMPLL
SSTKAAKLREHQRHGIVFLYECLMGLKVPNYFGAILADEMGLGKTLQCIALIWTMLKKGP
YGKPIVKRVLIVTPSSLCKNWEKEFVKWLGCHRIFPYVIDGKNKPKDFMKYPRNSVMIIS
YEMFVKCHIEINEIAFDLIVCDEGHRLKNSNVKAAKMLNEISCKKRIILTGTPIQNDLKE
FYALIDFVNPGILGTSIEYKNYYEDPIVAAQCSSADDDVLSLGNERSVELYKRTKSFILR
RTQKTINKYLPHKYEMVLFCSLSKKQKDLYSLVTDVWFNKICLEDKSNIHLSIITALKKI
CNHPNLFLNEEEKAIYDVLSKSPYMSQIKRDDNFTEYCGKITIVQTLMRNLKKTDEKLVL
VSYYTQTLDLLETICDMERLKFLRLDGATSSSVRLKITEKFNMQTDDSKVLLLSAKAGGI
GLNLPGASRLVLFDSDWNPASDVQAMARIWRDGQKRNVYIYRLLTTGTIEEKIYQRQISK
ANLSEIVVDLNHVGSLKLSTADLKNLFTLASDTISLTHDLMNCCCSGKNEHILSEDPKEK
NNETRDCQFILCEKPSQQNLTINQLRDWQHYKQPIPSDIMQDIMLTEVSDNITFIFKN
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggttccaaattaattataggaaacaaacaagtagagattatagataaagtg
tcgacagaacaatccgtattacagaagagtcctgaagtagagaaaccattgcaaaaaaaa
cttaaaacagttgctacatatgcatttcagtcaccaaagaaagatgaaaatgctacagct
tttgagaaaaaagtatcaactgaaaattcacctaaggcaaaaactaaaaccaaattcaac
gtgatgtttggcaaagtaacttcaaaaaaacataaaacatgggatagtgacggtttgctg
gaaattgttgggaaaagtgctattcttaagaatttggatggtaatatcattggaagaact
acaattaatccaagtaatgcagtagaaggattcagattaattatagggaacaaacaagta
gagattatagagcaagtatcacaagaattgtttgtaccagagaagagtcttgaggaaaca
gtagaagaactatcaaaaaacaagtctaaaacgtctacacatgcatttatgcccttgctt
tcatccacaaaagctgcaaaacttagagaacatcaacgccatggaattgtgtttctttat
gaatgtctaatgggactaaaagtaccaaattattttggtgcaatcttggctgatgaaatg
ggtcttggtaaaaccttacaatgtattgcattaatttggacaatgttgaagaaaggccca
tatggcaaaccgattgtgaaacgcgtattaatagtaacacctagtagcttatgcaaaaat
tgggaaaaagaattcgtgaaatggttgggctgtcacaggatatttccatatgttatagat
ggaaaaaataaacctaaagattttatgaaatatccaagaaattcagtcatgattattagt
tacgaaatgttcgttaaatgtcatatagaaattaatgaaatcgcttttgatttgattgtg
tgtgatgaaggtcacagattaaaaaatagcaatgtaaaagcagcaaaaatgttaaatgag
ataagttgtaaaaaacgaattattttaacgggtacacctattcagaatgatttaaaagaa
ttttatgcactgatcgattttgttaatcctggcattcttggtacttctattgaatacaag
aattattacgaggatcctattgtcgcagcgcaatgttcttctgctgatgatgatgttctc
agtctaggaaatgaaagatctgtagaattatacaagcgcaccaaatcttttattttaagg
cgtacacaaaaaacgataaacaagtatctaccacataaatatgaaatggtcctattttgt
tctttatccaagaaacaaaaagatttatattctcttgttactgatgtttggttcaacaaa
atttgtctagaagataaaagcaatatacatttgtctatcattactgctcttaaaaaaatt
tgcaaccatccaaatttgttcctaaacgaagaagagaaagctatatatgacgttttgtca
aaatcaccgtatatgtcgcaaataaaacgagatgataattttactgagtattgtggaaaa
atcacaattgtacagacattaatgagaaatttgaaaaagactgatgagaagttggtgtta
gtctcctattatacgcaaactcttgatcttcttgaaactatatgcgacatggaaagatta
aaatttttaagattagatggtgctacttcaagctctgtacgattaaaaattaccgaaaaa
tttaatatgcaaaccgatgatagcaaagttctattgttaagtgcaaaagcgggtggtatt
ggtttaaatttacctggagcatctagacttgtgttatttgattctgattggaatcctgca
tctgatgtgcaagcaatggcaaggatctggagagatggacaaaagaggaatgtttatatt
tatagattattaactacaggtacgatagaagaaaaaatatatcaaagacaaattagcaaa
gccaatttgagtgagattgtagtggatctgaatcatgttggatctctaaaattatctact
gcagatctaaagaatttatttacgttggcaagtgatacaatttcattaacacatgattta
atgaattgttgttgttctggtaagaatgaacatatactttccgaagatccaaaagaaaaa
aataatgaaacacgagattgtcaatttatattgtgtgagaaaccatctcaacaaaattta
actataaatcagcttcgagattggcagcattataagcaaccaattccatcagatattatg
caggatattatgttaacagaagtaagtgataatataacattcatatttaaaaat
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