Cyphomyrmex costatus: 108779521
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Entry
108779521 CDS
T11118
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108779521
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccoa01009
]
108779521
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccoa04131
]
108779521
03029 Mitochondrial biogenesis [BR:
ccoa03029
]
108779521
Protein phosphatases and associated proteins [BR:
ccoa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108779521
Membrane trafficking [BR:
ccoa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
108779521
Mitochondrial biogenesis [BR:
ccoa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
108779521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
SATase_N
Ig_NUP210_15th
Motif
Other DBs
NCBI-GeneID:
108779521
NCBI-ProteinID:
XP_018402448
LinkDB
All DBs
Position
Unknown
AA seq
1459 aa
AA seq
DB search
MLYIFHVDTGTTITFDIKLALQSVSQLMEAIERECGVIAAHQVLLMSGGECLEPNARVCS
YSAGTDTNPIYLFSKAAIESSLPPTPSIDYGSDVDLQTQIDASLAMPATYQTLCARAHLA
QQCCGLAREQTRICERLVHDQHLQQQGWAAVVANLEDITHMFQLRAEQFQQAFVLYLAER
QQHMKLLDNFSTDLGTLAKIPILPALRAQAEGLLSPDDQPSQTSETTSEDSGEVLSLLRW
ISAKDNQSSLEQVAEQCSRGLEQFDERLMQVLKAEVNGAVDNANKQDMKEIKGLGERLFA
LEQLMVQTKRLVHEQGELAQGFLQNQNRASNLGDASVLPDLCNSHRRQLLVMLQNHNQLR
DIRRRCTKAKEELSVNIYHRLKWIMYVENKMVEVGNKLIIYHESLKRLRRHLEVLQQIHL
APQMYISAVVEVVRRRTFSQAFLVWASNLACQLLTVHSEELARRREFQSKFDGHFLNTLF
PGLEDTPPPFATQAPSVFDNGLPKLTADDMESLRSQLPDLALTISTPDLSSITQFFLSKS
FTEGSTDGTKEKDTTSVSTDIPAKEQERTRAPLLSDRGDFESETDTEEFEKIGQAGVDVT
KPGVFDGAKQKRQKQLEVGASRSVSPASSTSTNVSPLNSKVADLTTRSSTSSEPGSFHFP
SLSATSERPVQLSPLTECVENGAADSSSCLLRRGVSDLSNYRDAIPLEDQPDSLSPNPPS
LIRSSVMCDGQHQQHQHPLSGSGGSSPSVGVGATDFMGTEFYMDESLPSSLSEHPADGQH
QAIVSLLQENLGNTREEVERLRSILKTMKTVVCEELSSVRNELAILRNQSNEDKNGIVEM
TERVRVALSLHSREYDRRLQKREQEMTIEHEYKIADVKKLMQSREEEICTLKHNLLVKET
ELAEYERLVTTMSQKLKDEQMERINLHDRLHQQLEDYSRVLEQARIDKEAVKKMNDERFL
EITSLTNSLTQCQKRIQELEENLVTARNDQERMVKEATDKLQMEYKTELDTIQSRFKLMT
ASTMERSPSDSSLEKIERTDVIELVNHETILAQAREDMKVENAVAVRTAIIKERADCMAK
LDNELRLAKEVVEEKNREIEIYRIRTAALIEQGKHYKHTIDRLLGDFELKSEIQQTLLQK
MKNLEADKTCLENKETAEKAMRTVLEQNDDIVYPLEAGVRKDYDRLDAGQIGLEDIFKES
EKYEVEVSESKKVRLETDDDDLARLSRRLESLENDNKRLSCELNSIRASKIAAEAKVEAL
MTDKIRLEVELLKERTKRTFGIDPMPENRDKDMNASVAVVSDSNSSRDAATSPEPTSRRS
SSKSICFHPSLPSYIHKKIVEKVAKMVQQGILTVTSCNPGDVVLVIWDSEHSNYAVYQES
STFYFLHSDCVDAMEGMNPSSVRKCILAEVIDKEYCHARKPENRYHVPRGTKFYRVRAKP
RDARALTDETGLMSKSQLP
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacatcttccacgttgacaccggcaccaccatcaccttcgacatcaagctggca
ctgcaaagtgtcagccagctgatggaggcgatcgagagggaatgcggtgtgatagcggcg
catcaggtgctgcttatgagcggaggcgaatgcttggaaccaaatgcacgcgtgtgctcc
tactcggctggaaccgacacgaatccgatttatctgttcagcaaggccgcaattgagagc
agcctcccgcccacgccgagtatagattacggttccgatgtcgacctgcagactcagatc
gatgcctcgctggcgatgccggccacttatcagaccctctgcgcacgtgctcatttggcc
cagcagtgttgcggcttggcgcgagagcagacgaggatctgcgagaggcttgttcacgat
cagcatctccagcaacaaggttgggctgcggtggtcgccaatcttgaggacatcacgcat
atgtttcaattacgagccgaacagttccagcaagccttcgtcttgtatctcgccgagaga
cagcagcacatgaaacttcttgataacttcagcaccgatctcggtactcttgcaaaaatt
ccaattttgccggccttgagagctcaagccgagggtttgttgagtccggatgatcaaccg
agtcaaacttctgaaactacgtcggaggatagtggggaagtactgagtttattacgatgg
atctctgcgaaagacaatcaaagcagcctagagcaagtggcagaacagtgctcgcgtggc
ctggagcagttcgatgaacgattgatgcaggtcttgaaagcagaagtgaacggggctgtc
gataatgctaataagcaagatatgaaggaaattaagggcctaggcgagaggctgtttgcc
ctggaacagctgatggtacagaccaaaagactcgttcacgagcagggggagcttgctcaa
ggttttctgcagaatcagaatcgcgcgagcaatttaggtgatgcgagcgtcctaccagat
ctttgcaattctcaccggcggcaattgctcgttatgctacaaaatcacaaccagctgcgc
gacattcgtcgcagatgcaccaaggcgaaggaggagttgtcggtgaatatctatcatcgc
ttgaagtggatcatgtacgtggagaataagatggtggaagtgggcaacaagctaatcata
tatcacgagagcctgaagcggttgcgacggcatctggaggtgctccaacagatccacttg
gctccgcagatgtacataagcgcggtggttgaggttgttagaaggcgcaccttttcgcaa
gcttttctcgtatgggcaagcaatctggcatgtcagctgttgactgttcacagtgaagag
ttagcacgtaggcgagagtttcagagcaaatttgacggccacttcttgaacactctcttc
ccaggcctggaggatacaccaccgccctttgcaacgcaagcaccttccgtttttgacaac
gggctacctaagctgactgcggacgacatggaatcattgagatcgcagcttccggatttg
gcgcttacgatttctacgccagatttgagcagcatcacgcaattcttcttatcgaaaagc
ttcaccgaaggtagtaccgatggcaccaaagagaaggacaccacatcggtgagcaccgat
attcctgcaaaggaacaagaacgtactagagcgccattgttatctgataggggcgacttt
gaatccgaaactgacacggaggagttcgagaaaattggtcaagccggcgtggatgtaacc
aagcccggcgtgttcgatggggcaaaacaaaaacggcagaagcaattggaggttggtgcc
tctcgaagcgtgtcccccgcttcctcgacctcgactaacgtctccccgttaaactcgaaa
gtcgcggatttaacgacacgttcgtccacatcaagcgaacctggctctttccattttccc
agtctatccgctacgagtgagcgtccggtgcagctaagtccgctgaccgagtgcgtggag
aacggcgccgccgattcttccagttgtttgcttcgcagaggtgtgagcgacctctcgaat
tatcgcgacgccataccgctcgaggatcaacctgattccctgagtccgaatcctccttcc
ttgatacggtcctctgtcatgtgcgacggccagcatcagcaacatcagcatccgttatcc
ggtagtggtggtagcagtccctccgtcggtgtaggtgctactgacttcatgggtaccgaa
ttttacatggatgaatctctgccgagcagcctcagcgaacatcccgccgacggccagcat
caggctatcgtgtcccttcttcaggagaacctcggtaatacgcgtgaggaagtggagagg
ttgcgatctatcctgaagaccatgaaaacggttgtatgcgaggagctcagttccgtgcgg
aatgaattggcgattctgcgaaatcaatctaacgaggacaagaacggcatcgtcgagatg
acggagcgcgttcgagtggcattgtccttgcattcgcgagagtacgatcgacgtcttcaa
aagcgtgaacaagaaatgacaatcgagcatgagtacaagattgcggatgttaagaagcta
atgcagagtcgtgaggaagagatctgcacgctcaagcataatcttcttgtaaaggaaact
gaattggcggaatacgagcgactagtgactacgatgagtcaaaaattgaaagatgagcaa
atggagaggataaacttacatgatcgtttacatcaacaactcgaggactattcgagggta
ctagagcaagcgcgtatagacaaagaggctgtaaaaaaaatgaatgacgagagattcctc
gagatcacttctttgacgaattcattgacgcaatgccaaaagcgaattcaagaactagag
gagaatctggttaccgcgcgcaacgatcaggaaagaatggtaaaagaggcaaccgataaa
ttgcaaatggaatataaaacggaattagacaccattcagagccgcttcaaacttatgacc
gcttctaccatggaaaggagtcccagcgattctagtttagagaagatcgaacgaacagat
gttatcgagctcgtaaatcatgagacaattttggcgcaagcaagagaagatatgaaagtt
gagaatgctgtggcagttcgtactgctatcataaaggaaagggctgattgcatggcaaaa
ttagacaacgaattaagattggcgaaggaagtagtcgaagagaaaaatagggaaatagag
atatacagaataagaacggccgcgttaatcgaacagggcaaacattataagcatacgata
gatcgattacttggagatttcgaactgaaatcggaaatacagcaaactttgctgcagaag
atgaaaaatcttgaagcagacaagacgtgtttggagaacaaagaaaccgcagagaaggca
atgcgaactgttttggaacaaaatgatgatattgtgtatcctctagaagctggagtacgc
aaagactatgaccgattggatgctggtcaaatcggtctagaggacattttcaaggaatcc
gaaaagtatgaggttgaggtctcagaatcgaagaaagtacgattagaaactgatgatgat
gatctggctcgactatcgaggcgacttgaatctctcgaaaatgacaacaagaggctatcc
tgcgagctaaattcgatacgcgcgagtaaaatagcagccgaagcaaaagtggaagcatta
atgacggataaaattcgtttggaggtcgagttactgaaagagcgaaccaagaggacattt
ggtattgatccgatgccggaaaatcgcgacaaagacatgaatgcatcggtcgcagtagtt
tcggactccaattcaagtcgggacgcggccacgagtccagagccgacgagtcgacgatca
tcttccaaatcaatatgcttccatccctcccttccctcatacatacataagaagatcgta
gaaaaagtggcaaagatggtacaacagggaattctcaccgttactagttgtaatccaggt
gacgtggtactcgtaatttgggactctgaacatagcaactatgcggtgtaccaagaatct
tctactttttattttcttcattcggactgcgttgatgcaatggaaggaatgaatccgagt
agtgttcggaaatgcattctcgctgaagtgatcgataaggagtattgtcacgcgagaaaa
cctgaaaatcggtatcatgtcccacgtggcacgaaattctacagagtgcgcgctaagcca
cgagatgcacgcgcgctgacagacgagacaggtttaatgtcgaagagtcaactaccgtaa
DBGET
integrated database retrieval system
