Cyphomyrmex costatus: 108779894
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Entry
108779894 CDS
T11118
Name
(RefSeq) LOW QUALITY PROTEIN: trithorax group protein osa
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108779894
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccoa03000
]
108779894
03021 Transcription machinery [BR:
ccoa03021
]
108779894
03036 Chromosome and associated proteins [BR:
ccoa03036
]
108779894
Transcription factors [BR:
ccoa03000
]
Eukaryotic type
Helix-turn-helix
ARID
108779894
Transcription machinery [BR:
ccoa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108779894
Chromosome and associated proteins [BR:
ccoa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108779894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
108779894
NCBI-ProteinID:
XP_018402929
LinkDB
All DBs
Position
Unknown
AA seq
2139 aa
AA seq
DB search
MAATQAESQQNDVKLNESVKCAQKRTQVGGNSASASAKQQLDSEPDDKVSRGAAQLLKYV
SRGGDTTGYEMSQYREDIGGHPAAGEVKSPREAGQTSQEPVGKQEAHDAPGHPGHPGHPF
APNVIRDYSDEYSNNKSGEFAATKSLADYPPGKQLPEYVAKHADFPGKQLDYHGKHLMHE
SDRTHRAEMEEHYSASKIESRLYVGASSGNFPGQPRFLSGQGMSQTAGPTPTLNQLLQAS
TPVHRFHGNYPGMGPEYQQPWPMQRPPVVPPVYPQPSQRPPQTGSPRLHTGPGAQSSPTP
MQYQQYTQRYSSPTRPHAPYSHHQLNSYTTQTSHPSSLYTEQRGWNQGGPPNPPPPPSNQ
VTPSGQSPQRALSQSPAPPPAASPQPQATSQTQVFHNIQQRATTPNTQGIDSGELSGQNS
NDSSNGPACPGTPNSQGMRPTPSPTGSTGSRSMSPAVGQQNVQMPPRPSSSQSDSSGPAP
RMSHSPMTTQGAYQQPLGPSPHMHSYKMNSTGPGVVQPGPGSTALGGISPMGGGMGYAAG
GTAAGQPGGYHAQSTYPPPRPHMQFPQGYPTPANSQPPPNNQYQPPNRPNNLVQYPPYTH
KMGFNSVPPGMPPSPGPPQVYGAGGATAMVPPGAPGVVPVIGNMGPPASSMGPPPPSPNH
ISNQPPPPTSSAVPHLHTPAATPPLNHEGSPMPPPSTTPNSHPASAPTPTSHNSADLTAE
TSNDSGITTTASGTSAINVISTSSGTVTSVITTGPDGTSLDEGSQQSTLSNASAASGEDP
AFTPKVRKEMIGGYHSHPATPQSTVPSPGAASINSIHEEYSDMNSPGWPRTPASPVFNSH
VPQDPYRSKKTDSLAKLYEMDESLERRSWLDKLVNFMEERRSPITSCPTISKNPLDLFRL
YLYVKERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGG
VDPQPIINQVEAGSKKKGSKGTASVPSPGSSNSQDSFPAAGSSNASMDGYGSYQGSYAGG
TPGGPSSEYTPPPPRPPSQSSAPSAHQGIQQGTYQNTGSYQNYPQEQYIRPQGNAMSQQA
EFNQPYSPRSHYPPYVPDVDRGYPGGNMPPNNATGQDMYNRYTSGQQGPASYPTATPPNA
RTNSYPAGPQPHPATVQQQTATSQPSSPSQPPTVSSYSCPQDYYRQEQSGYGAPAGTQIY
TASGSANKNMPPPPPGPTQPRRHPDFAKDQQYPQYNQQRPAYPGWPNTTNQYNSNSGNNR
VQYPSQQAPSPSQQPQPQPPQQVTQVVTAAPTAPAVGGMVASSQQWASQPSNRSTPQPSL
NAIAHPPPPWDHRYTNQPSPLYPAPGNHQTQLGVSPMISQQPTSKREMTFPPDSVEAITP
LLYKRRKLTRADVAPVEAWRIMMALRSGLLAESCWALDVLNILLFDDSSVSYFGLTHLPG
LLDVLLEHFSRSLSDMFESCVNDDDRYCQAADGPEVDLGAVTRPIDSEDRTKLLSTSNYT
YLSRRGRPVKIVPRDDDLFVLDTRRPWDHQECESETEPWQVDTNATKYIVTCFQSEMGSV
PFARLLRDEKPPLLQKEVDSTDLKDEAKADSVGGVHETLDFTHKSGELGDKQSNKDSGER
KQQQQLDKKKKTKTLSDVLSRIKKEPVEMNDLTRELFEKKNDGFKKDCDSEVTKANNNMG
EHFGSDMSKNDEDSLPTQNGLNESVATVSGNIDNTIDKTEIKTETTDEHELITTRDDREG
PRLQIRDPAGTLKRRRISDYEDESYSRDEASLYLVTETQDNLARRCVCLSTILRNLTFIP
GNEAEFAKNVTFLSLLGKLLLLHHEHPIRAQKTRNYDREEDADFADSCSSLQGEGEWWWD
FLHHVRENVLVMAANISGHMDLSQHPEEISRPVLDGLLHWAVCPAAHGQDPFPTVGPNSS
LSPQRLALEALCKLCVTECNVDLVVATPPYSRLQRLCSVLTRLLCRSEEQVLREFGVNLL
HFLSAADSGVARTIALQTPCVALLVAFIEQAETSALGVANQHGLAALRDNPESMGTSLDM
LRRAAGTLLNLARHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQCSRARNSLS
SVGTLVRDSRGLLLTVPTVTTTTSKTHVTTTMLWTAIVR
NT seq
6420 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcaagccgagagccaacaaaacgatgtgaagctgaacgagtccgtgaaa
tgcgcacagaagcgtacgcaagtcggtgggaatagtgcgagtgctagtgcgaagcagcag
ctggattccgagccggacgataaagtgtcccggggcgcggcccagctgcttaaatatgtg
agtcgcggcggggacacgacgggctacgagatgagtcaataccgcgaggacattggcgga
caccctgccgccggtgaggtaaaatcgccgcgtgaggccggccagacgtcccaggagccc
gtcggcaagcaagaggcgcacgacgcgcccggccatcccggccacccgggccatccgttc
gcgccaaacgtgatacgcgactactcggacgagtacagcaacaacaaatccggcgagttc
gccgcgaccaagtcgctcgctgactatccgcccggtaagcagctcccggagtacgttgcc
aaacacgcggactttcccggcaaacagctcgattatcatggtaaacacttgatgcacgag
tccgaccggacccaccgggccgagatggaggagcactactccgcctccaagatcgagtcg
cgattgtacgtcggtgccagctccggcaatttccccggtcagccaaggtttctctccgga
cagggcatgtcccagaccgctggtcctacgcctacgttgaaccagttgctgcaggcgtct
actccagtgcatcggtttcatggaaattatcctggaatggggcctgagtatcagcagcca
tggcctatgcaaaggccaccggttgtgcctccagtttatccacaacccagtcagcgtcct
ccgcagacgggttcaccgagattacatacagggccaggagcacagagttctccaacaccc
atgcaatatcaacaatatacccaacgatattcttcacctacgagacctcacgcaccttac
agtcatcatcagttaaactcttatacgacgcaaaccagtcatccttcaagcttatatacg
gaacaaagggggtggaatcaaggtggtccaccaaatccacctccaccgccaagtaatcag
gtcactccatcgggtcagtcaccacagcgtgctttgtctcagtctccagctccaccacct
gctgcgtcaccgcaaccacaagctaccagtcagacccaggtttttcacaatatacaacag
cgagctacaacaccaaatactcaaggaattgattctggggaattatcaggacagaatagt
aacgacagttcgaatggaccagcttgtccagggacaccgaactctcaggggatgagacct
accccgtcacctacaggatccacaggttctcgctcgatgtcccctgctgttggccaacaa
aacgttcagatgcctccacgtccgtcgagtagccagtcggatagtagtgggccagcaccg
cgcatgagtcactctcctatgaccactcaaggagcgtaccaacaaccattgggtccttca
ccacatatgcatagctacaaaatgaatagcactggtcctggtgtagtgcaaccgggacct
ggttcgacggctctcggtgggattagtccaatgggtggtggaatgggttatgcagctggt
ggaacagctgcgggtcagcctggaggttatcatgcacaatctacgtatccacctcctcgt
cctcatatgcagtttccacagggatatccaacgcctgcgaactcgcaaccgccacccaac
aatcagtatcagcctcccaacagacctaacaacttagtacaatatccaccgtacacgcat
aaaatgggctttaatagtgtaccgccgggaatgccaccgagtccgggaccgccgcaagtt
tatggtgctggtggtgctaccgcgatggtaccgccaggcgctccaggagtagtacctgtc
attggtaatatgggaccgccggcgagctcgatgggtccgccaccaccgtctcctaatcac
ataagtaatcaaccaccaccgcctactagctcggcggtaccacatttacatacgccggca
gctacaccgcctctcaaccacgagggtagtccaatgccaccgccgagtacaacaccgaat
tcacaccccgcgtcagcaccaacccctaccagccacaattctgcagatctcacggctgag
acttccaacgacagcggtataactacgactgcttcaggtacgtcagctataaatgtcata
tctacttcgagtggtactgtgacgtctgtaataacaacaggtccagacggtacgtctttg
gatgaaggttcgcagcagtcaacgttatctaatgcatcagctgcatctggtgaagatcca
gcatttacaccaaaagtgcggaaagaaatgataggaggataccatagccatcctgcgaca
ccacagagcactgttccgtctcctggcgctgctagcattaattcgattcacgaggaatat
tctgacatgaacagccctggttggccacgtactcctgctagtcctgtgtttaacagtcat
gtgcctcaagacccatacagatctaagaagacagatagtctggcaaagttatacgaaatg
gacgaatcgctagaacgaagaagctggctggataagctagtcaacttcatggaagaacga
agatcaccgatcaccagctgtcctaccatctccaagaaccccctcgatctatttcggctt
tacctctacgtgaaggagagggggggcttcatggaggtatgcaaggtgacgaaaaacaag
acgtggaaagatatagctggtctgttgggaatcggtgctagcagtagcgctgcttacact
ttgcgcaagcattatacgaaacatctgctggcatatgagtgccacttcgatcgtggcggt
gtggatccgcaacccattattaatcaggtcgaagcgggttcaaagaagaagggatctaag
ggaactgcttccgtaccatcgccgggttcttccaattctcaagactcctttcccgctgct
ggatcaagcaatgcttctatggacggttatggaagctatcagggtagttacgcaggcggc
acacccggtggtccatcgtcagaatatacgccgccaccgcctaggccacccagccaaagc
agcgcaccctctgctcatcaagggatacaacaaggcacttaccaaaacacgggctcctat
cagaactatccgcaagagcagtacattcggccgcagggaaacgcgatgtctcaacaagca
gagttcaatcaaccatactctcccagatcacattatcctccatacgtaccggatgtcgac
aggggatacccgggtggtaacatgccgccgaacaacgctactggacaggatatgtacaac
agatacacaagcggtcaacagggtcccgctagttatcccacggcaacacctcctaacgcg
cggaccaacagctatcctgcgggaccgcagcctcatccggccactgtgcaacagcaaacg
gcgactagccagccttcctcgccctcacaaccaccaactgtgtcgtcatactcgtgtcca
caagactactatcgacaggaacaaagtggatacggagcgcctgctggaactcaaatatat
actgcaagcggatcggctaacaagaacatgccaccaccccctccaggtcccactcaacct
agacgccacccagattttgccaaagaccaacagtatccccagtataatcaacaacgacca
gcgtatccaggatggccaaatacaactaatcagtacaatagtaatagtggaaacaatagg
gttcaatacccaagccagcaggcaccatcaccatcacaacaaccacaaccacagccaccg
caacaagtaacccaagtcgttaccgctgccccaactgctccggcagttggcggtatggtg
gctagtagtcaacaatgggccagtcagccatcgaataggtctacacctcaaccatctcta
aatgctatagcgcatccacctccaccgtgggatcatcgctacacgaatcaaccgtcccct
ttgtatccagcacctgggaatcatcagactcaactcggagtaagtcccatgatcagccag
caaccgacgtcaaagagagaaatgacattccctcctgacagcgtagaagcgatcacgcct
cttttgtacaagcgacgaaaactgacacgcgctgacgtggcaccagtagaagcttggcgc
atcatgatggctttgagatcgggtctgctcgctgagagctgctgggcccttgatgtatta
aacattttgttattcgatgactcttctgtaagttatttcggattgacacacctacccgga
ctactggacgttctgctggaacacttctcgcgttctctctccgacatgttcgaatcatgt
gtaaacgacgacgatcgctattgccaggctgcagatggtccggaggtagacctcggtgca
gtaacgcgcccaatcgattctgaagatcggacgaaattgctgtcgacatcgaattatacg
tatctctcgaggagaggtcgccccgttaagatcgtccctcgggatgacgatttgttcgtt
ttggacacccggaggccttgggatcatcaggagtgcgaatcggaaaccgagccgtggcaa
gtcgacacgaacgcgaccaaatacatcgtcacgtgttttcagtcagagatgggctcggtg
cctttcgcccgtttattaagggacgagaaaccgccgttgttacaaaaggaagttgacagc
acagatttgaaagacgaagccaaagcggatagcgtcggtggtgtccacgagacgctagac
ttcactcataagtctggtgagcttggcgacaagcaatctaataaagacagtggcgaacgt
aagcaacagcaacagctagacaagaaaaagaagacgaaaactttgagtgacgtactgtcg
aggatcaagaaggaacctgtggagatgaacgatcttacaagggagctgttcgagaagaag
aacgacggttttaaaaaggattgcgacagcgaagtgacgaaagcaaacaataatatgggt
gaacattttggcagtgatatgtcaaagaacgacgaggactcgttgccgacgcaaaatgga
ctgaatgaatcggtagcgacggtttcaggcaacatcgataacaccattgataaaactgag
atcaagacagaaacaacggacgaacatgaactgataacgacgagagacgatagggaggga
ccaagattacaaataagagatccggcaggtacgttaaaacgacggaggataagtgactac
gaggacgaaagttactcaagggacgaagcgagtctgtacctggtgacggaaacgcaggac
aacctggctcgtcgttgcgtgtgcctgtcgacaattctaaggaatctcactttcatcccc
ggcaatgaagcggaattcgcgaagaacgttacgttcctcagtctactaggcaagttattg
ctgctacatcacgaacatccgatacgggcgcaaaagacacgtaattatgatcgtgaagag
gacgcggatttcgcagactcgtgtagcagtctacaaggcgaaggtgaatggtggtgggac
ttcctccatcatgttagggagaacgttctcgtgatggccgccaatatatccggccatatg
gatctgagccagcatccggaggaaatctcgcggccagtgctcgatggccttcttcattgg
gccgtatgtccggctgcgcatggtcaggatccgtttccaacggtcggcccgaattcctcg
ttgtcgccgcagagactcgcgcttgaggcattgtgcaaattatgcgtgaccgagtgcaac
gttgatctggtggtggcgacgccgccgtactcacgattacagagactatgctcggtgctg
actaggctcctctgtcgcagcgaagaacaagtgctgcgcgagttcggcgtgaatctattg
cacttcctgtcggccgcggacagtggcgtcgcgcgtaccatcgccctacaaacgccatgc
gttgcgctgctcgtcgcgttcatcgagcaggccgagacaagcgcactcggcgtcgctaat
cagcacggtctcgcggctctacgcgacaatcccgaatcgatgggtaccagtcttgacatg
ttgcgacgtgcggccggcacgctgctcaacctcgccaggcatccggataaccgaactctc
cttctgcagcacgagtcccgcctgctcgccttggtgatgagccagatcctggatcagcag
gtcgccgcgatagtcgcgcgtgtgttgttccaatgttcgagggcacgtaactctctgtcg
tcggtcgggacactagtacgcgattcgcgcggattattattaacggtgccgacggtgacg
acaacaacgagtaaaacgcacgtgacgacgacaatgttatggacggctatagtgcgttaa
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integrated database retrieval system
