Cyphomyrmex costatus: 108779871 Help Entry 108779871         CDS       T11118                                  Name (RefSeq) nucleoporin NUP188 homolog   KO K14311   nuclear pore complex protein Nup188 Organism ccoa  Cyphomyrmex costatus Pathway ccoa03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:ccoa00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     108779871  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccoa03019]     108779871 Messenger RNA biogenesis [BR:ccoa03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      108779871 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Nup188_N Motif Other DBs NCBI-GeneID:  108779871 NCBI-ProteinID:  XP_018402894 LinkDB All DBs Position Unknown AA seq 1926 aa AA seqDB search MEVAPMGNLPCSKDLWSIISGTTCCCAKETVEEEIKNATILLKEGLQFFKPYTDASLQSI SKRDPPPLQQMYDLINKLAPLLNLDATITWDLVCNFVSYEYRNCAETFASQLSDLTSIRV LIDDIWNFYYSERVTLIKCLKLMIEYKDNERHPYHKEFGKFFNEILMGNLFESIRKQIEA LKFVNSPTRSQFCTEDHLHQLYNSTLIEMRELLHILTVIVHDVHMPSYEFAKFYGSIRGE PRRLVSTKSHEDKEAITKKIEEIQYSQIALLLVTLDVDKYTYMDEWINDVRSNMQDVFEH KCVRENSPQDGPLLLSWMLANYAIDPDNIDTLNRFKPFGIKAIQLDVFEYLRDLINCEMF QEETYYAEVVRSSVYNLLSLMCAFVDEDRLSALNGIFDALAAVVKFPECAARFWANPSDS IWSIYKVAKELYPYKFEPLTKIAIGLASTTITSAKKIASELNNLQSLTIEVPRQRDCNKP LQPYKADCIIQENSFTITSNCIRENITVLSNEKELVLFRTKANYWNALHHKIEQLFSQAS HGITNISMVNGNLLENVRLGLKLLEALLAKDIEIPSSMVAPTELSFEIINRFSYSALPTN LYKIVAVCISISSKLVLRYPEDILSRTRSGVYPKFNNWNQKPLYFAEAISFDGGLIASWL SGIETIEHTYPILCAFLDTLYNYLIAKHSKEAMYTIEIPGMVFLLQAVLPKLDSWYFESN AERIDLWLKSMFCIHRSLDSTLPKDDIRNELQLVVVYSLLYLEPRHALLKLLRTGERTLH NKMISETNWINGKGFKTIKSVELALSIVNRLLMFRKSLGLELGDRSPLEIALYSSPRVPN GLLIVPTIVNYLYVWFSPSLQKMAVRLLKKFAEEFSMSLLVCMGMDGTSIRETFAFRLTL PTCAIEVKVAILELVAVCLEKQPGLTEALFNIMHQAERKRIFPRPADEFLTEGCSQFLDS YLERMYKEDDIVCDKLYDSTMTVLRAMWYYRNEILVNFFRKREKFWSHLFAPLFKTLVAG AKGYSQLLDVITLELYKSPLLENNFSKSLKELLDKSKDHWKKLAMYVLDVPANNENEKEQ HTKQDRLIEPLYEINLESWYHFIVMLTDDRTAKNYPINVTQAHLLTQLALDSLLERVKEP NDSSSGKIPMLLASLSLRCITSWKQMCVGDSRIFKTRLSQLTQEIAQTYRGFGKALRQTM ISLLLGCVQLVKSTLAEDSASLEYLLAHSCTIAIYELEELKKAALQLEQRKQQFSVTLNT DEKDTQKKADCHSTETLRGIRESLPATLAISMVTQLLRSYVERNANFKHRLRASCVQLRQ MIPELMVCVGYTLQKYPYLKFSAAALSLLGVISRSPYCLYPINDNDIAKLWLSLIPPADI SNSMLDSLYDDSVNGQWRCQDWWPLYTLGLEFLIGLVSSETHMMFVNHVVVFLNSHEHQL MVVSTLLRHTADLLAADLIQSLVALIHATATQTYIWNAIQPSVRETLIKCMYLAYDSTVN LLLRPRILKFIIDGISVESAEELESCDSRLPSGELKLLVNKLIVINTTCALSFVHFSPKL NTLVDTIYTQDYWYTPMAEMNFGPPQMSMSSGPRLTYGTIISSTQLFTQALHSRSQPVAA SLPVSSMSQPGREDKTDSAKKEWERAAPENLRRMHTSKDLRRIIHAASGSTSRTSSNIGG EFLGYVSGLDVTVPLLSSPRLVRRPYDPLICENTILSRATALATGRHVTKSSSGAAGAPG NGSPIISRNHRFSDPWFESMDENNTRLALEINLILILSQALEGVKSPRLALRDRQLIARE TATELGVFFDFLEHRGTPDIWQVKGSLIDADTRSSRTIQDTSDPTQTNLPARLQKNSTID KAPVCLPDHENSSMEINRIEIQEKRLDDSVLTTGVFKTNVSSVQFLPLMGKLLKTVVESL DSAQFR NT seq 5781 nt NT seq  +upstreamnt  +downstreamnt atggaagtagctccaatgggcaatttgccttgtagcaaagatttatggtctatcatatct ggtacgacatgctgttgtgctaaagagactgtcgaagaggaaataaagaatgctactatt ttacttaaagaagggcttcagttttttaagccctatacagatgcatcgttacaaagcatt tctaaaagagatccacctcctctacagcaaatgtacgatttgattaataaacttgctcca ctccttaacttggatgccacaattacctgggatctagtatgcaattttgtgtcgtacgaa tacagaaattgcgcagagacctttgcatcacagctctcggatcttacttctataagagta ttaatcgatgatatttggaatttttattactctgagagagtgaccttgataaaatgcctt aaacttatgattgaatataaagataatgaaagacatccttatcacaaagaatttggaaag ttttttaatgagattctgatgggaaatttatttgaatctatacgaaaacaaatagaagca ttgaaatttgtcaactctcctacacggtcgcaattctgtacagaagatcatttacatcaa ttatacaatagcactttaattgaaatgcgtgagctacttcatatattgactgtgattgta catgatgtacatatgcctagttatgaatttgcaaagttttatggtagcattaggggagaa cctagacgattagtcagtacaaaaagtcatgaagataaagaagctattactaaaaagatt gaagagatacagtacagtcagatagcactattacttgtaacattggatgtagacaaatac acttatatggatgagtggataaatgatgtcagaagtaatatgcaagatgtttttgaacat aaatgtgttcgtgaaaattcaccacaagatggaccgttactcttgtcgtggatgctagca aattatgcgattgatccggacaatatagacacgttaaatcgtttcaaaccgtttggtatt aaagctatacaacttgatgtatttgagtatctgcgagatttgataaattgcgaaatgttt caagaagagacctattatgctgaagttgtgcgaagcagcgtttacaatcttctctccttg atgtgcgcctttgtcgacgaagatcgattaagtgctttaaatggtattttcgatgctctg gctgccgtagtcaagtttccagaatgcgcagctagattctgggctaatccatctgacagt atatggtcgatttataaagttgccaaagagttgtatccttacaaattcgaaccattaacc aagatagctattggtctggcatccacaacaattacgagtgctaaaaagattgcatcggag ttgaataatctacaatcactgaccatagaggttcctcgccaaagagattgtaataagcca ttacagccatacaaagcggattgtataattcaagagaactcatttactataactagcaac tgcatacgcgagaatattaccgtgttatctaatgagaaagaactagtattgtttcgtaca aaggcaaattattggaacgctttgcatcataaaatagaacagttattttctcaagcaagt catggaattacaaatatcagcatggtgaatggtaatttactagaaaatgttcgtctaggc ctaaaattgttggaagcattattggctaaagatattgagataccatcgagcatggttgct cccacagaattaagtttcgaaattattaatcgattttcatattcagcactaccaacgaac ttgtataaaattgttgctgtatgcatcagcatttcatcaaaattggttttgagatatccc gaagacatcctttcgcgaacgcgatccggtgtttatccaaaatttaataattggaatcaa aaaccattatattttgcggaagctatttcctttgatggtggtctcatcgcgtcgtggctg tcaggaatagaaaccatcgaacatacgtatcccattctgtgcgcgtttctagataccttg tataattatctaatcgcgaagcatagtaaagaggccatgtacactatcgaaataccgggt atggtatttctgttacaagctgtgttacctaagctggactcgtggtatttcgaatcaaac gcagaaagaatcgatttatggctgaagagtatgttttgtattcatcgatctctggattca actttacctaaagatgacattcgcaacgagttacagcttgttgtagtatatagtctactt tatttagagccacgtcacgcactgctgaaattacttcgaacaggcgagcgcacattgcac aataaaatgatctcggagacaaattggatcaatggaaaaggattcaaaactatcaaaagt gtagaactagctctgtcgatagtcaatcgattattaatgtttaggaaatctctgggtcta gaacttggcgacagatcacctctcgaaattgctttgtactcctctccgagagtacctaac ggacttcttatagtaccaacaattgtcaattatctgtatgtttggtttagcccttcgttg cagaaaatggctgtaagattactgaagaaatttgcggaggaattttccatgtctttgctc gtttgcatgggaatggacggaacatctatacgagaaaccttcgcatttcgattaactcta ccaacatgcgcgattgaagtcaaagtcgctattttagaattagttgctgtgtgtctggag aaacaacctggcttgacggaagctctcttcaacatcatgcatcaagcagaacgcaagaga atcttcccacgtcctgccgacgaatttcttactgagggttgcagtcaattcttggactca tatttagaacgaatgtacaaagaagatgacattgtgtgtgataaactgtacgatagcaca atgacagtattgcgcgctatgtggtattatagaaatgagattcttgtcaatttctttcgg aagcgagagaaattctggagtcatttattcgcgccactttttaaaactttagtggcgggt gcgaaaggttattctcaattgttagatgtaattacattggaattatacaaaagcccgtta ttagagaataatttttcaaaaagtttaaaagagctgttggacaaatctaaggatcattgg aaaaaattagctatgtatgttctcgatgttcctgcaaacaatgaaaacgagaaagaacag catacaaagcaagacagactcatagaaccactgtacgaaattaatttagaatcttggtat cactttatcgttatgctcaccgacgatcgaacagcgaaaaattatccgattaatgtaaca caggcacatctcctaactcagttggccttggattctctactggagcgagtgaaggaacct aatgattctagtagtggcaagattccgatgttattggcttctttatctctgagatgcatc acatcctggaaacagatgtgcgtcggcgactcgaggatttttaaaaccagactatcgcag ctgacgcaagagatagcgcaaacttatcgcggttttggaaaggctctacggcagacaatg atatccttacttcttggatgcgtgcaattggttaaaagtactttagccgaagattcggca agtctggaatatcttttagctcactcttgcacgatcgctatttatgaactagaagaattg aaaaaagctgcccttcaattggaacaacgaaaacagcaattctctgtcactctcaatact gacgagaaagatacacaaaagaaggctgattgtcacagcacggagacactccgtggtata cgagagagtctaccggcaacgttagctatcagtatggtgacgcaattgttacgatcgtac gttgaacggaatgcaaatttcaagcatcgtctaagagctagttgtgtgcaacttcgtcag atgatacctgaattgatggtatgcgtcggttatactcttcaaaaatatccatatctgaag tttagtgcagcagctctgagcttgttgggcgttatatcgcgttcaccgtattgtctatat cctattaacgataatgatatcgcgaaactctggctgagcttgattccaccagcagacatc tccaatagtatgctcgactcattgtatgatgattcggtaaatggtcagtggcgttgccag gattggtggccgttgtacacactgggcttggaatttctaataggcctggtcagcagcgag acgcacatgatgtttgttaatcatgtggttgttttcttaaattctcacgaacatcaatta atggtggtatccacattattgaggcacactgccgatctgctagccgccgatctaattcaa tcactggtcgctcttatacatgctacagccacgcaaacatatatttggaatgcaattcaa ccaagtgttcgcgaaactcttattaaatgtatgtatttggcatacgatagtacagtgaac ctattgctgaggccgcggatacttaaattcatcattgacggtatcagcgtggagagtgcc gaagagctcgagtcttgcgatagtcggttacccagtggtgaattgaaattgttggtgaac aaactgattgtcataaatacaacctgcgcgttaagcttcgtccacttctcgcccaaattg aacactctagtagatacgatatatactcaggattattggtacacgccgatggccgagatg aactttgggcctccacaaatgagcatgagctccggtccgcggcttacttatggtacgata atcagctcgacgcagctgtttacccaggctcttcactctcgttcgcagcccgttgctgct tcattacccgtgtcttcaatgtcacagcctggacgtgaagacaaaacggattctgcaaaa aaagaatgggaacgtgccgcgccagaaaatcttcgtcgcatgcatacgagtaaggattta cgacgaataattcacgcggcttctggttcaacttctagaacgtcatctaacattggcgga gaattcctagggtacgtcagtggtctagatgtcaccgtgccattacttagcagccctaga ctcgtgcgtcgaccctatgatccattgatatgcgaaaacactattctttcaagagcaact gctttggcaactggtagacatgtcacgaagagtagcagtggagctgctggcgctccgggc aacggtagcccaatcatatcaagaaatcacagatttagtgatccatggtttgagtccatg gatgagaataatacacgattggcattggaaatcaatcttatcctgatattgtcacaggct ctggaaggagtgaaaagccccaggctcgctttacgagatcgtcagctcatagcgcgggag accgctaccgaattaggagttttctttgattttctcgaacaccgaggtactcccgatatc tggcaagtaaagggttccttgatagatgcagatacaaggagttccaggacgattcaagat acgagtgatccgacgcaaacaaatttaccagcaagacttcaaaagaacagtactattgac aaagcaccagtgtgcttgcccgaccacgaaaattcttcaatggagattaatcgaattgaa atacaagagaaaagacttgacgatagtgtcctcaccactggcgttttcaaaacgaatgtc agcagtgtacagtttttaccattaatgggaaaattacttaagacagttgttgagtcgttg gactcggcacaattccgataa

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