KEGG   Cyphomyrmex costatus: 108779515
Entry
108779515         CDS       T11118                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108779515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccoa03019]
    108779515
Messenger RNA biogenesis [BR:ccoa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     108779515
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 CSTF1_dimer WD40_WDHD1_1st WD40_CDC20-Fz WDR55 WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_TEP1_C Beta-prop_DCAF4 Ge1_WD40 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_WDR75_2nd PROPPIN Cytochrom_D1 Beta-prop_NWD2_C Beta-prop_RSE1_2nd Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 108779515
NCBI-ProteinID: XP_018402439
UniProt: A0A195C641
LinkDB
Position
Unknown
AA seq 437 aa
MKEPEADPKNIIKSRELLYRLMISQLFYDGHQTLAVQLSNMIQADPPCPPSDRLLHLMLI
GSVHEPDRTKKDNSTNLSSFASSFDNTLGPGLDLEFETETQTQAPEPAQYETAYVTSHKG
NCRAGAFSADGQLIATGSVDASIKILDVDRMLAKSAPEEIAPGDQTGGHPVIRTLYDHLE
EVTCLEFHPREPILVSGSRDFCVKLFDFSKASVKKAFRTITDADQIRCLSFHPTGDFLIV
GTNHPIVRLYDVNTAQCFVCSIPNHQHTAGVTSIKYSPDAKTYASAGKDGSIKLWDGVSN
RCVNTFAKAHDGYEVCSVMFTRNGKYLLSSGKDSLIKLWELSTSRCLIAYTGAGTTGKQE
HKAQAIFNHTEDYVMFPDEATTSLCAWNSRNASRKQLLSLGHNGPVRMIVHSPTAPAFLT
CSDDFRARFWFRRMPTH
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgaaggaacccgaggcagacccaaagaacatcataaagagtagagaactgctctataga
ttgatgatcagtcagctgttctatgatggtcatcagactctagctgtgcagttatccaat
atgatacaggcagatccaccatgtccaccttcagatcgactacttcatttgatgttgatt
ggttctgttcacgaaccagatcgtaccaagaaggataacagcactaacttatcctcattt
gcatcgagttttgacaacaccttaggtcctggattagacctggaatttgaaacagaaact
cagactcaagctccagaaccggcacaatatgaaacagcatatgtcacgtctcacaaagga
aactgcagggctggagctttctcagcagatggtcagctgatagctactggttctgtagat
gcctcgatcaagattttagatgttgacagaatgctggccaagtctgcaccagaagagatt
gcacctggagatcaaactggtggtcatccggttataagaactttatacgatcacttggaa
gaagtaacatgtttggagtttcatcctagggagcccatacttgtatctggcagccgtgac
ttttgtgtgaagttgtttgattttagtaaagccagcgttaagaaggcttttaggaccatc
acggatgcagatcaaattcgatgtctgtcttttcatccaactggagattttcttatagtc
gggaccaatcatccaatagttagattgtatgatgtaaatactgcacaatgttttgtgtgt
agcataccaaatcatcagcatacagctggagtaacgagcatcaagtattcgccagatgca
aagacttatgcatcggcaggaaaagatggaagtatcaaactttgggatggagtgtcaaat
cgatgtgtgaacacttttgcgaaagcacacgatggttatgaagtttgttcagtgatgttc
acgagaaatggcaagtatttattatcttcaggaaaggattccttgataaagttatgggaa
ttatctaccagcagatgtctaatagcatatacgggtgctggaactacaggtaaacaggaa
cacaaggcacaggcgatctttaatcataccgaggactacgtgatgttccctgacgaagcc
actacctcattgtgtgcatggaattctcgtaacgcatcaagaaaacagttgctgtcattg
ggtcataacggtcctgtgaggatgatcgtgcattcaccaaccgcgcctgcatttttaaca
tgcagcgacgatttcagggcaagattctggttcagaagaatgccaacacattaa

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