Cyphomyrmex costatus: 108779442
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Entry
108779442 CDS
T11118
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1-like
KO
K11274
chromosome transmission fidelity protein 4
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108779442
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
108779442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Mcl1_mid
Sugar_tr
MFS_1
WD40_CDC20-Fz
WD40
Ctf4_C
Beta-prop_EML_2
WD40_Prp19
ANAPC4_WD40
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Vps41
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
HMG_WDHD1
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
HMG_box
DUF6476
Motif
Other DBs
NCBI-GeneID:
108779442
NCBI-ProteinID:
XP_018402376
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MSLIRKPMRYAHQEGHTDVCYYSGEKRGLVTCGRDGDVRFWLNLMDDDPTTSCISEQAIT
AISKNGKIFVGNDNNTVQILTYPDLEKEGIVTRFSAPVSALATTKNSSLIISGACDMRIQ
VTNINTSDSIELEGHEAPILGLSLDPKEEFVASSSADGSIRVWNIKEKQTVHIWNNIVPK
CNSFFIAKSYCTPSFKCTDGSCLAYPSNKDVVIVERLSWKELCRLKCPTLKTDISICKFS
ECGTRIAASSLYGEIVVWNVETKEMIGYLEHEQDAKITALVWHIDHSNEIAFCDALGKLG
CIDVISVSKPRSEVILDFEQNEDVMENDILSDNDDDDENVISLNKIKASINLKNDEKSNF
DVDFEKPSCDTKTFIPNVKLQSSFQPGSTPSHLLSYFMMWNDVGMIRCFSSEDGEECSIE
VEFHDVTVHRSMHINNYLRHSLAALSTQALVLSCPASEDGPSKIVVIALQGWGSGNKEWS
LDLPEGEESECLAVGDNFVAVATSRRNLRIFMIGGTQREILALPGPVVVMNGLGNHLVIA
YHAGVGPAGDQNISLLWIQIQGAHLRSQTLTLPLSPTSDLMWLGLSDARSPTIMDSDDVI
RIYDKKSCQWRVLCDANAQGKGRADHYFIIGVSEYERNMRCILCKGSYYPPTTPRPIITE
VSLSAPLCEPESEKTEKERKLWEIGNNPLDETEAILTLIALACKSNLEYRAVDICEQIAS
TKVIDLAVRYALRLNKMALANKLETIADAKSDSKNTREEEMENHQDDFTSNNSNNQDNNQ
EDNDVSLPSIKKPEIEIKPLVMSQTLKRVNPFLKAGSPSLSPRGLAGLNSLPKKPQKPVL
PNITPVKSKSKTESKKESFINWYSKNKKNLQEEFPEVNVTELTKIGLARYKEVSSQSNTD
NVIESSELVKKRKLSNHVPLDPIQEAMGSMGLWHIVIAVAISLVKFPVAWHQLSIVFLAP
PTNFSCIAPLSATNDSMIMKCEVNVGNDTIEECTKFAYDKRIFRESIITQWNLVCDREQL
ANLAQSCTMFGVLVGNLIFSMMADRIGRKKPLMIAIALQSVTGFASAFAPWYELFLILKF
VCAVSTGGTMLVSFVLLMEIIGVKWRSIMSVLYHVPFLIGHVMNPLISYLTLTWYGFQMA
VSIPSIFLLSYYWIIPESPRWLLVVGKHKRAERILLKAARRNKIPVENVKLALETYENQR
TIRHTKNNEKYNITHLFRTPNLRLKTTYVSVNWFVCGICFFGLAQYMGHLDGNIFINVAV
SAAMEIPGTIIVLFLISRVSRLKILMGGNILSGVSLLLITLVTNGNVRIFLASLGLVGMA
ISFPTVYLYSCEVFPTVVRNVGVGLGSTSARIGSIIAPFIATMGTIKPWLPPVIFGIAPI
LGAILCLFLPETMNCELPETIEDAENFRKEKSEEH
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaataaggaaacccatgcgatatgctcatcaagaaggacacaccgacgtttgc
tattattctggcgaaaagagaggactcgttacttgtggacgtgatggagacgttagattc
tggttaaatttaatggacgatgatccaaccaccagttgtatttcggaacaagcaattaca
gctatttcaaagaatggtaaaatttttgtgggaaatgacaataatactgtacaaatactt
acttatcctgatttagaaaaggaaggaatagttactagattttcagcaccagtttcagca
ttggcaacaacaaaaaatagtagtttaataatatctggtgcttgtgatatgcgaatacaa
gttacaaacattaatacttcagacagtatagaactagagggtcatgaagcacctatctta
ggtctatctttagatccaaaagaagaatttgtggcatcttctagtgctgatggatctatt
cgagtatggaatattaaagaaaagcaaacagtacatatttggaataatattgtaccaaaa
tgtaactccttttttattgcaaagtcatattgtacaccttcttttaaatgtacagatggc
agttgcttagcatatccatctaataaagatgtagttattgtggaaagattatcctggaag
gaattgtgtagattgaaatgtcctactttaaaaactgacattagcatttgtaaattttct
gagtgtggcacgcgcatcgcggctagttcactgtatggagagatagttgtatggaatgta
gaaaccaaggaaatgattggatatctcgaacacgaacaagatgccaaaatcactgcattg
gtgtggcacatagatcattcaaatgaaattgcattctgtgatgcactaggaaaattagga
tgcattgatgtgataagcgttagtaagcctagaagtgaggtaatcttagattttgaacaa
aatgaagatgtaatggaaaatgatattttatcggacaatgacgatgatgacgaaaatgtg
atatccctgaataaaataaaggcctctatcaatttaaagaacgacgaaaaatctaatttt
gatgtagactttgaaaagccttcatgtgacacaaagacttttatacctaacgtaaaattg
caatcatcttttcaacctggatctacaccctctcatttattatcatatttcatgatgtgg
aacgatgtgggaatgattagatgtttttcatcagaggatggagaagaatgtagtattgaa
gtagagtttcatgatgttacggttcatcgcagtatgcatataaataattatttgcgacac
tctttagctgccctgtctactcaagcacttgttctaagttgtccagcttctgaagatggt
cctagtaaaatcgtcgtgatagctttgcaaggttggggttctggaaataaagaatggtct
ttagacctaccagaaggagaagaaagcgaatgcttagcggttggtgataattttgttgca
gtagcaacgtctagaagaaatttaagaatattcatgataggaggaacacaacgtgagatt
ttagctctgcctgggcctgtagttgtaatgaatggtctaggtaatcatcttgtaatagct
tatcacgctggagttggtccagcgggtgatcagaatataagtttattatggatacaaata
cagggagcgcatttacgcagtcaaactttaacgcttccgctttcgccaacatcggatctc
atgtggttgggattatcagatgctcgttcgcccactatcatggattctgacgatgttatt
aggatatacgataagaaatcttgccaatggagagtactctgtgatgcaaatgcacaggga
aaaggtagagcagatcactatttcataatcggtgtgagcgaatacgaacggaatatgcga
tgtatcctctgtaaaggtagttattatcctccaactaccccgcgaccaataattaccgag
gtatcgctatctgcacctctctgcgaaccggaatctgaaaaaactgaaaaagaacgtaaa
ctatgggagataggaaataatccgttggatgaaactgaagcaatattaactttaatagcg
cttgcctgcaaaagcaatttggaatatcgtgcagtggacatttgcgaacaaattgcgtca
acgaaagtgattgatttagccgtacggtatgccttgcgtttaaataaaatggctttggca
aataaattagagacgatcgctgacgcaaaatcagattccaaaaatacaagagaagaagaa
atggaaaatcatcaagacgattttacaagtaataattctaataatcaagacaataatcaa
gaagacaatgatgtgtctttaccatccattaaaaaaccagagatagagattaagccattg
gtcatgagtcaaacattaaaaagagtaaatccatttttaaaagccggaagtccatctcta
tcgccaagagggttagctggtttaaatagtttacccaagaagccccaaaaacctgtgtta
cctaacattacgcctgttaaatcgaaatcgaaaaccgagtcgaaaaaagagtcgtttatt
aattggtattccaaaaataaaaagaatttgcaggaagaatttcctgaggtaaacgttacc
gaattaacaaaaatcggtttggcacgatacaaagaagtgtcatcgcaatcgaatacagac
aatgtgattgaatcttcagaactcgtcaagaaacgaaaattatcaaatcacgtaccgttg
gaccccatccaagaggccatgggctccatgggtctatggcacatcgtgatcgccgtggcg
atttctctcgtaaaatttccagtagcttggcaccagctctctatcgtgttccttgcaccg
cctactaatttctcatgcatcgctcctttgtcagcaactaacgactccatgataatgaaa
tgtgaagttaatgttgggaatgacacgatagaagagtgcactaaattcgcatacgataag
cgaatattccgagagagtatcataacgcagtggaatttagtatgcgatagagagcaattg
gcgaatttagcacaatcttgcacaatgtttggtgtgctcgttggtaatttaattttcagt
atgatggctgatagaattggcagaaagaagccgttaatgatcgcgattgcacttcaatcg
gtgacaggatttgcgagtgcatttgcaccgtggtacgaactgttcctaatactaaaattt
gtttgtgccgtatctactggtggaacaatgctcgtcagtttcgttttacttatggaaatt
attggggtaaaatggcggtcgattatgtcagttctttatcacgtgccatttttaattgga
catgtaatgaatcccctgatatcttatttgacacttacatggtatggatttcaaatggcc
gtctcgataccatcaattttcttattatcgtactactggattattccagaatcaccgaga
tggttactagttgtaggcaaacacaaacgggcagaacgaattttgctgaaagctgccaga
agaaacaagataccagtggaaaatgtaaagctagcgcttgaaacttatgaaaatcagaga
acaattcggcacacgaagaacaatgagaaatacaatatcacgcatttatttagaactccg
aatttaagattgaaaactacatatgtgagtgtcaattggttcgtctgtggtatctgtttc
ttcggattggcgcaatatatgggtcatctcgacggcaatatattcatcaatgtcgcagtt
tctgccgccatggaaatacctggaaccataatagtactgtttctgatatcgcgagtttcg
cgtttaaaaattttgatgggcggaaacattttgtccggtgtgagcttgcttttgataact
cttgtaaccaatggaaatgtccggatatttttagcttcgctagggcttgtgggaatggct
attagctttcctacagtatacctgtacagttgcgaagtatttccgactgtcgtaagaaac
gtcggcgttggtttaggaagtacttctgccagaatcggaagtataatcgcaccgttcatc
gccacaatgggtactattaaaccttggctacctccagtaatatttggcatagcaccgata
ttaggcgctatactctgtttatttttaccagaaacgatgaattgcgaattaccagagaca
atagaagacgccgaaaactttaggaaagaaaaatccgaagaacattga
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integrated database retrieval system
